RNA–Protein interactions for RNA: ENST00000307179.8

USP8-201, Transcript of ubiquitin specific peptidase 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP8, Length 4,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-201ENST00000307179 UPK3BQ9BT76 320 aa3.94□□□□□ -1.78
USP8-201ENST00000307179 TRAV12-3A0A0B4J271 114 aa3.93□□□□□ -1.78
USP8-201ENST00000307179 hADV29S1A0JD25 119 aa3.93□□□□□ -1.78
USP8-201ENST00000307179 CRPP02741 224 aa3.93□□□□□ -1.78
USP8-201ENST00000307179 JPT2Q9H910 190 aa3.93□□□□□ -1.78
USP8-201ENST00000307179 IGHV3OR16-10A0A075B7F0 116 aa3.93□□□□□ -1.78
USP8-201ENST00000307179 CEMP1Q6PRD7 247 aaPredicted RBP3.93□□□□□ -1.78
USP8-201ENST00000307179 DSPP15924 2871 aaKnown RBP3.93□□□□□ -1.78
USP8-201ENST00000307179 UNQ9165/PRO28630Q6UXU0 137 aa3.93□□□□□ -1.78
USP8-201ENST00000307179 DUX5Q96PT3 197 aa3.93□□□□□ -1.78
USP8-201ENST00000307179 KLK5Q9Y337 293 aaPredicted RBP3.93□□□□□ -1.78
USP8-201ENST00000307179 IGLV1-40P01703 118 aa3.92□□□□□ -1.78
USP8-201ENST00000307179 PSMB8P28062 276 aa3.92□□□□□ -1.78
USP8-201ENST00000307179 ATP5EP56381 51 aaPredicted RBP3.92□□□□□ -1.78
USP8-201ENST00000307179 ZNF625Q96I27 306 aaPredicted RBP3.92□□□□□ -1.78
USP8-201ENST00000307179 A0A1W2PRX2 142 aa3.92□□□□□ -1.78
USP8-201ENST00000307179 K7ENP7 123 aa3.92□□□□□ -1.78
USP8-201ENST00000307179 K7EQG2 157 aa3.92□□□□□ -1.78
USP8-201ENST00000307179 SMG1Q96Q15 3661 aaKnown RBP3.92□□□□□ -1.78
USP8-201ENST00000307179 F6UB75 175 aa3.91□□□□□ -1.78
USP8-201ENST00000307179 H3BQ85 93 aa3.91□□□□□ -1.78
USP8-201ENST00000307179 IGHV3-53P01767 116 aa3.91□□□□□ -1.78
USP8-201ENST00000307179 ATP5J2P56134 94 aa3.91□□□□□ -1.78
USP8-201ENST00000307179 SYNJ2BPP57105 145 aa3.91□□□□□ -1.78
USP8-201ENST00000307179 Q9H8V8 135 aa3.91□□□□□ -1.78
USP8-201ENST00000307179 TRAV13-1A0A0B4J241 112 aa3.91□□□□□ -1.78
USP8-201ENST00000307179 ADARB2-AS1A8MUL3 147 aa3.91□□□□□ -1.78
USP8-201ENST00000307179 JMJD7-PLA2G4BH0Y9G9 81 aa3.91□□□□□ -1.78
USP8-201ENST00000307179 DMXL1Q9Y485 3027 aa3.91□□□□□ -1.78
USP8-201ENST00000307179 CFHR3Q02985 330 aa3.91□□□□□ -1.78
USP8-201ENST00000307179 DEFB124Q8NES8 71 aa3.91□□□□□ -1.78
USP8-201ENST00000307179 C22orf24Q9Y442 160 aa3.91□□□□□ -1.78
USP8-201ENST00000307179 EPM2AB3EWF7 344 aa3.9□□□□□ -1.78
USP8-201ENST00000307179 USP17L23D6RBM5 183 aa3.9□□□□□ -1.78
USP8-201ENST00000307179 SPRY2O43597 315 aa3.9□□□□□ -1.78
USP8-201ENST00000307179 ZFP36P26651 326 aaKnown RBP3.9□□□□□ -1.78
USP8-201ENST00000307179 LINC00167Q96N53 147 aa3.9□□□□□ -1.78
USP8-201ENST00000307179 ABCA1O95477 2261 aa3.9□□□□□ -1.78
USP8-201ENST00000307179 DMXL2Q8TDJ6 3036 aa3.9□□□□□ -1.78
USP8-201ENST00000307179 TRBV10-1A0A0K0K1A3 114 aa3.9□□□□□ -1.78
USP8-201ENST00000307179 LOC107984640A0A0U1RRK4 108 aa3.9□□□□□ -1.78
USP8-201ENST00000307179 SMIM1B2RUZ4 78 aa3.9□□□□□ -1.78
USP8-201ENST00000307179 RS1O15537 224 aa3.9□□□□□ -1.78
USP8-201ENST00000307179 UCNP55089 124 aa3.9□□□□□ -1.78
USP8-201ENST00000307179 NPC2P61916 151 aa3.9□□□□□ -1.78
USP8-201ENST00000307179 DGAT2L7PQ6IED9 249 aa3.9□□□□□ -1.78
USP8-201ENST00000307179 CDKN2A-AS1Q9UH64 79 aa3.9□□□□□ -1.78
USP8-201ENST00000307179 SERP1Q9Y6X1 66 aa3.9□□□□□ -1.78
USP8-201ENST00000307179 SPENQ96T58 3664 aaKnown RBP3.9□□□□□ -1.78
USP8-201ENST00000307179 COL12A1Q99715 3063 aa3.9□□□□□ -1.79
USP8-201ENST00000307179 RBMY1BA6NDE4 496 aaKnown RBP3.9□□□□□ -1.79
USP8-201ENST00000307179 A6NDX4 124 aa3.9□□□□□ -1.79
USP8-201ENST00000307179 RBMY1EA6NEQ0 496 aaKnown RBP3.9□□□□□ -1.79
USP8-201ENST00000307179 RBMY1DP0C7P1 496 aaKnown RBP3.9□□□□□ -1.79
USP8-201ENST00000307179 RBMY1A1P0DJD3 496 aaKnown RBP3.9□□□□□ -1.79
USP8-201ENST00000307179 RBMY1CP0DJD4 496 aa3.9□□□□□ -1.79
USP8-201ENST00000307179 Q8NA96 180 aa3.9□□□□□ -1.79
USP8-201ENST00000307179 LYPD5Q6UWN5 251 aa3.9□□□□□ -1.79
USP8-201ENST00000307179 CCKP06307 115 aa3.89□□□□□ -1.79
USP8-201ENST00000307179 ICE1Q9Y2F5 2266 aa3.89□□□□□ -1.79
USP8-201ENST00000307179 KIR2DL5BQ8NHK3 375 aa3.89□□□□□ -1.79
USP8-201ENST00000307179 LY6G6DO95868 133 aa3.89□□□□□ -1.79
USP8-201ENST00000307179 TRBV12-3P01733 135 aa3.89□□□□□ -1.79
USP8-201ENST00000307179 KLRB1Q12918 225 aa3.89□□□□□ -1.79
USP8-201ENST00000307179 Q8N2B8 174 aa3.89□□□□□ -1.79
USP8-201ENST00000307179 LINC01560Q8TB33 94 aa3.89□□□□□ -1.79
USP8-201ENST00000307179 ORMDL1Q9P0S3 153 aa3.89□□□□□ -1.79
USP8-201ENST00000307179 NDUFC1O43677 76 aa3.88□□□□□ -1.79
USP8-201ENST00000307179 LINC00242Q5T6M2 205 aa3.88□□□□□ -1.79
USP8-201ENST00000307179 C3orf56Q8N813 242 aa3.88□□□□□ -1.79
USP8-201ENST00000307179 SPTBN2O15020 2390 aa3.88□□□□□ -1.79
USP8-201ENST00000307179 TRAV12-2A0A075B6T6 113 aa3.88□□□□□ -1.79
USP8-201ENST00000307179 IBA57-AS1B1ANH7 110 aa3.88□□□□□ -1.79
USP8-201ENST00000307179 F5H768 121 aa3.88□□□□□ -1.79
USP8-201ENST00000307179 RBMY1FQ15415 496 aaKnown RBP3.88□□□□□ -1.79
USP8-201ENST00000307179 SOSTDC1Q6X4U4 206 aa3.88□□□□□ -1.79
USP8-201ENST00000307179 Q6ZSV7 163 aa3.88□□□□□ -1.79
USP8-201ENST00000307179 C11orf44Q8N8P7 122 aa3.88□□□□□ -1.79
USP8-201ENST00000307179 FAM236DA0A1B0GTK5 79 aa3.88□□□□□ -1.79
USP8-201ENST00000307179 FAM236CP0DP71 79 aa3.88□□□□□ -1.79
USP8-201ENST00000307179 LMO4P61968 165 aa3.88□□□□□ -1.79
USP8-201ENST00000307179 IGHV3OR16-12A0A075B7B8 117 aa3.87□□□□□ -1.79
USP8-201ENST00000307179 Q5XG85 94 aa3.87□□□□□ -1.79
USP8-201ENST00000307179 LINC01561Q8N1V8 128 aa3.87□□□□□ -1.79
USP8-201ENST00000307179 FAM218AQ96MZ4 157 aa3.87□□□□□ -1.79
USP8-201ENST00000307179 PRO0628Q9UI54 55 aa3.87□□□□□ -1.79
USP8-201ENST00000307179 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.87□□□□□ -1.79
USP8-201ENST00000307179 IGKV2-29A2NJV5 120 aaPredicted RBP3.87□□□□□ -1.79
USP8-201ENST00000307179 DEFB1P60022 68 aa3.87□□□□□ -1.79
USP8-201ENST00000307179 SPINK13Q1W4C9 94 aa3.87□□□□□ -1.79
USP8-201ENST00000307179 SVEP1Q4LDE5 3571 aa3.87□□□□□ -1.79
USP8-201ENST00000307179 NACAE9PAV3 2078 aa3.87□□□□□ -1.79
USP8-201ENST00000307179 TRAV7A0A075B6U4 112 aa3.87□□□□□ -1.79
USP8-201ENST00000307179 COX7B2Q8TF08 81 aa3.87□□□□□ -1.79
USP8-201ENST00000307179 SND1-IT1Q9HBX3 110 aa3.87□□□□□ -1.79
USP8-201ENST00000307179 RELNP78509 3460 aa3.87□□□□□ -1.79
USP8-201ENST00000307179 GVINP1Q7Z2Y8 2422 aa3.86□□□□□ -1.79
USP8-201ENST00000307179 PDE6GP18545 87 aa3.86□□□□□ -1.79
USP8-201ENST00000307179 RPL36AP83881 106 aaKnown RBP3.86□□□□□ -1.79
USP8-201ENST00000307179 RPL36ALQ969Q0 106 aaKnown RBP3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms