RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 RPL13AP40429 203 aaKnown RBP10.85□□□□□ -0.67
PTPN9-201ENST00000306726 FHL3Q13643 280 aa10.85□□□□□ -0.67
PTPN9-201ENST00000306726 TAL2Q16559 108 aa10.85□□□□□ -0.67
PTPN9-201ENST00000306726 COX6CP09669 75 aa10.85□□□□□ -0.67
PTPN9-201ENST00000306726 CARD19Q96LW7 228 aa10.85□□□□□ -0.67
PTPN9-201ENST00000306726 CNFNQ9BYD5 112 aa10.85□□□□□ -0.67
PTPN9-201ENST00000306726 NDUFA4O00483 81 aa10.85□□□□□ -0.67
PTPN9-201ENST00000306726 NDUFA7O95182 113 aa10.84□□□□□ -0.67
PTPN9-201ENST00000306726 C15orf53Q8NAA6 179 aa10.84□□□□□ -0.67
PTPN9-201ENST00000306726 Q96MF0 132 aa10.84□□□□□ -0.67
PTPN9-201ENST00000306726 TRAV4A0A0B4J268 109 aa10.84□□□□□ -0.67
PTPN9-201ENST00000306726 PRSS47A8MTI9 375 aa10.84□□□□□ -0.67
PTPN9-201ENST00000306726 SLURP1P55000 103 aa10.84□□□□□ -0.67
PTPN9-201ENST00000306726 IGHV1OR15-1A0A075B7D0 117 aa10.84□□□□□ -0.67
PTPN9-201ENST00000306726 C18orf65Q6ZTR6 163 aa10.84□□□□□ -0.67
PTPN9-201ENST00000306726 PPP1R17O96001 155 aa10.83□□□□□ -0.68
PTPN9-201ENST00000306726 AVPP01185 164 aa10.83□□□□□ -0.68
PTPN9-201ENST00000306726 F8P00451 2351 aa10.83□□□□□ -0.68
PTPN9-201ENST00000306726 A0A096LNT2 108 aa10.83□□□□□ -0.68
PTPN9-201ENST00000306726 IGLV4-69A0A075B6H9 119 aa10.83□□□□□ -0.68
PTPN9-201ENST00000306726 TRGV1A0A0A0MS02 117 aa10.83□□□□□ -0.68
PTPN9-201ENST00000306726 TRAV12-1A0A0B4J245 112 aa10.83□□□□□ -0.68
PTPN9-201ENST00000306726 CRLF1O75462 422 aa10.83□□□□□ -0.68
PTPN9-201ENST00000306726 DEFB112Q30KQ8 113 aa10.83□□□□□ -0.68
PTPN9-201ENST00000306726 FAM223BA6NKX1 122 aa10.82□□□□□ -0.68
PTPN9-201ENST00000306726 TCTEX1D4Q5JR98 221 aa10.82□□□□□ -0.68
PTPN9-201ENST00000306726 HIST2H2BCQ6DN03 193 aa10.82□□□□□ -0.68
PTPN9-201ENST00000306726 FAM223AQ8IWN6 122 aa10.82□□□□□ -0.68
PTPN9-201ENST00000306726 OR13C6PQ8NH95 151 aa10.82□□□□□ -0.68
PTPN9-201ENST00000306726 TMEM190Q8WZ59 177 aa10.82□□□□□ -0.68
PTPN9-201ENST00000306726 FLNAP21333 2647 aaKnown RBP10.81□□□□□ -0.68
PTPN9-201ENST00000306726 IGHV3-30-3P0DP02 117 aa10.81□□□□□ -0.68
PTPN9-201ENST00000306726 PAPPA-AS1Q5QFB9 102 aa10.81□□□□□ -0.68
PTPN9-201ENST00000306726 ZNF48Q96MX3 618 aaPredicted RBP10.81□□□□□ -0.68
PTPN9-201ENST00000306726 CDIP1Q9H305 208 aa10.81□□□□□ -0.68
PTPN9-201ENST00000306726 IGHV3-30P01768 117 aa10.81□□□□□ -0.68
PTPN9-201ENST00000306726 IGHV3-30-5P0DP03 117 aa10.81□□□□□ -0.68
PTPN9-201ENST00000306726 SMIM20Q8N5G0 67 aa10.81□□□□□ -0.68
PTPN9-201ENST00000306726 PRO0461Q9UI25 63 aa10.81□□□□□ -0.68
PTPN9-201ENST00000306726 RNF223E7ERA6 249 aa10.8□□□□□ -0.68
PTPN9-201ENST00000306726 KRTAP1-3Q8IUG1 177 aa10.8□□□□□ -0.68
PTPN9-201ENST00000306726 I3L3M4 83 aa10.8□□□□□ -0.68
PTPN9-201ENST00000306726 LINC01620Q4KN68 170 aa10.79□□□□□ -0.68
PTPN9-201ENST00000306726 GAGE12JA6NER3 117 aa10.79□□□□□ -0.68
PTPN9-201ENST00000306726 ZNF22P17026 224 aaPredicted RBP10.79□□□□□ -0.68
PTPN9-201ENST00000306726 GAGE4Q13068 117 aa10.79□□□□□ -0.68
PTPN9-201ENST00000306726 GAGE5Q13069 117 aa10.79□□□□□ -0.68
PTPN9-201ENST00000306726 ATXN8Q156A1 80 aa10.79□□□□□ -0.68
PTPN9-201ENST00000306726 IGHV4OR15-8A0A075B7B6 117 aa10.79□□□□□ -0.68
PTPN9-201ENST00000306726 A0A087WW49 117 aa10.79□□□□□ -0.68
PTPN9-201ENST00000306726 RHODO00212 210 aa10.79□□□□□ -0.68
PTPN9-201ENST00000306726 TRIAP1O43715 76 aa10.79□□□□□ -0.68
PTPN9-201ENST00000306726 IGHV4-31P0DP07 118 aa10.78□□□□□ -0.68
PTPN9-201ENST00000306726 EBI3Q14213 229 aa10.78□□□□□ -0.68
PTPN9-201ENST00000306726 SLC25A29Q8N8R3 303 aa10.78□□□□□ -0.68
PTPN9-201ENST00000306726 MXRA5Q9NR99 2828 aa10.78□□□□□ -0.68
PTPN9-201ENST00000306726 A0A096LPF7 62 aa10.78□□□□□ -0.68
PTPN9-201ENST00000306726 IGIPA6NJ69 53 aa10.78□□□□□ -0.68
PTPN9-201ENST00000306726 H3BMM0 161 aa10.78□□□□□ -0.68
PTPN9-201ENST00000306726 ADAMTSL4-AS1Q5T5F5 129 aa10.78□□□□□ -0.68
PTPN9-201ENST00000306726 UBE2WQ96B02 151 aa10.78□□□□□ -0.68
PTPN9-201ENST00000306726 PRIMA1Q86XR5 153 aa10.77□□□□□ -0.68
PTPN9-201ENST00000306726 SPATA25Q9BR10 227 aa10.77□□□□□ -0.68
PTPN9-201ENST00000306726 A0A0J9YXY3 114 aa10.77□□□□□ -0.69
PTPN9-201ENST00000306726 RPL35AP18077 110 aaKnown RBP10.77□□□□□ -0.69
PTPN9-201ENST00000306726 PFN2P35080 140 aa10.77□□□□□ -0.69
PTPN9-201ENST00000306726 CLPSL2Q6UWE3 100 aa10.77□□□□□ -0.69
PTPN9-201ENST00000306726 HECTD1Q9ULT8 2610 aa10.77□□□□□ -0.69
PTPN9-201ENST00000306726 CCDC179H3BU77 68 aa10.77□□□□□ -0.69
PTPN9-201ENST00000306726 IGHV3-33P01772 117 aa10.77□□□□□ -0.69
PTPN9-201ENST00000306726 USMG5Q96IX5 58 aa10.77□□□□□ -0.69
PTPN9-201ENST00000306726 Q9H8V8 135 aa10.77□□□□□ -0.69
PTPN9-201ENST00000306726 HELZ2Q9BYK8 2649 aaKnown RBP10.77□□□□□ -0.69
PTPN9-201ENST00000306726 TMEM141Q96I45 108 aa10.76□□□□□ -0.69
PTPN9-201ENST00000306726 TMEM262E9PQX1 116 aa10.76□□□□□ -0.69
PTPN9-201ENST00000306726 M0QY20 66 aa10.76□□□□□ -0.69
PTPN9-201ENST00000306726 C20orf203Q8NBC4 194 aa10.76□□□□□ -0.69
PTPN9-201ENST00000306726 PIFOQ8TCI5 191 aa10.76□□□□□ -0.69
PTPN9-201ENST00000306726 Q9HAA7 133 aa10.76□□□□□ -0.69
PTPN9-201ENST00000306726 CDKN2A-AS1Q9UH64 79 aa10.76□□□□□ -0.69
PTPN9-201ENST00000306726 POLR2KP53803 58 aaKnown RBP10.76□□□□□ -0.69
PTPN9-201ENST00000306726 CHCHD5Q9BSY4 110 aa10.76□□□□□ -0.69
PTPN9-201ENST00000306726 IGLV4-3A0A075B6K6 122 aa10.75□□□□□ -0.69
PTPN9-201ENST00000306726 UBE2D1P51668 147 aa10.75□□□□□ -0.69
PTPN9-201ENST00000306726 EIF4EBP3O60516 100 aaPredicted RBP10.75□□□□□ -0.69
PTPN9-201ENST00000306726 WFDC11Q8NEX6 87 aa10.75□□□□□ -0.69
PTPN9-201ENST00000306726 ITPR3Q14573 2671 aa10.74□□□□□ -0.69
PTPN9-201ENST00000306726 NXPH4O95158 308 aa10.74□□□□□ -0.69
PTPN9-201ENST00000306726 TRGV2A0A075B6R0 118 aa10.74□□□□□ -0.69
PTPN9-201ENST00000306726 C19orf54Q5BKX5 351 aa10.73□□□□□ -0.69
PTPN9-201ENST00000306726 GAGE2AQ6NT46 116 aa10.73□□□□□ -0.69
PTPN9-201ENST00000306726 Q6ZSN1 163 aa10.73□□□□□ -0.69
PTPN9-201ENST00000306726 CIRBPQ14011 172 aaKnown RBP10.73□□□□□ -0.69
PTPN9-201ENST00000306726 MRPL53Q96EL3 112 aaKnown RBP10.73□□□□□ -0.69
PTPN9-201ENST00000306726 LINC00467Q9BRT7 94 aa10.73□□□□□ -0.69
PTPN9-201ENST00000306726 LEPROTO15243 131 aa10.73□□□□□ -0.69
PTPN9-201ENST00000306726 ICOSQ9Y6W8 199 aa10.73□□□□□ -0.69
PTPN9-201ENST00000306726 A0A0J9YX75 114 aa10.72□□□□□ -0.69
PTPN9-201ENST00000306726 PIK3CD-AS1Q5SR53 167 aa10.72□□□□□ -0.69
PTPN9-201ENST00000306726 COX8CQ7Z4L0 72 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 270.7 ms