RNA–Protein interactions for RNA: ENST00000311034.6

NPAS4-201, Transcript of neuronal PAS domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPAS4, Length 3,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4-201ENST00000311034 Q8N1Y9 231 aa10.1□□□□□ -0.79
NPAS4-201ENST00000311034 LINC01587Q99440 93 aa10.1□□□□□ -0.79
NPAS4-201ENST00000311034 Q9UF83 564 aa10.1□□□□□ -0.79
NPAS4-201ENST00000311034 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.1□□□□□ -0.79
NPAS4-201ENST00000311034 TEX49A0A1B0GTD5 131 aa10.1□□□□□ -0.79
NPAS4-201ENST00000311034 IGKV2-29A2NJV5 120 aaPredicted RBP10.1□□□□□ -0.79
NPAS4-201ENST00000311034 LINC00315P59091 139 aa10.1□□□□□ -0.79
NPAS4-201ENST00000311034 GAGE2BQ13066 116 aa10.1□□□□□ -0.79
NPAS4-201ENST00000311034 DEFB112Q30KQ8 113 aa10.1□□□□□ -0.79
NPAS4-201ENST00000311034 GAGE2EQ4V326 116 aa10.1□□□□□ -0.79
NPAS4-201ENST00000311034 GAGE2DQ9UEU5 116 aa10.1□□□□□ -0.79
NPAS4-201ENST00000311034 F8P00451 2351 aa10.09□□□□□ -0.79
NPAS4-201ENST00000311034 CD28P10747 220 aa10.09□□□□□ -0.79
NPAS4-201ENST00000311034 Q6ZSV7 163 aa10.09□□□□□ -0.79
NPAS4-201ENST00000311034 C18orf65Q6ZTR6 163 aa10.09□□□□□ -0.79
NPAS4-201ENST00000311034 TOMM7Q9P0U1 55 aa10.09□□□□□ -0.79
NPAS4-201ENST00000311034 SOCS3O14543 225 aa10.09□□□□□ -0.79
NPAS4-201ENST00000311034 TTC32Q5I0X7 151 aa10.09□□□□□ -0.79
NPAS4-201ENST00000311034 C11orf68Q9H3H3 251 aaKnown RBP10.09□□□□□ -0.79
NPAS4-201ENST00000311034 IGHV3-33P01772 117 aa10.08□□□□□ -0.8
NPAS4-201ENST00000311034 C3orf56Q8N813 242 aa10.08□□□□□ -0.8
NPAS4-201ENST00000311034 DYNLRB2Q8TF09 96 aa10.08□□□□□ -0.8
NPAS4-201ENST00000311034 KIF25-AS1Q9Y6Z4 181 aa10.08□□□□□ -0.8
NPAS4-201ENST00000311034 TRAV13-1A0A0B4J241 112 aa10.08□□□□□ -0.8
NPAS4-201ENST00000311034 FBXL19-AS1Q494R0 122 aa10.08□□□□□ -0.8
NPAS4-201ENST00000311034 TIMM17AQ99595 171 aa10.08□□□□□ -0.8
NPAS4-201ENST00000311034 TNFRSF18Q9Y5U5 241 aa10.08□□□□□ -0.8
NPAS4-201ENST00000311034 TRAV4A0A0B4J268 109 aa10.07□□□□□ -0.8
NPAS4-201ENST00000311034 TMEM262E9PQX1 116 aa10.07□□□□□ -0.8
NPAS4-201ENST00000311034 SLURP1P55000 103 aa10.07□□□□□ -0.8
NPAS4-201ENST00000311034 HIST2H2BCQ6DN03 193 aa10.07□□□□□ -0.8
NPAS4-201ENST00000311034 ATRQ13535 2644 aa10.07□□□□□ -0.8
NPAS4-201ENST00000311034 CRLF1O75462 422 aa10.07□□□□□ -0.8
NPAS4-201ENST00000311034 TRAV8-4A0A0B4J246 113 aa10.07□□□□□ -0.8
NPAS4-201ENST00000311034 ZNF22P17026 224 aaPredicted RBP10.07□□□□□ -0.8
NPAS4-201ENST00000311034 RS1O15537 224 aa10.06□□□□□ -0.8
NPAS4-201ENST00000311034 ATXN8Q156A1 80 aa10.06□□□□□ -0.8
NPAS4-201ENST00000311034 TIMM21Q9BVV7 248 aa10.06□□□□□ -0.8
NPAS4-201ENST00000311034 RHODO00212 210 aa10.06□□□□□ -0.8
NPAS4-201ENST00000311034 LEPROTO15243 131 aa10.06□□□□□ -0.8
NPAS4-201ENST00000311034 NBL1P41271 181 aa10.06□□□□□ -0.8
NPAS4-201ENST00000311034 LINC01620Q4KN68 170 aa10.06□□□□□ -0.8
NPAS4-201ENST00000311034 C2orf82Q6UX34 121 aa10.06□□□□□ -0.8
NPAS4-201ENST00000311034 EIF4EBP3O60516 100 aaPredicted RBP10.05□□□□□ -0.8
NPAS4-201ENST00000311034 CLEC2BQ92478 149 aa10.05□□□□□ -0.8
NPAS4-201ENST00000311034 IGHV4OR15-8A0A075B7B6 117 aa10.05□□□□□ -0.8
NPAS4-201ENST00000311034 A0A087WW49 117 aa10.05□□□□□ -0.8
NPAS4-201ENST00000311034 TMEM223A0PJW6 202 aa10.05□□□□□ -0.8
NPAS4-201ENST00000311034 TMEM263Q8WUH6 116 aaKnown RBP10.05□□□□□ -0.8
NPAS4-201ENST00000311034 MSMBP08118 114 aa10.05□□□□□ -0.8
NPAS4-201ENST00000311034 MED14OSP0DP75 135 aa10.05□□□□□ -0.8
NPAS4-201ENST00000311034 HELZ2Q9BYK8 2649 aaKnown RBP10.05□□□□□ -0.8
NPAS4-201ENST00000311034 TEP1Q99973 2627 aaKnown RBP10.04□□□□□ -0.8
NPAS4-201ENST00000311034 TRIAP1O43715 76 aa10.04□□□□□ -0.8
NPAS4-201ENST00000311034 M0QY20 66 aa10.04□□□□□ -0.8
NPAS4-201ENST00000311034 AMELXQ99217 191 aa10.04□□□□□ -0.8
NPAS4-201ENST00000311034 A0A0J9YXY3 114 aa10.04□□□□□ -0.8
NPAS4-201ENST00000311034 TRBV27A0A0K0K1C4 114 aa10.04□□□□□ -0.8
NPAS4-201ENST00000311034 IGHV3-30-3P0DP02 117 aa10.04□□□□□ -0.8
NPAS4-201ENST00000311034 C15orf53Q8NAA6 179 aa10.04□□□□□ -0.8
NPAS4-201ENST00000311034 KLLNB2CW77 178 aa10.03□□□□□ -0.8
NPAS4-201ENST00000311034 UCNP55089 124 aa10.03□□□□□ -0.8
NPAS4-201ENST00000311034 USMG5Q96IX5 58 aa10.03□□□□□ -0.8
NPAS4-201ENST00000311034 ITPR2Q14571 2701 aa10.03□□□□□ -0.8
NPAS4-201ENST00000311034 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.03□□□□□ -0.8
NPAS4-201ENST00000311034 I3L3M4 83 aa10.03□□□□□ -0.8
NPAS4-201ENST00000311034 C20orf203Q8NBC4 194 aa10.03□□□□□ -0.8
NPAS4-201ENST00000311034 IGLV4-3A0A075B6K6 122 aa10.02□□□□□ -0.8
NPAS4-201ENST00000311034 IGHV1OR15-1A0A075B7D0 117 aa10.02□□□□□ -0.8
NPAS4-201ENST00000311034 H3BMM0 161 aa10.02□□□□□ -0.8
NPAS4-201ENST00000311034 RNASE1P07998 156 aaKnown RBP10.02□□□□□ -0.8
NPAS4-201ENST00000311034 UBE2WQ96B02 151 aa10.02□□□□□ -0.8
NPAS4-201ENST00000311034 NDUFA12Q9UI09 145 aa10.02□□□□□ -0.8
NPAS4-201ENST00000311034 M0R2P5 195 aa10.02□□□□□ -0.81
NPAS4-201ENST00000311034 GAGE5Q13069 117 aa10.02□□□□□ -0.81
NPAS4-201ENST00000311034 GAGE6Q13070 117 aa10.02□□□□□ -0.81
NPAS4-201ENST00000311034 MEIG1Q5JSS6 88 aa10.02□□□□□ -0.81
NPAS4-201ENST00000311034 FAM19A4Q96LR4 140 aa10.02□□□□□ -0.81
NPAS4-201ENST00000311034 TRGV1A0A0A0MS02 117 aa10.01□□□□□ -0.81
NPAS4-201ENST00000311034 LGALS9O00182 355 aa10.01□□□□□ -0.81
NPAS4-201ENST00000311034 RPL35AP18077 110 aaKnown RBP10.01□□□□□ -0.81
NPAS4-201ENST00000311034 NBEAL1Q6ZS30 2694 aa10□□□□□ -0.81
NPAS4-201ENST00000311034 CCDC179H3BU77 68 aa10□□□□□ -0.81
NPAS4-201ENST00000311034 NDUFA7O95182 113 aa10□□□□□ -0.81
NPAS4-201ENST00000311034 COX6CP09669 75 aa10□□□□□ -0.81
NPAS4-201ENST00000311034 A0A096LPF7 62 aa10□□□□□ -0.81
NPAS4-201ENST00000311034 HOXD3P31249 432 aaPredicted RBP10□□□□□ -0.81
NPAS4-201ENST00000311034 ADAMTSL4-AS1Q5T5F5 129 aa10□□□□□ -0.81
NPAS4-201ENST00000311034 NXPH4O95158 308 aa10□□□□□ -0.81
NPAS4-201ENST00000311034 DCANP1Q8TF63 244 aa10□□□□□ -0.81
NPAS4-201ENST00000311034 NDUFV3P56181 108 aaKnown RBP9.99□□□□□ -0.81
NPAS4-201ENST00000311034 ICOSQ9Y6W8 199 aa9.99□□□□□ -0.81
NPAS4-201ENST00000311034 IFITM1P13164 125 aa9.99□□□□□ -0.81
NPAS4-201ENST00000311034 RHOHQ15669 191 aa9.99□□□□□ -0.81
NPAS4-201ENST00000311034 A0A0B4J2C4 111 aa9.99□□□□□ -0.81
NPAS4-201ENST00000311034 IGHG2P01859 326 aa9.99□□□□□ -0.81
NPAS4-201ENST00000311034 SBSPONQ8IVN8 264 aa9.99□□□□□ -0.81
NPAS4-201ENST00000311034 RPL13AP40429 203 aaKnown RBP9.98□□□□□ -0.81
NPAS4-201ENST00000311034 NSUN5P1Q3KNT7 163 aa9.98□□□□□ -0.81
NPAS4-201ENST00000311034 A0A0J9YX75 114 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms