RNA–Protein interactions for RNA: ENST00000317840.9

COL3A1-202, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2 BASIC

Gene COL3A1, Length 3,873 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-202ENST00000317840 IGHV4-31P0DP07 118 aa7.81□□□□□ -1.16
COL3A1-202ENST00000317840 SCGB1A1P11684 91 aa7.81□□□□□ -1.16
COL3A1-202ENST00000317840 RHOHQ15669 191 aa7.81□□□□□ -1.16
COL3A1-202ENST00000317840 ANKRD29Q8N6D5 301 aa7.81□□□□□ -1.16
COL3A1-202ENST00000317840 SPATA25Q9BR10 227 aa7.81□□□□□ -1.16
COL3A1-202ENST00000317840 PRO0461Q9UI25 63 aa7.81□□□□□ -1.16
COL3A1-202ENST00000317840 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.8□□□□□ -1.16
COL3A1-202ENST00000317840 RHODO00212 210 aa7.8□□□□□ -1.16
COL3A1-202ENST00000317840 MT-ATP8P03928 68 aa7.8□□□□□ -1.16
COL3A1-202ENST00000317840 NFE4Q86UQ8 179 aa7.8□□□□□ -1.16
COL3A1-202ENST00000317840 LGALS9O00182 355 aa7.8□□□□□ -1.16
COL3A1-202ENST00000317840 LEPROTO15243 131 aa7.8□□□□□ -1.16
COL3A1-202ENST00000317840 HOXD3P31249 432 aaPredicted RBP7.8□□□□□ -1.16
COL3A1-202ENST00000317840 PROK1P58294 105 aa7.8□□□□□ -1.16
COL3A1-202ENST00000317840 KLK9Q2XQG4 91 aa7.8□□□□□ -1.16
COL3A1-202ENST00000317840 UBE2E2Q96LR5 201 aa7.8□□□□□ -1.16
COL3A1-202ENST00000317840 NDUFA12Q9UI09 145 aa7.79□□□□□ -1.16
COL3A1-202ENST00000317840 ZNF580Q9UK33 172 aa7.79□□□□□ -1.16
COL3A1-202ENST00000317840 TEX15Q9BXT5 2789 aa7.79□□□□□ -1.16
COL3A1-202ENST00000317840 IGLV1-40P01703 118 aa7.79□□□□□ -1.16
COL3A1-202ENST00000317840 CRIP2P52943 208 aaPredicted RBP7.79□□□□□ -1.16
COL3A1-202ENST00000317840 C19orf54Q5BKX5 351 aa7.79□□□□□ -1.16
COL3A1-202ENST00000317840 NTN5Q8WTR8 489 aaPredicted RBP7.79□□□□□ -1.16
COL3A1-202ENST00000317840 ZNF625Q96I27 306 aaPredicted RBP7.79□□□□□ -1.16
COL3A1-202ENST00000317840 J3QLI3 93 aa7.79□□□□□ -1.16
COL3A1-202ENST00000317840 SNCGO76070 127 aa7.79□□□□□ -1.16
COL3A1-202ENST00000317840 ZNF22P17026 224 aaPredicted RBP7.79□□□□□ -1.16
COL3A1-202ENST00000317840 SMCPP49901 116 aaPredicted RBP7.79□□□□□ -1.16
COL3A1-202ENST00000317840 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.78□□□□□ -1.16
COL3A1-202ENST00000317840 IGKV2-29A2NJV5 120 aaPredicted RBP7.78□□□□□ -1.16
COL3A1-202ENST00000317840 PF4P02776 101 aa7.78□□□□□ -1.16
COL3A1-202ENST00000317840 TEX29Q8N6K0 151 aa7.78□□□□□ -1.16
COL3A1-202ENST00000317840 TMEM262E9PQX1 116 aa7.78□□□□□ -1.16
COL3A1-202ENST00000317840 M0R2P5 195 aa7.78□□□□□ -1.16
COL3A1-202ENST00000317840 FAM19A4Q96LR4 140 aa7.78□□□□□ -1.16
COL3A1-202ENST00000317840 IGHV3-30-3P0DP02 117 aa7.78□□□□□ -1.16
COL3A1-202ENST00000317840 ATXN8Q156A1 80 aa7.78□□□□□ -1.16
COL3A1-202ENST00000317840 IGLV4-3A0A075B6K6 122 aa7.78□□□□□ -1.16
COL3A1-202ENST00000317840 K7EQG2 157 aa7.78□□□□□ -1.16
COL3A1-202ENST00000317840 NXPH4O95158 308 aa7.78□□□□□ -1.16
COL3A1-202ENST00000317840 UBE2D3P61077 147 aa7.78□□□□□ -1.16
COL3A1-202ENST00000317840 UBE2D2P62837 147 aa7.78□□□□□ -1.16
COL3A1-202ENST00000317840 RPL32P62910 135 aaKnown RBP7.78□□□□□ -1.16
COL3A1-202ENST00000317840 C18orf65Q6ZTR6 163 aa7.78□□□□□ -1.16
COL3A1-202ENST00000317840 ATP6V0E2Q8NHE4 81 aa7.78□□□□□ -1.16
COL3A1-202ENST00000317840 ANAPC13Q9BS18 74 aa7.78□□□□□ -1.16
COL3A1-202ENST00000317840 TRBV6-5A0A0K0K1A5 114 aa7.77□□□□□ -1.17
COL3A1-202ENST00000317840 TMEM223A0PJW6 202 aa7.77□□□□□ -1.17
COL3A1-202ENST00000317840 Q6ZUT4 128 aa7.77□□□□□ -1.17
COL3A1-202ENST00000317840 SMR3AQ99954 134 aa7.77□□□□□ -1.17
COL3A1-202ENST00000317840 APRG1Q8IVJ8 170 aa7.77□□□□□ -1.17
COL3A1-202ENST00000317840 DAND5Q8N907 189 aa7.77□□□□□ -1.17
COL3A1-202ENST00000317840 C9orf85Q96MD7 179 aa7.77□□□□□ -1.17
COL3A1-202ENST00000317840 A8MZ25 164 aa7.77□□□□□ -1.17
COL3A1-202ENST00000317840 PSMB8P28062 276 aa7.77□□□□□ -1.17
COL3A1-202ENST00000317840 ZFAND6Q6FIF0 208 aa7.77□□□□□ -1.17
COL3A1-202ENST00000317840 C2orf82Q6UX34 121 aa7.77□□□□□ -1.17
COL3A1-202ENST00000317840 CRYBA4P53673 196 aa7.76□□□□□ -1.17
COL3A1-202ENST00000317840 XGP55808 180 aa7.76□□□□□ -1.17
COL3A1-202ENST00000317840 A0A0J9YXY3 114 aa7.76□□□□□ -1.17
COL3A1-202ENST00000317840 IGHV3-33P01772 117 aa7.76□□□□□ -1.17
COL3A1-202ENST00000317840 CIRBPQ14011 172 aaKnown RBP7.76□□□□□ -1.17
COL3A1-202ENST00000317840 PEMTQ9UBM1 199 aa7.76□□□□□ -1.17
COL3A1-202ENST00000317840 TEP1Q99973 2627 aaKnown RBP7.76□□□□□ -1.17
COL3A1-202ENST00000317840 TTC32Q5I0X7 151 aa7.76□□□□□ -1.17
COL3A1-202ENST00000317840 MEIG1Q5JSS6 88 aa7.76□□□□□ -1.17
COL3A1-202ENST00000317840 XCL2Q9UBD3 114 aa7.76□□□□□ -1.17
COL3A1-202ENST00000317840 F8P00451 2351 aa7.75□□□□□ -1.17
COL3A1-202ENST00000317840 TRAV26-1A0A087WT03 109 aa7.75□□□□□ -1.17
COL3A1-202ENST00000317840 IGHV3-53P01767 116 aa7.75□□□□□ -1.17
COL3A1-202ENST00000317840 RPL35AP18077 110 aaKnown RBP7.75□□□□□ -1.17
COL3A1-202ENST00000317840 ZNF415Q09FC8 603 aa7.75□□□□□ -1.17
COL3A1-202ENST00000317840 GAGE2BQ13066 116 aa7.75□□□□□ -1.17
COL3A1-202ENST00000317840 GAGE2EQ4V326 116 aa7.75□□□□□ -1.17
COL3A1-202ENST00000317840 GAGE2DQ9UEU5 116 aa7.75□□□□□ -1.17
COL3A1-202ENST00000317840 IGKV3OR2-268A0A0C4DH90 116 aa7.75□□□□□ -1.17
COL3A1-202ENST00000317840 LINC01620Q4KN68 170 aa7.74□□□□□ -1.17
COL3A1-202ENST00000317840 TRAV13-1A0A0B4J241 112 aa7.74□□□□□ -1.17
COL3A1-202ENST00000317840 TRAV8-4A0A0B4J246 113 aa7.74□□□□□ -1.17
COL3A1-202ENST00000317840 CARD19Q96LW7 228 aa7.74□□□□□ -1.17
COL3A1-202ENST00000317840 STHQ8IWL8 128 aa7.74□□□□□ -1.17
COL3A1-202ENST00000317840 ELANEP08246 267 aa7.73□□□□□ -1.17
COL3A1-202ENST00000317840 CDIP1Q9H305 208 aa7.73□□□□□ -1.17
COL3A1-202ENST00000317840 CELSR2Q9HCU4 2923 aa7.73□□□□□ -1.17
COL3A1-202ENST00000317840 TRGV1A0A0A0MS02 117 aa7.73□□□□□ -1.17
COL3A1-202ENST00000317840 RPL13AP40429 203 aaKnown RBP7.73□□□□□ -1.17
COL3A1-202ENST00000317840 TEX49A0A1B0GTD5 131 aa7.73□□□□□ -1.17
COL3A1-202ENST00000317840 TMEM61Q8N0U2 210 aa7.73□□□□□ -1.17
COL3A1-202ENST00000317840 ODF3Q96PU9 254 aa7.73□□□□□ -1.17
COL3A1-202ENST00000317840 ITPR2Q14571 2701 aa7.72□□□□□ -1.17
COL3A1-202ENST00000317840 IGHV1-58A0A0C4DH39 117 aa7.72□□□□□ -1.17
COL3A1-202ENST00000317840 ATRQ13535 2644 aa7.72□□□□□ -1.17
COL3A1-202ENST00000317840 A0A0B4J2C4 111 aa7.72□□□□□ -1.17
COL3A1-202ENST00000317840 H3BMM0 161 aa7.72□□□□□ -1.17
COL3A1-202ENST00000317840 Q6YL49 198 aa7.72□□□□□ -1.17
COL3A1-202ENST00000317840 POM121L12Q8N7R1 296 aa7.72□□□□□ -1.17
COL3A1-202ENST00000317840 TMEM263Q8WUH6 116 aaKnown RBP7.72□□□□□ -1.17
COL3A1-202ENST00000317840 CLEC2BQ92478 149 aa7.72□□□□□ -1.17
COL3A1-202ENST00000317840 UBE2WQ96B02 151 aa7.72□□□□□ -1.17
COL3A1-202ENST00000317840 Q9UF83 564 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms