RNA–Protein interactions for RNA: ENST00000309862.10

PGAP3-202, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 2

Gene PGAP3, Length 3,028 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-202ENST00000309862 ITPR1Q14643 2758 aa11.34□□□□□ -0.59
PGAP3-202ENST00000309862 TRAV8-4A0A0B4J246 113 aa11.34□□□□□ -0.59
PGAP3-202ENST00000309862 AVPP01185 164 aa11.34□□□□□ -0.59
PGAP3-202ENST00000309862 K7EMT4 169 aa11.33□□□□□ -0.6
PGAP3-202ENST00000309862 RBMY1A1P0DJD3 496 aaKnown RBP11.33□□□□□ -0.6
PGAP3-202ENST00000309862 RBMY1CP0DJD4 496 aa11.33□□□□□ -0.6
PGAP3-202ENST00000309862 RBMY1FQ15415 496 aaKnown RBP11.33□□□□□ -0.6
PGAP3-202ENST00000309862 ICOSQ9Y6W8 199 aa11.33□□□□□ -0.6
PGAP3-202ENST00000309862 FLNCQ14315 2725 aa11.33□□□□□ -0.6
PGAP3-202ENST00000309862 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.33□□□□□ -0.6
PGAP3-202ENST00000309862 IGHV3-38A0A0C4DH36 116 aa11.33□□□□□ -0.6
PGAP3-202ENST00000309862 TRBV10-2A0A0K0K1G8 114 aa11.33□□□□□ -0.6
PGAP3-202ENST00000309862 IGKV2-29A2NJV5 120 aaPredicted RBP11.33□□□□□ -0.6
PGAP3-202ENST00000309862 C15orf53Q8NAA6 179 aa11.33□□□□□ -0.6
PGAP3-202ENST00000309862 ODF3Q96PU9 254 aa11.33□□□□□ -0.6
PGAP3-202ENST00000309862 USP9XQ93008 2570 aaPredicted RBP11.33□□□□□ -0.6
PGAP3-202ENST00000309862 GAGE5Q13069 117 aa11.33□□□□□ -0.6
PGAP3-202ENST00000309862 GAGE6Q13070 117 aa11.33□□□□□ -0.6
PGAP3-202ENST00000309862 TTC32Q5I0X7 151 aa11.33□□□□□ -0.6
PGAP3-202ENST00000309862 A0A0U1RRA0 63 aa11.32□□□□□ -0.6
PGAP3-202ENST00000309862 H3BMM0 161 aa11.32□□□□□ -0.6
PGAP3-202ENST00000309862 BRI3O95415 125 aa11.32□□□□□ -0.6
PGAP3-202ENST00000309862 NDUFV3P56181 108 aaKnown RBP11.32□□□□□ -0.6
PGAP3-202ENST00000309862 UBE2WQ96B02 151 aa11.32□□□□□ -0.6
PGAP3-202ENST00000309862 TRBV30A0A0K0K1B3 111 aa11.32□□□□□ -0.6
PGAP3-202ENST00000309862 H7C423 109 aa11.32□□□□□ -0.6
PGAP3-202ENST00000309862 K7EQG2 157 aa11.32□□□□□ -0.6
PGAP3-202ENST00000309862 Q6ZSN1 163 aa11.32□□□□□ -0.6
PGAP3-202ENST00000309862 DUX3Q96PT4 197 aa11.32□□□□□ -0.6
PGAP3-202ENST00000309862 IGHV4-30-2A0A087WSY4 118 aa11.31□□□□□ -0.6
PGAP3-202ENST00000309862 PIMREGQ9BSJ6 248 aa11.31□□□□□ -0.6
PGAP3-202ENST00000309862 TNFRSF18Q9Y5U5 241 aa11.31□□□□□ -0.6
PGAP3-202ENST00000309862 CCDC179H3BU77 68 aa11.31□□□□□ -0.6
PGAP3-202ENST00000309862 CFHR3Q02985 330 aa11.31□□□□□ -0.6
PGAP3-202ENST00000309862 IGHV1-58A0A0C4DH39 117 aa11.3□□□□□ -0.6
PGAP3-202ENST00000309862 IGHV4-59P01825 116 aa11.3□□□□□ -0.6
PGAP3-202ENST00000309862 MRPS36P82909 103 aaKnown RBP11.3□□□□□ -0.6
PGAP3-202ENST00000309862 PSMB8P28062 276 aa11.3□□□□□ -0.6
PGAP3-202ENST00000309862 ZNF625Q96I27 306 aaPredicted RBP11.29□□□□□ -0.6
PGAP3-202ENST00000309862 CACNA1AO00555 2505 aa11.29□□□□□ -0.6
PGAP3-202ENST00000309862 VSIG2Q96IQ7 327 aa11.29□□□□□ -0.6
PGAP3-202ENST00000309862 M0QXV9 152 aa11.28□□□□□ -0.6
PGAP3-202ENST00000309862 IFITM1P13164 125 aa11.28□□□□□ -0.6
PGAP3-202ENST00000309862 MXRA5Q9NR99 2828 aa11.28□□□□□ -0.6
PGAP3-202ENST00000309862 RPL13AP40429 203 aaKnown RBP11.27□□□□□ -0.6
PGAP3-202ENST00000309862 ATP5J2P56134 94 aa11.27□□□□□ -0.6
PGAP3-202ENST00000309862 MIAQ16674 131 aa11.27□□□□□ -0.6
PGAP3-202ENST00000309862 TRGV11A0A075B6L2 103 aa11.27□□□□□ -0.61
PGAP3-202ENST00000309862 COX6CP09669 75 aa11.27□□□□□ -0.61
PGAP3-202ENST00000309862 C10orf105Q8TEF2 133 aa11.27□□□□□ -0.61
PGAP3-202ENST00000309862 LINC00467Q9BRT7 94 aa11.27□□□□□ -0.61
PGAP3-202ENST00000309862 MSMBP08118 114 aa11.26□□□□□ -0.61
PGAP3-202ENST00000309862 GNLYP22749 145 aa11.26□□□□□ -0.61
PGAP3-202ENST00000309862 CCL19Q99731 98 aa11.26□□□□□ -0.61
PGAP3-202ENST00000309862 CDKN2A-AS1Q9UH64 79 aa11.26□□□□□ -0.61
PGAP3-202ENST00000309862 PYGO1Q9Y3Y4 419 aa11.26□□□□□ -0.61
PGAP3-202ENST00000309862 DEFB131AP59861 70 aa11.26□□□□□ -0.61
PGAP3-202ENST00000309862 SVIPQ8NHG7 77 aa11.26□□□□□ -0.61
PGAP3-202ENST00000309862 WNK1Q9H4A3 2382 aa11.26□□□□□ -0.61
PGAP3-202ENST00000309862 CFAP46Q8IYW2 2715 aa11.25□□□□□ -0.61
PGAP3-202ENST00000309862 CHCHD7Q9BUK0 85 aa11.25□□□□□ -0.61
PGAP3-202ENST00000309862 FAM208BQ5VWN6 2430 aa11.25□□□□□ -0.61
PGAP3-202ENST00000309862 GAGE12JA6NER3 117 aa11.25□□□□□ -0.61
PGAP3-202ENST00000309862 GAGE7O76087 117 aa11.25□□□□□ -0.61
PGAP3-202ENST00000309862 GAGE12FP0CL80 117 aa11.25□□□□□ -0.61
PGAP3-202ENST00000309862 GAGE12GP0CL81 117 aa11.25□□□□□ -0.61
PGAP3-202ENST00000309862 GAGE12IP0CL82 117 aa11.25□□□□□ -0.61
PGAP3-202ENST00000309862 GAGE4Q13068 117 aa11.25□□□□□ -0.61
PGAP3-202ENST00000309862 DEFB112Q30KQ8 113 aa11.25□□□□□ -0.61
PGAP3-202ENST00000309862 HIST2H2BDQ6DRA6 164 aa11.25□□□□□ -0.61
PGAP3-202ENST00000309862 TMEM61Q8N0U2 210 aa11.25□□□□□ -0.61
PGAP3-202ENST00000309862 UBE2D4Q9Y2X8 147 aa11.25□□□□□ -0.61
PGAP3-202ENST00000309862 ZFYVE26Q68DK2 2539 aa11.25□□□□□ -0.61
PGAP3-202ENST00000309862 UCNP55089 124 aa11.25□□□□□ -0.61
PGAP3-202ENST00000309862 DEFB136Q30KP8 78 aa11.25□□□□□ -0.61
PGAP3-202ENST00000309862 SPANXDQ9BXN6 97 aa11.25□□□□□ -0.61
PGAP3-202ENST00000309862 SPANXCQ9NY87 97 aa11.25□□□□□ -0.61
PGAP3-202ENST00000309862 TLN2Q9Y4G6 2542 aa11.24□□□□□ -0.61
PGAP3-202ENST00000309862 MYO18BQ8IUG5 2567 aa11.24□□□□□ -0.61
PGAP3-202ENST00000309862 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.24□□□□□ -0.61
PGAP3-202ENST00000309862 PKD1L2Q7Z442 2459 aa11.24□□□□□ -0.61
PGAP3-202ENST00000309862 SETD2Q9BYW2 2564 aaPredicted RBP11.24□□□□□ -0.61
PGAP3-202ENST00000309862 HOXD3P31249 432 aaPredicted RBP11.24□□□□□ -0.61
PGAP3-202ENST00000309862 MAPK1IP1LQ8NDC0 245 aa11.23□□□□□ -0.61
PGAP3-202ENST00000309862 NRGNQ92686 78 aa11.23□□□□□ -0.61
PGAP3-202ENST00000309862 TINCRA0A1B0GVN0 87 aa11.23□□□□□ -0.61
PGAP3-202ENST00000309862 LST1O00453 97 aa11.22□□□□□ -0.61
PGAP3-202ENST00000309862 C3orf56Q8N813 242 aa11.22□□□□□ -0.61
PGAP3-202ENST00000309862 COX6A2Q02221 97 aa11.22□□□□□ -0.61
PGAP3-202ENST00000309862 RBMY1BA6NDE4 496 aaKnown RBP11.22□□□□□ -0.61
PGAP3-202ENST00000309862 RBMY1EA6NEQ0 496 aaKnown RBP11.22□□□□□ -0.61
PGAP3-202ENST00000309862 NDUFA7O95182 113 aa11.22□□□□□ -0.61
PGAP3-202ENST00000309862 RBMY1DP0C7P1 496 aaKnown RBP11.22□□□□□ -0.61
PGAP3-202ENST00000309862 C18orf65Q6ZTR6 163 aa11.22□□□□□ -0.61
PGAP3-202ENST00000309862 ACACBO00763 2458 aa11.21□□□□□ -0.61
PGAP3-202ENST00000309862 DGAT2L7PQ6IED9 249 aa11.21□□□□□ -0.61
PGAP3-202ENST00000309862 TMEM101Q96IK0 257 aa11.21□□□□□ -0.62
PGAP3-202ENST00000309862 H3BT86 120 aa11.2□□□□□ -0.62
PGAP3-202ENST00000309862 CITED2Q99967 270 aaPredicted RBP11.2□□□□□ -0.62
PGAP3-202ENST00000309862 SLURP1P55000 103 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms