RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 TACC2O95359 2948 aa12.45□□□□□ -0.42
SFXN1-201ENST00000321442 KRTAP10-9P60411 292 aa12.45□□□□□ -0.42
SFXN1-201ENST00000321442 CHD6Q8TD26 2715 aa12.45□□□□□ -0.42
SFXN1-201ENST00000321442 HOXD3P31249 432 aaPredicted RBP12.44□□□□□ -0.42
SFXN1-201ENST00000321442 CLEC2BQ92478 149 aa12.44□□□□□ -0.42
SFXN1-201ENST00000321442 RNF183Q96D59 192 aa12.44□□□□□ -0.42
SFXN1-201ENST00000321442 U3KQK5 164 aa12.44□□□□□ -0.42
SFXN1-201ENST00000321442 TNRC6BQ9UPQ9 1833 aaKnown RBP12.44□□□□□ -0.42
SFXN1-201ENST00000321442 KALRNO60229 2985 aa12.44□□□□□ -0.42
SFXN1-201ENST00000321442 Q6ZUT4 128 aa12.44□□□□□ -0.42
SFXN1-201ENST00000321442 DCHS1Q96JQ0 3298 aa12.43□□□□□ -0.42
SFXN1-201ENST00000321442 SIRPDQ9H106 197 aa12.43□□□□□ -0.42
SFXN1-201ENST00000321442 LAMTOR3Q9UHA4 124 aa12.43□□□□□ -0.42
SFXN1-201ENST00000321442 TINCRA0A1B0GVN0 87 aa12.42□□□□□ -0.42
SFXN1-201ENST00000321442 DMDP11532 3685 aa12.42□□□□□ -0.42
SFXN1-201ENST00000321442 A0A096LNJ9 63 aa12.42□□□□□ -0.42
SFXN1-201ENST00000321442 NEXN-AS1Q8NBZ9 246 aa12.42□□□□□ -0.42
SFXN1-201ENST00000321442 TIMM17AQ99595 171 aa12.42□□□□□ -0.42
SFXN1-201ENST00000321442 GATA3P23771 443 aa12.42□□□□□ -0.42
SFXN1-201ENST00000321442 APRG1Q8IVJ8 170 aa12.42□□□□□ -0.42
SFXN1-201ENST00000321442 INAFM2P0DMQ5 153 aa12.41□□□□□ -0.42
SFXN1-201ENST00000321442 HHLA3Q9XRX5 114 aa12.41□□□□□ -0.42
SFXN1-201ENST00000321442 ICOSQ9Y6W8 199 aa12.41□□□□□ -0.42
SFXN1-201ENST00000321442 U3KQE9 123 aa12.41□□□□□ -0.42
SFXN1-201ENST00000321442 BAALC-AS2P0C853 105 aa12.4□□□□□ -0.42
SFXN1-201ENST00000321442 P0DMU3 169 aa12.4□□□□□ -0.42
SFXN1-201ENST00000321442 FAM231AP0DMU4 169 aa12.4□□□□□ -0.42
SFXN1-201ENST00000321442 FAM231CP0DMU5 169 aa12.4□□□□□ -0.42
SFXN1-201ENST00000321442 PTPRBP23467 1997 aa12.4□□□□□ -0.42
SFXN1-201ENST00000321442 UFSP1Q6NVU6 142 aa12.4□□□□□ -0.42
SFXN1-201ENST00000321442 C20orf173Q96LM9 149 aa12.4□□□□□ -0.42
SFXN1-201ENST00000321442 IGSF10Q6WRI0 2623 aa12.4□□□□□ -0.42
SFXN1-201ENST00000321442 C10orf99Q6UWK7 81 aa12.4□□□□□ -0.42
SFXN1-201ENST00000321442 IGHV3-30-3P0DP02 117 aa12.39□□□□□ -0.43
SFXN1-201ENST00000321442 A0A0J9YY99 117 aa12.39□□□□□ -0.43
SFXN1-201ENST00000321442 LY6LH3BQJ8 138 aa12.39□□□□□ -0.43
SFXN1-201ENST00000321442 ZFAND3Q9H8U3 227 aa12.39□□□□□ -0.43
SFXN1-201ENST00000321442 C20orf203Q8NBC4 194 aa12.39□□□□□ -0.43
SFXN1-201ENST00000321442 TEX49A0A1B0GTD5 131 aa12.38□□□□□ -0.43
SFXN1-201ENST00000321442 C11orf71Q6IPW1 123 aa12.38□□□□□ -0.43
SFXN1-201ENST00000321442 NRACQ8N912 160 aa12.38□□□□□ -0.43
SFXN1-201ENST00000321442 ODF3BA8MYP8 253 aa12.38□□□□□ -0.43
SFXN1-201ENST00000321442 TMEM243Q9BU79 118 aa12.38□□□□□ -0.43
SFXN1-201ENST00000321442 SLURP1P55000 103 aa12.37□□□□□ -0.43
SFXN1-201ENST00000321442 HERVK_113P63121 156 aa12.37□□□□□ -0.43
SFXN1-201ENST00000321442 ZFAND2AQ8N6M9 145 aa12.37□□□□□ -0.43
SFXN1-201ENST00000321442 FSTL3O95633 263 aa12.37□□□□□ -0.43
SFXN1-201ENST00000321442 PRR9Q5T870 116 aa12.37□□□□□ -0.43
SFXN1-201ENST00000321442 VPREB3Q9UKI3 123 aa12.37□□□□□ -0.43
SFXN1-201ENST00000321442 CLPSL2Q6UWE3 100 aa12.37□□□□□ -0.43
SFXN1-201ENST00000321442 A0A096LPF7 62 aa12.36□□□□□ -0.43
SFXN1-201ENST00000321442 SOCS3O14543 225 aa12.36□□□□□ -0.43
SFXN1-201ENST00000321442 RAI1Q7Z5J4 1906 aaPredicted RBP12.36□□□□□ -0.43
SFXN1-201ENST00000321442 FAM236AA0A1B0GUQ0 79 aa12.36□□□□□ -0.43
SFXN1-201ENST00000321442 FAM236BA0A1B0GV22 79 aa12.36□□□□□ -0.43
SFXN1-201ENST00000321442 C5orf38Q86SI9 138 aa12.35□□□□□ -0.43
SFXN1-201ENST00000321442 SLC25A29Q8N8R3 303 aa12.35□□□□□ -0.43
SFXN1-201ENST00000321442 PIFOQ8TCI5 191 aa12.35□□□□□ -0.43
SFXN1-201ENST00000321442 LAMA5O15230 3695 aa12.35□□□□□ -0.43
SFXN1-201ENST00000321442 LINC01619G3V211 115 aa12.35□□□□□ -0.43
SFXN1-201ENST00000321442 TRBV10-2A0A0K0K1G8 114 aa12.35□□□□□ -0.43
SFXN1-201ENST00000321442 IGHG4P01861 327 aa12.35□□□□□ -0.43
SFXN1-201ENST00000321442 Q6ZS46 218 aa12.35□□□□□ -0.43
SFXN1-201ENST00000321442 ATP6V0E2Q8NHE4 81 aa12.34□□□□□ -0.43
SFXN1-201ENST00000321442 H3BUA1 57 aa12.34□□□□□ -0.43
SFXN1-201ENST00000321442 NOP10Q9NPE3 64 aaKnown RBP12.33□□□□□ -0.44
SFXN1-201ENST00000321442 AVPP01185 164 aa12.33□□□□□ -0.44
SFXN1-201ENST00000321442 SPANXA1Q9NS26 97 aa12.33□□□□□ -0.44
SFXN1-201ENST00000321442 LRBAP50851 2863 aa12.33□□□□□ -0.44
SFXN1-201ENST00000321442 MRPS12O15235 138 aaKnown RBP12.32□□□□□ -0.44
SFXN1-201ENST00000321442 A0A0J9YXY3 114 aa12.32□□□□□ -0.44
SFXN1-201ENST00000321442 LGALS9O00182 355 aa12.32□□□□□ -0.44
SFXN1-201ENST00000321442 IGHG2P01859 326 aa12.32□□□□□ -0.44
SFXN1-201ENST00000321442 CLUHP3Q96NS8 147 aa12.32□□□□□ -0.44
SFXN1-201ENST00000321442 XGP55808 180 aa12.31□□□□□ -0.44
SFXN1-201ENST00000321442 IGHV4OR15-8A0A075B7B6 117 aa12.31□□□□□ -0.44
SFXN1-201ENST00000321442 A0A087WW49 117 aa12.31□□□□□ -0.44
SFXN1-201ENST00000321442 IGKV3D-7A0A0C4DH55 119 aa12.31□□□□□ -0.44
SFXN1-201ENST00000321442 A8MZ25 164 aa12.31□□□□□ -0.44
SFXN1-201ENST00000321442 ELANEP08246 267 aa12.31□□□□□ -0.44
SFXN1-201ENST00000321442 MED14OSP0DP75 135 aa12.31□□□□□ -0.44
SFXN1-201ENST00000321442 HAMPP81172 84 aa12.31□□□□□ -0.44
SFXN1-201ENST00000321442 SS18Q15532 418 aa12.31□□□□□ -0.44
SFXN1-201ENST00000321442 TRBV7-3A0A075B6L6 115 aa12.31□□□□□ -0.44
SFXN1-201ENST00000321442 A0A0J9YX75 114 aa12.31□□□□□ -0.44
SFXN1-201ENST00000321442 DNAJC30Q96LL9 226 aa12.31□□□□□ -0.44
SFXN1-201ENST00000321442 OVOL2Q9BRP0 275 aa12.3□□□□□ -0.44
SFXN1-201ENST00000321442 TRAV13-2A0A0B4J235 113 aa12.3□□□□□ -0.44
SFXN1-201ENST00000321442 IGHV1-58A0A0C4DH39 117 aa12.3□□□□□ -0.44
SFXN1-201ENST00000321442 CFAP126Q5VTH2 177 aa12.3□□□□□ -0.44
SFXN1-201ENST00000321442 ZNF22P17026 224 aaPredicted RBP12.3□□□□□ -0.44
SFXN1-201ENST00000321442 XCL1P47992 114 aa12.3□□□□□ -0.44
SFXN1-201ENST00000321442 J3QLI3 93 aa12.29□□□□□ -0.44
SFXN1-201ENST00000321442 IGHV3-33P01772 117 aa12.29□□□□□ -0.44
SFXN1-201ENST00000321442 RNASE3P12724 160 aaKnown RBP12.28□□□□□ -0.44
SFXN1-201ENST00000321442 SMR3AQ99954 134 aa12.28□□□□□ -0.44
SFXN1-201ENST00000321442 CITED1Q99966 193 aa12.28□□□□□ -0.44
SFXN1-201ENST00000321442 SND1-IT1Q9HBX3 110 aa12.28□□□□□ -0.44
SFXN1-201ENST00000321442 NFE4Q86UQ8 179 aa12.28□□□□□ -0.44
SFXN1-201ENST00000321442 VSIG2Q96IQ7 327 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms