RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 TRAV8-3A0A0A6YYJ7 113 aa18.49■□□□□ 0.55
HOXB3-201ENST00000311626 LEPROTO15243 131 aa18.49■□□□□ 0.55
HOXB3-201ENST00000311626 AZU1P20160 251 aa18.49■□□□□ 0.55
HOXB3-201ENST00000311626 SMAGPQ0VAQ4 97 aa18.49■□□□□ 0.55
HOXB3-201ENST00000311626 SETD2Q9BYW2 2564 aaPredicted RBP18.48■□□□□ 0.55
HOXB3-201ENST00000311626 A4D1N5 150 aa18.48■□□□□ 0.55
HOXB3-201ENST00000311626 GAGE12HA6NDE8 117 aa18.48■□□□□ 0.55
HOXB3-201ENST00000311626 TNFRSF18Q9Y5U5 241 aa18.48■□□□□ 0.55
HOXB3-201ENST00000311626 A8MZ25 164 aa18.48■□□□□ 0.55
HOXB3-201ENST00000311626 TCL1BO95988 128 aa18.48■□□□□ 0.55
HOXB3-201ENST00000311626 CFAP126Q5VTH2 177 aa18.48■□□□□ 0.55
HOXB3-201ENST00000311626 IGKV2D-29A0A075B6S2 120 aaPredicted RBP18.47■□□□□ 0.55
HOXB3-201ENST00000311626 IGKV2-29A2NJV5 120 aaPredicted RBP18.47■□□□□ 0.55
HOXB3-201ENST00000311626 TMEM238C9JI98 176 aa18.47■□□□□ 0.55
HOXB3-201ENST00000311626 AKAP9Q99996 3911 aa18.47■□□□□ 0.55
HOXB3-201ENST00000311626 C10orf126Q8N4M7 172 aa18.47■□□□□ 0.55
HOXB3-201ENST00000311626 LINC01587Q99440 93 aa18.47■□□□□ 0.55
HOXB3-201ENST00000311626 UBE2D3P61077 147 aa18.46■□□□□ 0.55
HOXB3-201ENST00000311626 UBE2D2P62837 147 aa18.46■□□□□ 0.55
HOXB3-201ENST00000311626 MUSTN1Q8IVN3 82 aa18.46■□□□□ 0.55
HOXB3-201ENST00000311626 Q5PR19 223 aa18.46■□□□□ 0.55
HOXB3-201ENST00000311626 SCGB1C2P0DMR2 95 aa18.45■□□□□ 0.54
HOXB3-201ENST00000311626 RNF152Q8N8N0 203 aa18.44■□□□□ 0.54
HOXB3-201ENST00000311626 MAP6D1Q9H9H5 199 aa18.44■□□□□ 0.54
HOXB3-201ENST00000311626 IGHV3OR16-12A0A075B7B8 117 aa18.44■□□□□ 0.54
HOXB3-201ENST00000311626 DYNLRB2Q8TF09 96 aa18.44■□□□□ 0.54
HOXB3-201ENST00000311626 NBPF19A0A087WUL8 3843 aa18.43■□□□□ 0.54
HOXB3-201ENST00000311626 M0R2P5 195 aa18.43■□□□□ 0.54
HOXB3-201ENST00000311626 Q96MF0 132 aa18.43■□□□□ 0.54
HOXB3-201ENST00000311626 PRO1854Q9UHT4 67 aa18.43■□□□□ 0.54
HOXB3-201ENST00000311626 NIPBLQ6KC79 2804 aaeCLIP18.43■□□□□ 0.54
HOXB3-201ENST00000311626 SIGMAR1Q99720 223 aa18.43■□□□□ 0.54
HOXB3-201ENST00000311626 A0A1W2PRX2 142 aa18.42■□□□□ 0.54
HOXB3-201ENST00000311626 J3QR89 54 aa18.42■□□□□ 0.54
HOXB3-201ENST00000311626 IGHV3-30-3P0DP02 117 aa18.42■□□□□ 0.54
HOXB3-201ENST00000311626 XCL2Q9UBD3 114 aa18.42■□□□□ 0.54
HOXB3-201ENST00000311626 CCDC168Q8NDH2 2452 aa18.41■□□□□ 0.54
HOXB3-201ENST00000311626 NPC2P61916 151 aa18.4■□□□□ 0.54
HOXB3-201ENST00000311626 UBR5O95071 2799 aaPredicted RBP18.4■□□□□ 0.54
HOXB3-201ENST00000311626 A0A0J9YXY3 114 aa18.39■□□□□ 0.54
HOXB3-201ENST00000311626 ZNF415Q09FC8 603 aa18.39■□□□□ 0.54
HOXB3-201ENST00000311626 CHCHD7Q9BUK0 85 aa18.39■□□□□ 0.54
HOXB3-201ENST00000311626 FOXI1Q12951 378 aa18.39■□□□□ 0.53
HOXB3-201ENST00000311626 LINC00467Q9BRT7 94 aa18.39■□□□□ 0.53
HOXB3-201ENST00000311626 TIMM21Q9BVV7 248 aa18.39■□□□□ 0.53
HOXB3-201ENST00000311626 SPINK8P0C7L1 97 aa18.38■□□□□ 0.53
HOXB3-201ENST00000311626 C1QTNF4Q9BXJ3 329 aa18.38■□□□□ 0.53
HOXB3-201ENST00000311626 APCP25054 2843 aa18.38■□□□□ 0.53
HOXB3-201ENST00000311626 A8MWV9 139 aa18.38■□□□□ 0.53
HOXB3-201ENST00000311626 PEMTQ9UBM1 199 aa18.38■□□□□ 0.53
HOXB3-201ENST00000311626 DEFB114Q30KQ6 69 aa18.37■□□□□ 0.53
HOXB3-201ENST00000311626 Q6ZUT4 128 aa18.37■□□□□ 0.53
HOXB3-201ENST00000311626 C11orf72Q8NBR9 251 aa18.37■□□□□ 0.53
HOXB3-201ENST00000311626 PRSS2P07478 247 aa18.37■□□□□ 0.53
HOXB3-201ENST00000311626 DEFB113Q30KQ7 82 aa18.36■□□□□ 0.53
HOXB3-201ENST00000311626 TMEM263Q8WUH6 116 aaKnown RBP18.36■□□□□ 0.53
HOXB3-201ENST00000311626 C2CD3Q4AC94 2353 aa18.36■□□□□ 0.53
HOXB3-201ENST00000311626 C4orf3Q8WVX3 66 aa18.36■□□□□ 0.53
HOXB3-201ENST00000311626 IGHV3-33P01772 117 aa18.35■□□□□ 0.53
HOXB3-201ENST00000311626 ADAMTSL4-AS1Q5T5F5 129 aa18.35■□□□□ 0.53
HOXB3-201ENST00000311626 CARD19Q96LW7 228 aa18.35■□□□□ 0.53
HOXB3-201ENST00000311626 UBE2D4Q9Y2X8 147 aa18.35■□□□□ 0.53
HOXB3-201ENST00000311626 PYGO1Q9Y3Y4 419 aa18.35■□□□□ 0.53
HOXB3-201ENST00000311626 ITPR3Q14573 2671 aa18.35■□□□□ 0.53
HOXB3-201ENST00000311626 A8MTW9 85 aa18.35■□□□□ 0.53
HOXB3-201ENST00000311626 MRPS36P82909 103 aaKnown RBP18.35■□□□□ 0.53
HOXB3-201ENST00000311626 JMJD1CQ15652 2540 aa18.34■□□□□ 0.53
HOXB3-201ENST00000311626 Q1RN00 199 aa18.34■□□□□ 0.53
HOXB3-201ENST00000311626 SPATA25Q9BR10 227 aa18.34■□□□□ 0.53
HOXB3-201ENST00000311626 Q6ZSV7 163 aa18.33■□□□□ 0.53
HOXB3-201ENST00000311626 FHL3Q13643 280 aa18.33■□□□□ 0.52
HOXB3-201ENST00000311626 Q8N2B8 174 aa18.33■□□□□ 0.52
HOXB3-201ENST00000311626 IGHV3-53P01767 116 aa18.32■□□□□ 0.52
HOXB3-201ENST00000311626 ERG28Q9UKR5 140 aa18.32■□□□□ 0.52
HOXB3-201ENST00000311626 NDUFA12Q9UI09 145 aa18.31■□□□□ 0.52
HOXB3-201ENST00000311626 LITAFQ99732 161 aa18.31■□□□□ 0.52
HOXB3-201ENST00000311626 EDA2RQ9HAV5 297 aa18.31■□□□□ 0.52
HOXB3-201ENST00000311626 INSP01308 110 aa18.3■□□□□ 0.52
HOXB3-201ENST00000311626 ODF3L2Q3SX64 289 aa18.3■□□□□ 0.52
HOXB3-201ENST00000311626 LYRM7Q5U5X0 104 aa18.3■□□□□ 0.52
HOXB3-201ENST00000311626 ZNF843Q8N446 348 aa18.3■□□□□ 0.52
HOXB3-201ENST00000311626 DAND5Q8N907 189 aa18.3■□□□□ 0.52
HOXB3-201ENST00000311626 IGHV1-58A0A0C4DH39 117 aa18.29■□□□□ 0.52
HOXB3-201ENST00000311626 C9JAW5 83 aa18.28■□□□□ 0.52
HOXB3-201ENST00000311626 ANKRD29Q8N6D5 301 aa18.28■□□□□ 0.52
HOXB3-201ENST00000311626 HIST2H2BCQ6DN03 193 aa18.28■□□□□ 0.52
HOXB3-201ENST00000311626 TRBV20-1A0A075B6N2 111 aa18.27■□□□□ 0.52
HOXB3-201ENST00000311626 TRGV1A0A0A0MS02 117 aa18.27■□□□□ 0.52
HOXB3-201ENST00000311626 NDUFA7O95182 113 aa18.27■□□□□ 0.52
HOXB3-201ENST00000311626 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP18.27■□□□□ 0.52
HOXB3-201ENST00000311626 VSIG2Q96IQ7 327 aa18.27■□□□□ 0.51
HOXB3-201ENST00000311626 CDKN2A-AS1Q9UH64 79 aa18.27■□□□□ 0.51
HOXB3-201ENST00000311626 CDIP1Q9H305 208 aa18.26■□□□□ 0.51
HOXB3-201ENST00000311626 FLNAP21333 2647 aaKnown RBP18.26■□□□□ 0.51
HOXB3-201ENST00000311626 TEN1Q86WV5 123 aa18.26■□□□□ 0.51
HOXB3-201ENST00000311626 KRTAP1-3Q8IUG1 177 aa18.26■□□□□ 0.51
HOXB3-201ENST00000311626 C1orf158Q8N1D5 194 aa18.26■□□□□ 0.51
HOXB3-201ENST00000311626 GEMIN7Q9H840 131 aaKnown RBP18.26■□□□□ 0.51
HOXB3-201ENST00000311626 TINCRA0A1B0GVN0 87 aa18.25■□□□□ 0.51
HOXB3-201ENST00000311626 COX6A2Q02221 97 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms