RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 CELSR3Q9NYQ7 3312 aa9.5□□□□□ -0.89
DNMT3A-202ENST00000321117 OVOL2Q9BRP0 275 aa9.5□□□□□ -0.89
DNMT3A-202ENST00000321117 TRIAP1O43715 76 aa9.49□□□□□ -0.89
DNMT3A-202ENST00000321117 DNAJC30Q96LL9 226 aa9.49□□□□□ -0.89
DNMT3A-202ENST00000321117 TSPEAR-AS2P59090 65 aa9.49□□□□□ -0.89
DNMT3A-202ENST00000321117 TMEM86BQ8N661 226 aa9.49□□□□□ -0.89
DNMT3A-202ENST00000321117 GHRHP01286 108 aa9.49□□□□□ -0.89
DNMT3A-202ENST00000321117 SLURP1P55000 103 aa9.49□□□□□ -0.89
DNMT3A-202ENST00000321117 C11orf68Q9H3H3 251 aaKnown RBP9.49□□□□□ -0.89
DNMT3A-202ENST00000321117 VPREB3Q9UKI3 123 aa9.49□□□□□ -0.89
DNMT3A-202ENST00000321117 USP9YO00507 2555 aaPredicted RBP9.49□□□□□ -0.89
DNMT3A-202ENST00000321117 TSHBP01222 138 aa9.48□□□□□ -0.89
DNMT3A-202ENST00000321117 CRYGDP07320 174 aa9.48□□□□□ -0.89
DNMT3A-202ENST00000321117 VSIG2Q96IQ7 327 aa9.48□□□□□ -0.89
DNMT3A-202ENST00000321117 TMEM243Q9BU79 118 aa9.48□□□□□ -0.89
DNMT3A-202ENST00000321117 RNF223E7ERA6 249 aa9.48□□□□□ -0.89
DNMT3A-202ENST00000321117 BAALC-AS2P0C853 105 aa9.48□□□□□ -0.89
DNMT3A-202ENST00000321117 NDUFV3P56181 108 aaKnown RBP9.48□□□□□ -0.89
DNMT3A-202ENST00000321117 TRBV30A0A0K0K1B3 111 aa9.48□□□□□ -0.89
DNMT3A-202ENST00000321117 C6orf226Q5I0X4 101 aa9.48□□□□□ -0.89
DNMT3A-202ENST00000321117 APRG1Q8IVJ8 170 aa9.48□□□□□ -0.89
DNMT3A-202ENST00000321117 DSPP15924 2871 aaKnown RBP9.47□□□□□ -0.89
DNMT3A-202ENST00000321117 ACYP1P07311 99 aa9.47□□□□□ -0.89
DNMT3A-202ENST00000321117 C9orf85Q96MD7 179 aa9.47□□□□□ -0.89
DNMT3A-202ENST00000321117 TINCRA0A1B0GVN0 87 aa9.47□□□□□ -0.89
DNMT3A-202ENST00000321117 CFHR3Q02985 330 aa9.47□□□□□ -0.89
DNMT3A-202ENST00000321117 SONP18583 2426 aaKnown RBP9.47□□□□□ -0.89
DNMT3A-202ENST00000321117 TRAV13-2A0A0B4J235 113 aa9.46□□□□□ -0.89
DNMT3A-202ENST00000321117 TMEM263Q8WUH6 116 aaKnown RBP9.46□□□□□ -0.89
DNMT3A-202ENST00000321117 PRO0461Q9UI25 63 aa9.46□□□□□ -0.89
DNMT3A-202ENST00000321117 USP9XQ93008 2570 aaPredicted RBP9.46□□□□□ -0.89
DNMT3A-202ENST00000321117 J3QLI3 93 aa9.46□□□□□ -0.89
DNMT3A-202ENST00000321117 DCANP1Q8TF63 244 aa9.46□□□□□ -0.89
DNMT3A-202ENST00000321117 SOCS3O14543 225 aa9.46□□□□□ -0.9
DNMT3A-202ENST00000321117 RPL35AP18077 110 aaKnown RBP9.46□□□□□ -0.9
DNMT3A-202ENST00000321117 PFN2P35080 140 aa9.46□□□□□ -0.9
DNMT3A-202ENST00000321117 CFAP161Q6P656 301 aa9.46□□□□□ -0.9
DNMT3A-202ENST00000321117 WDFY4Q6ZS81 3184 aa9.45□□□□□ -0.9
DNMT3A-202ENST00000321117 TMEM89A2RUT3 159 aa9.45□□□□□ -0.9
DNMT3A-202ENST00000321117 HERV-K104P63124 156 aa9.45□□□□□ -0.9
DNMT3A-202ENST00000321117 CDKN2A-AS1Q9UH64 79 aa9.45□□□□□ -0.9
DNMT3A-202ENST00000321117 FRYLO94915 3013 aa9.45□□□□□ -0.9
DNMT3A-202ENST00000321117 C19orf84I3L1E1 186 aa9.45□□□□□ -0.9
DNMT3A-202ENST00000321117 PROK1P58294 105 aa9.45□□□□□ -0.9
DNMT3A-202ENST00000321117 RNF152Q8N8N0 203 aa9.45□□□□□ -0.9
DNMT3A-202ENST00000321117 PYGO1Q9Y3Y4 419 aa9.45□□□□□ -0.9
DNMT3A-202ENST00000321117 A0A1W2PPR1 153 aa9.44□□□□□ -0.9
DNMT3A-202ENST00000321117 SPANXDQ9BXN6 97 aa9.44□□□□□ -0.9
DNMT3A-202ENST00000321117 NXPH4O95158 308 aa9.44□□□□□ -0.9
DNMT3A-202ENST00000321117 CMC4P56277 68 aaPredicted RBP9.44□□□□□ -0.9
DNMT3A-202ENST00000321117 C10orf99Q6UWK7 81 aa9.44□□□□□ -0.9
DNMT3A-202ENST00000321117 TMEM61Q8N0U2 210 aa9.44□□□□□ -0.9
DNMT3A-202ENST00000321117 FAM236AA0A1B0GUQ0 79 aa9.43□□□□□ -0.9
DNMT3A-202ENST00000321117 FAM236BA0A1B0GV22 79 aa9.43□□□□□ -0.9
DNMT3A-202ENST00000321117 A8MZ25 164 aa9.43□□□□□ -0.9
DNMT3A-202ENST00000321117 CRIP2P52943 208 aaPredicted RBP9.43□□□□□ -0.9
DNMT3A-202ENST00000321117 LINC00467Q9BRT7 94 aa9.43□□□□□ -0.9
DNMT3A-202ENST00000321117 CDIP1Q9H305 208 aa9.43□□□□□ -0.9
DNMT3A-202ENST00000321117 NAV2Q8IVL1 2488 aa9.43□□□□□ -0.9
DNMT3A-202ENST00000321117 TRAV4A0A0B4J268 109 aa9.43□□□□□ -0.9
DNMT3A-202ENST00000321117 EDN2P20800 178 aa9.43□□□□□ -0.9
DNMT3A-202ENST00000321117 SMCPP49901 116 aaPredicted RBP9.43□□□□□ -0.9
DNMT3A-202ENST00000321117 C3orf56Q8N813 242 aa9.43□□□□□ -0.9
DNMT3A-202ENST00000321117 PRRC2AP48634 2157 aaKnown RBP9.43□□□□□ -0.9
DNMT3A-202ENST00000321117 HIST1H4AP62805 103 aaKnown RBP9.43□□□□□ -0.9
DNMT3A-202ENST00000321117 TLN2Q9Y4G6 2542 aa9.42□□□□□ -0.9
DNMT3A-202ENST00000321117 IGLV1-40P01703 118 aa9.42□□□□□ -0.9
DNMT3A-202ENST00000321117 KIF25-AS1Q9Y6Z4 181 aa9.42□□□□□ -0.9
DNMT3A-202ENST00000321117 COL27A1Q8IZC6 1860 aaPredicted RBP9.42□□□□□ -0.9
DNMT3A-202ENST00000321117 FRYQ5TBA9 3013 aa9.42□□□□□ -0.9
DNMT3A-202ENST00000321117 MALP21145 153 aa9.41□□□□□ -0.9
DNMT3A-202ENST00000321117 CHD8Q9HCK8 2581 aa9.41□□□□□ -0.9
DNMT3A-202ENST00000321117 NOP10Q9NPE3 64 aaKnown RBP9.41□□□□□ -0.9
DNMT3A-202ENST00000321117 PSMB8P28062 276 aa9.4□□□□□ -0.9
DNMT3A-202ENST00000321117 NRGNQ92686 78 aa9.4□□□□□ -0.9
DNMT3A-202ENST00000321117 SPANXCQ9NY87 97 aa9.4□□□□□ -0.9
DNMT3A-202ENST00000321117 CCDC168Q8NDH2 2452 aa9.4□□□□□ -0.9
DNMT3A-202ENST00000321117 DEFB130BP0DP73 79 aa9.4□□□□□ -0.91
DNMT3A-202ENST00000321117 DEFB130AP0DP74 79 aa9.4□□□□□ -0.91
DNMT3A-202ENST00000321117 MRPS36P82909 103 aaKnown RBP9.4□□□□□ -0.91
DNMT3A-202ENST00000321117 SND1-IT1Q9HBX3 110 aa9.4□□□□□ -0.91
DNMT3A-202ENST00000321117 K7EQD1 137 aa9.39□□□□□ -0.91
DNMT3A-202ENST00000321117 PF4P02776 101 aa9.39□□□□□ -0.91
DNMT3A-202ENST00000321117 DAZ2Q13117 558 aaKnown RBP9.39□□□□□ -0.91
DNMT3A-202ENST00000321117 DAZ4Q86SG3 579 aaKnown RBP9.39□□□□□ -0.91
DNMT3A-202ENST00000321117 DAZ3Q9NR90 486 aaKnown RBP9.39□□□□□ -0.91
DNMT3A-202ENST00000321117 COX7A2LO14548 114 aa9.39□□□□□ -0.91
DNMT3A-202ENST00000321117 ZNF580Q9UK33 172 aa9.39□□□□□ -0.91
DNMT3A-202ENST00000321117 RS1O15537 224 aa9.39□□□□□ -0.91
DNMT3A-202ENST00000321117 LINC00315P59091 139 aa9.39□□□□□ -0.91
DNMT3A-202ENST00000321117 MRPL23Q16540 153 aaKnown RBP9.39□□□□□ -0.91
DNMT3A-202ENST00000321117 SPTBN4Q9H254 2564 aa9.39□□□□□ -0.91
DNMT3A-202ENST00000321117 LST1O00453 97 aa9.38□□□□□ -0.91
DNMT3A-202ENST00000321117 SS18Q15532 418 aa9.38□□□□□ -0.91
DNMT3A-202ENST00000321117 S100A7L2Q5SY68 101 aa9.38□□□□□ -0.91
DNMT3A-202ENST00000321117 LINC00308Q8TCZ7 52 aa9.38□□□□□ -0.91
DNMT3A-202ENST00000321117 SETD2Q9BYW2 2564 aaPredicted RBP9.38□□□□□ -0.91
DNMT3A-202ENST00000321117 PIEZO1Q92508 2521 aa9.38□□□□□ -0.91
DNMT3A-202ENST00000321117 NDUFA1O15239 70 aa9.38□□□□□ -0.91
DNMT3A-202ENST00000321117 H7C423 109 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms