RNA–Protein interactions for RNA: ENST00000306320.9

RETREG1-201, Transcript of reticulophagy regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG1, Length 3,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-201ENST00000306320 P0DMU3 169 aa13.37□□□□□ -0.27
RETREG1-201ENST00000306320 FAM231AP0DMU4 169 aa13.37□□□□□ -0.27
RETREG1-201ENST00000306320 FAM231CP0DMU5 169 aa13.37□□□□□ -0.27
RETREG1-201ENST00000306320 CD28P10747 220 aa13.37□□□□□ -0.27
RETREG1-201ENST00000306320 KLK5Q9Y337 293 aaPredicted RBP13.37□□□□□ -0.27
RETREG1-201ENST00000306320 EBI3Q14213 229 aa13.35□□□□□ -0.27
RETREG1-201ENST00000306320 TIMM21Q9BVV7 248 aa13.35□□□□□ -0.27
RETREG1-201ENST00000306320 MDFICQ9P1T7 246 aa13.35□□□□□ -0.27
RETREG1-201ENST00000306320 TRBV10-2A0A0K0K1G8 114 aa13.35□□□□□ -0.27
RETREG1-201ENST00000306320 C9orf139Q6ZV77 190 aa13.35□□□□□ -0.27
RETREG1-201ENST00000306320 PRORYQ9H606 182 aa13.35□□□□□ -0.27
RETREG1-201ENST00000306320 ICOSQ9Y6W8 199 aa13.35□□□□□ -0.27
RETREG1-201ENST00000306320 IGHV1-69DA0A0B4J2H0 117 aa13.34□□□□□ -0.27
RETREG1-201ENST00000306320 IGHV1-69P01742 117 aa13.34□□□□□ -0.27
RETREG1-201ENST00000306320 LOC107984640A0A0U1RRK4 108 aa13.34□□□□□ -0.27
RETREG1-201ENST00000306320 C9orf153Q5TBE3 101 aa13.34□□□□□ -0.27
RETREG1-201ENST00000306320 A0A0J9YXY3 114 aa13.33□□□□□ -0.27
RETREG1-201ENST00000306320 H7C423 109 aa13.33□□□□□ -0.27
RETREG1-201ENST00000306320 PRM2P04554 102 aa13.33□□□□□ -0.27
RETREG1-201ENST00000306320 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.33□□□□□ -0.28
RETREG1-201ENST00000306320 PIMREGQ9BSJ6 248 aa13.33□□□□□ -0.28
RETREG1-201ENST00000306320 OOSP1A8MZH6 123 aa13.33□□□□□ -0.28
RETREG1-201ENST00000306320 LGALS9O00182 355 aa13.33□□□□□ -0.28
RETREG1-201ENST00000306320 ADAMTSL4-AS1Q5T5F5 129 aa13.33□□□□□ -0.28
RETREG1-201ENST00000306320 TMEM190Q8WZ59 177 aa13.33□□□□□ -0.28
RETREG1-201ENST00000306320 IGHV3-38A0A0C4DH36 116 aa13.32□□□□□ -0.28
RETREG1-201ENST00000306320 IGHV3-30-3P0DP02 117 aa13.32□□□□□ -0.28
RETREG1-201ENST00000306320 SBSPONQ8IVN8 264 aa13.32□□□□□ -0.28
RETREG1-201ENST00000306320 NDUFA12Q9UI09 145 aa13.32□□□□□ -0.28
RETREG1-201ENST00000306320 MOB4Q9Y3A3 225 aa13.32□□□□□ -0.28
RETREG1-201ENST00000306320 IGHV4-4A0A075B6R2 117 aa13.31□□□□□ -0.28
RETREG1-201ENST00000306320 PPP1R17O96001 155 aa13.31□□□□□ -0.28
RETREG1-201ENST00000306320 LEPROTO15243 131 aa13.31□□□□□ -0.28
RETREG1-201ENST00000306320 SPINK13Q1W4C9 94 aa13.31□□□□□ -0.28
RETREG1-201ENST00000306320 FAM110AQ9BQ89 295 aa13.31□□□□□ -0.28
RETREG1-201ENST00000306320 RHPN1-AS1Q9BWJ2 59 aa13.31□□□□□ -0.28
RETREG1-201ENST00000306320 TMEM141Q96I45 108 aa13.3□□□□□ -0.28
RETREG1-201ENST00000306320 BRI3O95415 125 aa13.3□□□□□ -0.28
RETREG1-201ENST00000306320 PROK1P58294 105 aa13.3□□□□□ -0.28
RETREG1-201ENST00000306320 JMJD1CQ15652 2540 aa13.3□□□□□ -0.28
RETREG1-201ENST00000306320 M0QXV9 152 aa13.3□□□□□ -0.28
RETREG1-201ENST00000306320 AMELXQ99217 191 aa13.3□□□□□ -0.28
RETREG1-201ENST00000306320 TMEM223A0PJW6 202 aa13.29□□□□□ -0.28
RETREG1-201ENST00000306320 IGHV4-59P01825 116 aa13.29□□□□□ -0.28
RETREG1-201ENST00000306320 OVOL1O14753 267 aa13.28□□□□□ -0.28
RETREG1-201ENST00000306320 LINC00694P0DN24 101 aa13.28□□□□□ -0.28
RETREG1-201ENST00000306320 POLR2KP53803 58 aaKnown RBP13.28□□□□□ -0.28
RETREG1-201ENST00000306320 NIPBLQ6KC79 2804 aaeCLIP13.28□□□□□ -0.28
RETREG1-201ENST00000306320 ZNF469Q96JG9 3925 aaPredicted RBP13.28□□□□□ -0.28
RETREG1-201ENST00000306320 EDA2RQ9HAV5 297 aa13.28□□□□□ -0.28
RETREG1-201ENST00000306320 NBPF19A0A087WUL8 3843 aa13.28□□□□□ -0.28
RETREG1-201ENST00000306320 I3L3M4 83 aa13.27□□□□□ -0.28
RETREG1-201ENST00000306320 HOXD3P31249 432 aaPredicted RBP13.27□□□□□ -0.28
RETREG1-201ENST00000306320 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.27□□□□□ -0.29
RETREG1-201ENST00000306320 IGKV2-29A2NJV5 120 aaPredicted RBP13.27□□□□□ -0.29
RETREG1-201ENST00000306320 C10orf105Q8TEF2 133 aa13.26□□□□□ -0.29
RETREG1-201ENST00000306320 TIMM17AQ99595 171 aa13.26□□□□□ -0.29
RETREG1-201ENST00000306320 YAE1D1Q9NRH1 226 aa13.26□□□□□ -0.29
RETREG1-201ENST00000306320 TRBV7-1A0A0A6YYK4 115 aa13.26□□□□□ -0.29
RETREG1-201ENST00000306320 A0A0B4J2C4 111 aa13.26□□□□□ -0.29
RETREG1-201ENST00000306320 TMEM101Q96IK0 257 aa13.26□□□□□ -0.29
RETREG1-201ENST00000306320 CHD6Q8TD26 2715 aa13.26□□□□□ -0.29
RETREG1-201ENST00000306320 SYNJ2BPP57105 145 aa13.25□□□□□ -0.29
RETREG1-201ENST00000306320 MSMBP08118 114 aa13.24□□□□□ -0.29
RETREG1-201ENST00000306320 IGHV3-16A0A0C4DH30 117 aa13.24□□□□□ -0.29
RETREG1-201ENST00000306320 LINC00315P59091 139 aa13.24□□□□□ -0.29
RETREG1-201ENST00000306320 GAGE2AQ6NT46 116 aa13.24□□□□□ -0.29
RETREG1-201ENST00000306320 Q9UF83 564 aa13.24□□□□□ -0.29
RETREG1-201ENST00000306320 VPREB3Q9UKI3 123 aa13.24□□□□□ -0.29
RETREG1-201ENST00000306320 IGLV4-3A0A075B6K6 122 aa13.23□□□□□ -0.29
RETREG1-201ENST00000306320 DEFB112Q30KQ8 113 aa13.23□□□□□ -0.29
RETREG1-201ENST00000306320 NXPH4O95158 308 aa13.23□□□□□ -0.29
RETREG1-201ENST00000306320 DGAT2L7PQ6IED9 249 aa13.23□□□□□ -0.29
RETREG1-201ENST00000306320 C11orf44Q8N8P7 122 aa13.22□□□□□ -0.29
RETREG1-201ENST00000306320 KRTAP10-9P60411 292 aa13.22□□□□□ -0.29
RETREG1-201ENST00000306320 HIST2H2BCQ6DN03 193 aa13.22□□□□□ -0.29
RETREG1-201ENST00000306320 TRAV13-1A0A0B4J241 112 aa13.21□□□□□ -0.29
RETREG1-201ENST00000306320 KHDC1LQ5JSQ8 128 aa13.21□□□□□ -0.29
RETREG1-201ENST00000306320 DEFB136Q30KP8 78 aa13.21□□□□□ -0.29
RETREG1-201ENST00000306320 C20orf203Q8NBC4 194 aa13.21□□□□□ -0.29
RETREG1-201ENST00000306320 MRPL53Q96EL3 112 aaKnown RBP13.21□□□□□ -0.29
RETREG1-201ENST00000306320 Q9HAA7 133 aa13.21□□□□□ -0.29
RETREG1-201ENST00000306320 KIF25-AS1Q9Y6Z4 181 aa13.21□□□□□ -0.29
RETREG1-201ENST00000306320 IGKV3OR2-268A0A0C4DH90 116 aa13.21□□□□□ -0.3
RETREG1-201ENST00000306320 TRBV30A0A0K0K1B3 111 aa13.2□□□□□ -0.3
RETREG1-201ENST00000306320 RHOHQ15669 191 aa13.2□□□□□ -0.3
RETREG1-201ENST00000306320 POM121L12Q8N7R1 296 aa13.19□□□□□ -0.3
RETREG1-201ENST00000306320 BBC3Q96PG8 261 aaPredicted RBP13.19□□□□□ -0.3
RETREG1-201ENST00000306320 TNFRSF18Q9Y5U5 241 aa13.19□□□□□ -0.3
RETREG1-201ENST00000306320 M0QY20 66 aa13.19□□□□□ -0.3
RETREG1-201ENST00000306320 NSUN5P1Q3KNT7 163 aa13.19□□□□□ -0.3
RETREG1-201ENST00000306320 FLNAP21333 2647 aaKnown RBP13.18□□□□□ -0.3
RETREG1-201ENST00000306320 TRBV27A0A0K0K1C4 114 aa13.18□□□□□ -0.3
RETREG1-201ENST00000306320 LENEPQ9Y5L5 61 aa13.17□□□□□ -0.3
RETREG1-201ENST00000306320 IGKV3D-7A0A0C4DH55 119 aa13.17□□□□□ -0.3
RETREG1-201ENST00000306320 HERVK_113P63121 156 aa13.17□□□□□ -0.3
RETREG1-201ENST00000306320 C18orf65Q6ZTR6 163 aa13.16□□□□□ -0.3
RETREG1-201ENST00000306320 IGHV3OR16-12A0A075B7B8 117 aa13.16□□□□□ -0.3
RETREG1-201ENST00000306320 IGHV4OR15-8A0A075B7B6 117 aa13.15□□□□□ -0.3
RETREG1-201ENST00000306320 A0A087WW49 117 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms