RNA–Protein interactions for RNA: ENST00000316448.9

CALR-201, Transcript of calreticulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALR, Length 1,903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-201ENST00000316448 GAGE7O76087 117 aa11.21□□□□□ -0.61
CALR-201ENST00000316448 GAGE12FP0CL80 117 aa11.21□□□□□ -0.61
CALR-201ENST00000316448 GAGE12GP0CL81 117 aa11.21□□□□□ -0.61
CALR-201ENST00000316448 GAGE12IP0CL82 117 aa11.21□□□□□ -0.61
CALR-201ENST00000316448 NBEAL2Q6ZNJ1 2754 aa11.21□□□□□ -0.61
CALR-201ENST00000316448 TMEM141Q96I45 108 aa11.21□□□□□ -0.62
CALR-201ENST00000316448 C2orf91Q6ZV80 131 aa11.2□□□□□ -0.62
CALR-201ENST00000316448 BOD1L2Q8IYS8 172 aa11.2□□□□□ -0.62
CALR-201ENST00000316448 OR4C5Q8NGB2 326 aa11.2□□□□□ -0.62
CALR-201ENST00000316448 DLEU1O43261 78 aa11.19□□□□□ -0.62
CALR-201ENST00000316448 ZC2HC1BQ5TFG8 222 aa11.19□□□□□ -0.62
CALR-201ENST00000316448 C20orf203Q8NBC4 194 aa11.19□□□□□ -0.62
CALR-201ENST00000316448 CHTOPQ9Y3Y2 248 aaKnown RBP11.19□□□□□ -0.62
CALR-201ENST00000316448 PRSS29PA6NIE9 313 aa11.19□□□□□ -0.62
CALR-201ENST00000316448 OR11H2Q8NH07 326 aa11.19□□□□□ -0.62
CALR-201ENST00000316448 DNAJC30Q96LL9 226 aa11.19□□□□□ -0.62
CALR-201ENST00000316448 TNFRSF18Q9Y5U5 241 aa11.19□□□□□ -0.62
CALR-201ENST00000316448 IGKV2D-26A0A0A0MRZ7 120 aa11.18□□□□□ -0.62
CALR-201ENST00000316448 TRAV4A0A0B4J268 109 aa11.18□□□□□ -0.62
CALR-201ENST00000316448 A0A1B0GV90 55 aa11.18□□□□□ -0.62
CALR-201ENST00000316448 DEFB4AO15263 64 aa11.18□□□□□ -0.62
CALR-201ENST00000316448 SMIM9A6NGZ8 99 aa11.17□□□□□ -0.62
CALR-201ENST00000316448 NMUP48645 174 aa11.17□□□□□ -0.62
CALR-201ENST00000316448 TCTAP57738 103 aa11.17□□□□□ -0.62
CALR-201ENST00000316448 BATFQ16520 125 aa11.17□□□□□ -0.62
CALR-201ENST00000316448 RNF183Q96D59 192 aa11.17□□□□□ -0.62
CALR-201ENST00000316448 A8MZ25 164 aa11.17□□□□□ -0.62
CALR-201ENST00000316448 PRB2P02812 416 aaPredicted RBP11.17□□□□□ -0.62
CALR-201ENST00000316448 IGHV4-28A0A0C4DH34 117 aa11.16□□□□□ -0.62
CALR-201ENST00000316448 PMVKQ15126 192 aa11.16□□□□□ -0.62
CALR-201ENST00000316448 PCP2Q8IVA1 136 aa11.16□□□□□ -0.62
CALR-201ENST00000316448 LINC00612Q8N6U2 182 aa11.16□□□□□ -0.62
CALR-201ENST00000316448 TRGV2A0A075B6R0 118 aa11.15□□□□□ -0.62
CALR-201ENST00000316448 HINT1P49773 126 aaPredicted RBP11.15□□□□□ -0.62
CALR-201ENST00000316448 Q8NAQ8 132 aa11.15□□□□□ -0.62
CALR-201ENST00000316448 IGLV4-69A0A075B6H9 119 aa11.15□□□□□ -0.62
CALR-201ENST00000316448 COL5A1-AS1Q5SY13 56 aa11.15□□□□□ -0.62
CALR-201ENST00000316448 CST9LQ9H4G1 147 aa11.15□□□□□ -0.62
CALR-201ENST00000316448 RETNQ9HD89 108 aa11.15□□□□□ -0.62
CALR-201ENST00000316448 DEFB130BP0DP73 79 aa11.14□□□□□ -0.63
CALR-201ENST00000316448 DEFB130AP0DP74 79 aa11.14□□□□□ -0.63
CALR-201ENST00000316448 MPV17L2Q567V2 206 aa11.14□□□□□ -0.63
CALR-201ENST00000316448 LURAP1LQ8IV03 231 aa11.14□□□□□ -0.63
CALR-201ENST00000316448 TRBV10-1A0A0K0K1A3 114 aa11.13□□□□□ -0.63
CALR-201ENST00000316448 K7EQD1 137 aa11.13□□□□□ -0.63
CALR-201ENST00000316448 SIVA1O15304 175 aa11.13□□□□□ -0.63
CALR-201ENST00000316448 FHL2Q14192 279 aa11.13□□□□□ -0.63
CALR-201ENST00000316448 FAM222AQ5U5X8 452 aa11.13□□□□□ -0.63
CALR-201ENST00000316448 SLC25A29Q8N8R3 303 aa11.13□□□□□ -0.63
CALR-201ENST00000316448 PYGO1Q9Y3Y4 419 aa11.13□□□□□ -0.63
CALR-201ENST00000316448 CHCHD7Q9BUK0 85 aa11.13□□□□□ -0.63
CALR-201ENST00000316448 IGLV4-3A0A075B6K6 122 aa11.12□□□□□ -0.63
CALR-201ENST00000316448 ZMAT5Q9UDW3 170 aaKnown RBP11.12□□□□□ -0.63
CALR-201ENST00000316448 TRBV7-3A0A075B6L6 115 aa11.11□□□□□ -0.63
CALR-201ENST00000316448 LOC100131303A0A0U1RQF7 123 aa11.11□□□□□ -0.63
CALR-201ENST00000316448 C11orf86A6NJI1 115 aa11.11□□□□□ -0.63
CALR-201ENST00000316448 CIDEAO60543 219 aa11.11□□□□□ -0.63
CALR-201ENST00000316448 NPSP0C0P6 89 aa11.11□□□□□ -0.63
CALR-201ENST00000316448 PAPPA-AS1Q5QFB9 102 aa11.11□□□□□ -0.63
CALR-201ENST00000316448 BVES-AS1Q5T3Y7 98 aa11.11□□□□□ -0.63
CALR-201ENST00000316448 CELA1Q9UNI1 258 aa11.11□□□□□ -0.63
CALR-201ENST00000316448 NOTCH1P46531 2555 aa11.11□□□□□ -0.63
CALR-201ENST00000316448 IGHV3-38A0A0C4DH36 116 aa11.11□□□□□ -0.63
CALR-201ENST00000316448 PHLDA1Q8WV24 401 aaPredicted RBP11.11□□□□□ -0.63
CALR-201ENST00000316448 FAM104AQ969W3 186 aa11.11□□□□□ -0.63
CALR-201ENST00000316448 TTTY13Q9BZ97 58 aa11.11□□□□□ -0.63
CALR-201ENST00000316448 MIFP14174 115 aa11.1□□□□□ -0.63
CALR-201ENST00000316448 COTL1Q14019 142 aa11.1□□□□□ -0.63
CALR-201ENST00000316448 ZNRF2Q8NHG8 242 aa11.1□□□□□ -0.63
CALR-201ENST00000316448 OPRPNQ99935 248 aaPredicted RBP11.1□□□□□ -0.63
CALR-201ENST00000316448 E9PLD3 99 aa11.09□□□□□ -0.63
CALR-201ENST00000316448 K7EIL1 84 aa11.09□□□□□ -0.63
CALR-201ENST00000316448 CRYBA4P53673 196 aa11.09□□□□□ -0.63
CALR-201ENST00000316448 RPL36AP83881 106 aaKnown RBP11.09□□□□□ -0.63
CALR-201ENST00000316448 TMEM97Q5BJF2 176 aa11.09□□□□□ -0.63
CALR-201ENST00000316448 NFE4Q86UQ8 179 aa11.09□□□□□ -0.63
CALR-201ENST00000316448 RPL36ALQ969Q0 106 aaKnown RBP11.09□□□□□ -0.63
CALR-201ENST00000316448 SPANXA1Q9NS26 97 aa11.09□□□□□ -0.63
CALR-201ENST00000316448 HIGD1BQ9P298 99 aa11.09□□□□□ -0.63
CALR-201ENST00000316448 TRGV4A0A0C4DH28 118 aa11.08□□□□□ -0.64
CALR-201ENST00000316448 GAGE12JA6NER3 117 aa11.08□□□□□ -0.64
CALR-201ENST00000316448 LYRM9A8MSI8 78 aa11.08□□□□□ -0.64
CALR-201ENST00000316448 UBE2D3P61077 147 aa11.08□□□□□ -0.64
CALR-201ENST00000316448 UBE2D2P62837 147 aa11.08□□□□□ -0.64
CALR-201ENST00000316448 GAGE1Q13065 139 aa11.08□□□□□ -0.64
CALR-201ENST00000316448 GAGE4Q13068 117 aa11.08□□□□□ -0.64
CALR-201ENST00000316448 GAGE5Q13069 117 aa11.08□□□□□ -0.64
CALR-201ENST00000316448 GAGE13Q4V321 117 aa11.08□□□□□ -0.64
CALR-201ENST00000316448 AMELXQ99217 191 aa11.08□□□□□ -0.64
CALR-201ENST00000316448 UBE2D4Q9Y2X8 147 aa11.08□□□□□ -0.64
CALR-201ENST00000316448 TRBV6-4A0A1B0GX49 114 aa11.07□□□□□ -0.64
CALR-201ENST00000316448 KPRPQ5T749 579 aaPredicted RBP11.07□□□□□ -0.64
CALR-201ENST00000316448 TRBV25-1A0A075B6N4 114 aa11.07□□□□□ -0.64
CALR-201ENST00000316448 HSD52Q0P140 79 aa11.07□□□□□ -0.64
CALR-201ENST00000316448 DAZ4Q86SG3 579 aaKnown RBP11.07□□□□□ -0.64
CALR-201ENST00000316448 DAZ3Q9NR90 486 aaKnown RBP11.07□□□□□ -0.64
CALR-201ENST00000316448 TRAV8-6A0A0B4J262 113 aa11.06□□□□□ -0.64
CALR-201ENST00000316448 SBSPONQ8IVN8 264 aa11.06□□□□□ -0.64
CALR-201ENST00000316448 MAPKAPK5-AS1Q8N8E1 139 aa11.06□□□□□ -0.64
CALR-201ENST00000316448 PRADC1Q9BSG0 188 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 498.6 ms