RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 CFAP126Q5VTH2 177 aa9.53□□□□□ -0.88
RETREG3-201ENST00000309428 C18orf65Q6ZTR6 163 aa9.53□□□□□ -0.88
RETREG3-201ENST00000309428 Q8N6K4 173 aa9.53□□□□□ -0.88
RETREG3-201ENST00000309428 MDFICQ9P1T7 246 aa9.53□□□□□ -0.88
RETREG3-201ENST00000309428 UBR5O95071 2799 aaPredicted RBP9.53□□□□□ -0.88
RETREG3-201ENST00000309428 HOXD3P31249 432 aaPredicted RBP9.53□□□□□ -0.88
RETREG3-201ENST00000309428 HERV-K104P63124 156 aa9.53□□□□□ -0.88
RETREG3-201ENST00000309428 NEXN-AS1Q8NBZ9 246 aa9.53□□□□□ -0.88
RETREG3-201ENST00000309428 A0A0J9YY99 117 aa9.53□□□□□ -0.88
RETREG3-201ENST00000309428 SRSF2Q01130 221 aaKnown RBP9.53□□□□□ -0.88
RETREG3-201ENST00000309428 UBE2E2Q96LR5 201 aa9.53□□□□□ -0.88
RETREG3-201ENST00000309428 Q8N1Y9 231 aa9.52□□□□□ -0.88
RETREG3-201ENST00000309428 SPATA25Q9BR10 227 aa9.52□□□□□ -0.88
RETREG3-201ENST00000309428 MRPL23Q16540 153 aaKnown RBP9.52□□□□□ -0.89
RETREG3-201ENST00000309428 B4DSR2 109 aa9.52□□□□□ -0.89
RETREG3-201ENST00000309428 C10orf105Q8TEF2 133 aa9.52□□□□□ -0.89
RETREG3-201ENST00000309428 C9orf153Q5TBE3 101 aa9.51□□□□□ -0.89
RETREG3-201ENST00000309428 PRIMA1Q86XR5 153 aa9.51□□□□□ -0.89
RETREG3-201ENST00000309428 DAZ1Q9NQZ3 744 aaKnown RBP9.51□□□□□ -0.89
RETREG3-201ENST00000309428 IGHV7-4-1A0A0J9YVY3 117 aa9.51□□□□□ -0.89
RETREG3-201ENST00000309428 SLURP1P55000 103 aa9.51□□□□□ -0.89
RETREG3-201ENST00000309428 Q6ZSV7 163 aa9.51□□□□□ -0.89
RETREG3-201ENST00000309428 TRAV12-1A0A0B4J245 112 aa9.5□□□□□ -0.89
RETREG3-201ENST00000309428 CCDC179H3BU77 68 aa9.5□□□□□ -0.89
RETREG3-201ENST00000309428 TCTEX1D4Q5JR98 221 aa9.5□□□□□ -0.89
RETREG3-201ENST00000309428 ZNF580Q9UK33 172 aa9.5□□□□□ -0.89
RETREG3-201ENST00000309428 MUC4Q99102 2169 aa9.5□□□□□ -0.89
RETREG3-201ENST00000309428 UBE2L6O14933 153 aa9.5□□□□□ -0.89
RETREG3-201ENST00000309428 DEFB131AP59861 70 aa9.5□□□□□ -0.89
RETREG3-201ENST00000309428 APRG1Q8IVJ8 170 aa9.5□□□□□ -0.89
RETREG3-201ENST00000309428 CHCHD5Q9BSY4 110 aa9.5□□□□□ -0.89
RETREG3-201ENST00000309428 PIFOQ8TCI5 191 aa9.49□□□□□ -0.89
RETREG3-201ENST00000309428 TMEM141Q96I45 108 aa9.49□□□□□ -0.89
RETREG3-201ENST00000309428 HIST1H4AP62805 103 aaKnown RBP9.48□□□□□ -0.89
RETREG3-201ENST00000309428 FAM236AA0A1B0GUQ0 79 aa9.48□□□□□ -0.89
RETREG3-201ENST00000309428 FAM236BA0A1B0GV22 79 aa9.48□□□□□ -0.89
RETREG3-201ENST00000309428 C9orf47Q6ZRZ4 202 aa9.48□□□□□ -0.89
RETREG3-201ENST00000309428 I3L3M4 83 aa9.48□□□□□ -0.89
RETREG3-201ENST00000309428 NDUFV3P56181 108 aaKnown RBP9.48□□□□□ -0.89
RETREG3-201ENST00000309428 CFHR3Q02985 330 aa9.48□□□□□ -0.89
RETREG3-201ENST00000309428 LINC00158P58513 81 aa9.47□□□□□ -0.89
RETREG3-201ENST00000309428 TSPEAR-AS2P59090 65 aa9.47□□□□□ -0.89
RETREG3-201ENST00000309428 Q96MF0 132 aa9.47□□□□□ -0.89
RETREG3-201ENST00000309428 SETXQ7Z333 2677 aaKnown RBP9.47□□□□□ -0.89
RETREG3-201ENST00000309428 SMCPP49901 116 aaPredicted RBP9.47□□□□□ -0.89
RETREG3-201ENST00000309428 TMEM101Q96IK0 257 aa9.47□□□□□ -0.89
RETREG3-201ENST00000309428 BBC3Q96PG8 261 aaPredicted RBP9.47□□□□□ -0.89
RETREG3-201ENST00000309428 XCL2Q9UBD3 114 aa9.47□□□□□ -0.89
RETREG3-201ENST00000309428 IGHV4OR15-8A0A075B7B6 117 aa9.46□□□□□ -0.89
RETREG3-201ENST00000309428 IGHV1OR15-1A0A075B7D0 117 aa9.46□□□□□ -0.89
RETREG3-201ENST00000309428 A0A087WW49 117 aa9.46□□□□□ -0.89
RETREG3-201ENST00000309428 TRGV1A0A0A0MS02 117 aa9.46□□□□□ -0.89
RETREG3-201ENST00000309428 EBI3Q14213 229 aa9.46□□□□□ -0.89
RETREG3-201ENST00000309428 ZFAND2AQ8N6M9 145 aa9.46□□□□□ -0.89
RETREG3-201ENST00000309428 CITED1Q99966 193 aa9.46□□□□□ -0.89
RETREG3-201ENST00000309428 PROK1P58294 105 aa9.46□□□□□ -0.89
RETREG3-201ENST00000309428 CDIP1Q9H305 208 aa9.46□□□□□ -0.89
RETREG3-201ENST00000309428 ZNRF2Q8NHG8 242 aa9.46□□□□□ -0.9
RETREG3-201ENST00000309428 PRORYQ9H606 182 aa9.46□□□□□ -0.9
RETREG3-201ENST00000309428 ZMAT4Q9H898 229 aa9.46□□□□□ -0.9
RETREG3-201ENST00000309428 FAM223BA6NKX1 122 aa9.45□□□□□ -0.9
RETREG3-201ENST00000309428 CRLF1O75462 422 aa9.45□□□□□ -0.9
RETREG3-201ENST00000309428 PFN2P35080 140 aa9.45□□□□□ -0.9
RETREG3-201ENST00000309428 FAM223AQ8IWN6 122 aa9.45□□□□□ -0.9
RETREG3-201ENST00000309428 SLC25A29Q8N8R3 303 aa9.45□□□□□ -0.9
RETREG3-201ENST00000309428 APCP25054 2843 aa9.45□□□□□ -0.9
RETREG3-201ENST00000309428 TRGV11A0A075B6L2 103 aa9.45□□□□□ -0.9
RETREG3-201ENST00000309428 IGHV3-30-3P0DP02 117 aa9.45□□□□□ -0.9
RETREG3-201ENST00000309428 TMEM190Q8WZ59 177 aa9.45□□□□□ -0.9
RETREG3-201ENST00000309428 Q9H8V8 135 aa9.45□□□□□ -0.9
RETREG3-201ENST00000309428 ICOSQ9Y6W8 199 aa9.45□□□□□ -0.9
RETREG3-201ENST00000309428 NDUFA4O00483 81 aa9.45□□□□□ -0.9
RETREG3-201ENST00000309428 TINCRA0A1B0GVN0 87 aa9.44□□□□□ -0.9
RETREG3-201ENST00000309428 TRIAP1O43715 76 aa9.44□□□□□ -0.9
RETREG3-201ENST00000309428 IGHV3-33P01772 117 aa9.44□□□□□ -0.9
RETREG3-201ENST00000309428 PAX4O43316 350 aa9.44□□□□□ -0.9
RETREG3-201ENST00000309428 IGLV2-18A0A075B6J9 118 aa9.44□□□□□ -0.9
RETREG3-201ENST00000309428 TRGV2A0A075B6R0 118 aa9.44□□□□□ -0.9
RETREG3-201ENST00000309428 RHODO00212 210 aa9.44□□□□□ -0.9
RETREG3-201ENST00000309428 IGHV3-30P01768 117 aa9.44□□□□□ -0.9
RETREG3-201ENST00000309428 IGHV3-30-5P0DP03 117 aa9.44□□□□□ -0.9
RETREG3-201ENST00000309428 YAE1D1Q9NRH1 226 aa9.44□□□□□ -0.9
RETREG3-201ENST00000309428 LEPROTO15243 131 aa9.43□□□□□ -0.9
RETREG3-201ENST00000309428 ATP6V0E2Q8NHE4 81 aa9.43□□□□□ -0.9
RETREG3-201ENST00000309428 RNASE3P12724 160 aaKnown RBP9.43□□□□□ -0.9
RETREG3-201ENST00000309428 IGHG2P01859 326 aa9.42□□□□□ -0.9
RETREG3-201ENST00000309428 IGKV3D-7A0A0C4DH55 119 aa9.42□□□□□ -0.9
RETREG3-201ENST00000309428 A0A0J9YXY3 114 aa9.42□□□□□ -0.9
RETREG3-201ENST00000309428 GPHB5Q86YW7 130 aa9.42□□□□□ -0.9
RETREG3-201ENST00000309428 Q9HAA7 133 aa9.42□□□□□ -0.9
RETREG3-201ENST00000309428 LINC01356Q8N9X3 169 aa9.41□□□□□ -0.9
RETREG3-201ENST00000309428 USMG5Q96IX5 58 aa9.41□□□□□ -0.9
RETREG3-201ENST00000309428 CNFNQ9BYD5 112 aa9.41□□□□□ -0.9
RETREG3-201ENST00000309428 A6NDX4 124 aa9.41□□□□□ -0.9
RETREG3-201ENST00000309428 ZNF22P17026 224 aaPredicted RBP9.41□□□□□ -0.9
RETREG3-201ENST00000309428 NBPF19A0A087WUL8 3843 aa9.41□□□□□ -0.9
RETREG3-201ENST00000309428 TRBV10-2A0A0K0K1G8 114 aa9.41□□□□□ -0.9
RETREG3-201ENST00000309428 PRO0461Q9UI25 63 aa9.41□□□□□ -0.9
RETREG3-201ENST00000309428 RPL35AP18077 110 aaKnown RBP9.4□□□□□ -0.9
RETREG3-201ENST00000309428 UBE2D1P51668 147 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms