RNA–Protein interactions for RNA: ENST00000304523.9

LDB2-201, Transcript of LIM domain binding 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB2, Length 2,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-201ENST00000304523 YAE1D1Q9NRH1 226 aa6.92□□□□□ -1.3
LDB2-201ENST00000304523 IGHV4-38-2P0DP08 117 aa6.91□□□□□ -1.3
LDB2-201ENST00000304523 TRBV7-7A0A0K0K1E9 115 aa6.91□□□□□ -1.3
LDB2-201ENST00000304523 IGKV3-20P01619 116 aa6.91□□□□□ -1.3
LDB2-201ENST00000304523 CLEC2BQ92478 149 aa6.91□□□□□ -1.3
LDB2-201ENST00000304523 ATRXP46100 2492 aa6.9□□□□□ -1.3
LDB2-201ENST00000304523 CEMP1Q6PRD7 247 aaPredicted RBP6.9□□□□□ -1.3
LDB2-201ENST00000304523 Q6ZSV7 163 aa6.9□□□□□ -1.3
LDB2-201ENST00000304523 PSMB8P28062 276 aa6.9□□□□□ -1.31
LDB2-201ENST00000304523 CHCHD7Q9BUK0 85 aa6.9□□□□□ -1.31
LDB2-201ENST00000304523 UBE2D4Q9Y2X8 147 aa6.9□□□□□ -1.31
LDB2-201ENST00000304523 CELSR1Q9NYQ6 3014 aa6.89□□□□□ -1.31
LDB2-201ENST00000304523 MUC6Q6W4X9 2439 aa6.89□□□□□ -1.31
LDB2-201ENST00000304523 IGLV5-45A0A087WSX0 123 aa6.89□□□□□ -1.31
LDB2-201ENST00000304523 A8MZ25 164 aa6.89□□□□□ -1.31
LDB2-201ENST00000304523 FAM110AQ9BQ89 295 aa6.89□□□□□ -1.31
LDB2-201ENST00000304523 SORL1Q92673 2214 aa6.88□□□□□ -1.31
LDB2-201ENST00000304523 RBMY1A1P0DJD3 496 aaKnown RBP6.88□□□□□ -1.31
LDB2-201ENST00000304523 RBMY1CP0DJD4 496 aa6.88□□□□□ -1.31
LDB2-201ENST00000304523 RBMY1FQ15415 496 aaKnown RBP6.88□□□□□ -1.31
LDB2-201ENST00000304523 RNASE13Q5GAN3 156 aaKnown RBP6.88□□□□□ -1.31
LDB2-201ENST00000304523 PIK3CD-AS1Q5SR53 167 aa6.88□□□□□ -1.31
LDB2-201ENST00000304523 TNFRSF18Q9Y5U5 241 aa6.88□□□□□ -1.31
LDB2-201ENST00000304523 IGHV4-61A0A0C4DH41 118 aa6.88□□□□□ -1.31
LDB2-201ENST00000304523 NDUFA1O15239 70 aa6.88□□□□□ -1.31
LDB2-201ENST00000304523 UCNP55089 124 aa6.88□□□□□ -1.31
LDB2-201ENST00000304523 PROK1P58294 105 aa6.88□□□□□ -1.31
LDB2-201ENST00000304523 DUX3Q96PT4 197 aa6.88□□□□□ -1.31
LDB2-201ENST00000304523 CITED2Q99967 270 aaPredicted RBP6.88□□□□□ -1.31
LDB2-201ENST00000304523 NPC2P61916 151 aa6.87□□□□□ -1.31
LDB2-201ENST00000304523 TMEM89A2RUT3 159 aa6.87□□□□□ -1.31
LDB2-201ENST00000304523 ACYP1P07311 99 aa6.87□□□□□ -1.31
LDB2-201ENST00000304523 TIRAPP58753 221 aa6.87□□□□□ -1.31
LDB2-201ENST00000304523 IGHV3-73A0A0B4J1V6 119 aa6.86□□□□□ -1.31
LDB2-201ENST00000304523 TMEM95Q3KNT9 176 aa6.86□□□□□ -1.31
LDB2-201ENST00000304523 PIMREGQ9BSJ6 248 aa6.86□□□□□ -1.31
LDB2-201ENST00000304523 IMUPQ9GZP8 106 aa6.86□□□□□ -1.31
LDB2-201ENST00000304523 A8MTW9 85 aa6.86□□□□□ -1.31
LDB2-201ENST00000304523 TMEM101Q96IK0 257 aa6.86□□□□□ -1.31
LDB2-201ENST00000304523 LINC00467Q9BRT7 94 aa6.86□□□□□ -1.31
LDB2-201ENST00000304523 Q9UF83 564 aa6.86□□□□□ -1.31
LDB2-201ENST00000304523 CDKN2A-AS1Q9UH64 79 aa6.86□□□□□ -1.31
LDB2-201ENST00000304523 IGF2RP11717 2491 aa6.86□□□□□ -1.31
LDB2-201ENST00000304523 COX7A2LO14548 114 aa6.85□□□□□ -1.31
LDB2-201ENST00000304523 MEIG1Q5JSS6 88 aa6.85□□□□□ -1.31
LDB2-201ENST00000304523 Q6ZSN1 163 aa6.85□□□□□ -1.31
LDB2-201ENST00000304523 PRORYQ9H606 182 aa6.85□□□□□ -1.31
LDB2-201ENST00000304523 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.85□□□□□ -1.31
LDB2-201ENST00000304523 IGLV5-39A0A0G2JS06 123 aa6.85□□□□□ -1.31
LDB2-201ENST00000304523 IGKV2-29A2NJV5 120 aaPredicted RBP6.85□□□□□ -1.31
LDB2-201ENST00000304523 DAND5Q8N907 189 aa6.85□□□□□ -1.31
LDB2-201ENST00000304523 LINC00308Q8TCZ7 52 aa6.85□□□□□ -1.31
LDB2-201ENST00000304523 C10orf105Q8TEF2 133 aa6.85□□□□□ -1.31
LDB2-201ENST00000304523 DNAJC30Q96LL9 226 aa6.85□□□□□ -1.31
LDB2-201ENST00000304523 CIRBPQ14011 172 aaKnown RBP6.84□□□□□ -1.31
LDB2-201ENST00000304523 SHISA2Q6UWI4 295 aa6.84□□□□□ -1.31
LDB2-201ENST00000304523 SDIM1Q6ZPB5 146 aa6.84□□□□□ -1.31
LDB2-201ENST00000304523 SMIM20Q8N5G0 67 aa6.84□□□□□ -1.31
LDB2-201ENST00000304523 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.84□□□□□ -1.31
LDB2-201ENST00000304523 IGHV3-53P01767 116 aa6.84□□□□□ -1.31
LDB2-201ENST00000304523 C10orf99Q6UWK7 81 aa6.84□□□□□ -1.31
LDB2-201ENST00000304523 CHCHD5Q9BSY4 110 aa6.84□□□□□ -1.31
LDB2-201ENST00000304523 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.84□□□□□ -1.31
LDB2-201ENST00000304523 KNCNA6PVL3 124 aa6.83□□□□□ -1.32
LDB2-201ENST00000304523 SYNJ2BPP57105 145 aa6.83□□□□□ -1.32
LDB2-201ENST00000304523 C19orf84I3L1E1 186 aa6.83□□□□□ -1.32
LDB2-201ENST00000304523 MSMBP08118 114 aa6.83□□□□□ -1.32
LDB2-201ENST00000304523 BEAN1Q3B7T3 259 aa6.83□□□□□ -1.32
LDB2-201ENST00000304523 FAM19A3Q7Z5A8 133 aa6.83□□□□□ -1.32
LDB2-201ENST00000304523 LINC01587Q99440 93 aa6.83□□□□□ -1.32
LDB2-201ENST00000304523 TRACP01848 142 aa6.82□□□□□ -1.32
LDB2-201ENST00000304523 ZNF415Q09FC8 603 aa6.82□□□□□ -1.32
LDB2-201ENST00000304523 COPS9Q8WXC6 57 aa6.82□□□□□ -1.32
LDB2-201ENST00000304523 TMEM126AQ9H061 195 aa6.82□□□□□ -1.32
LDB2-201ENST00000304523 PPDPFQ9H3Y8 114 aa6.82□□□□□ -1.32
LDB2-201ENST00000304523 Q9H8V8 135 aa6.82□□□□□ -1.32
LDB2-201ENST00000304523 IGHV3OR16-12A0A075B7B8 117 aa6.82□□□□□ -1.32
LDB2-201ENST00000304523 HTN1P15515 57 aa6.82□□□□□ -1.32
LDB2-201ENST00000304523 HERVK_113P63121 156 aa6.82□□□□□ -1.32
LDB2-201ENST00000304523 HERV-K104P63124 156 aa6.82□□□□□ -1.32
LDB2-201ENST00000304523 LINC00643Q86TS7 51 aa6.82□□□□□ -1.32
LDB2-201ENST00000304523 SMCR5Q8TEV8 140 aa6.82□□□□□ -1.32
LDB2-201ENST00000304523 CSPG4Q6UVK1 2322 aa6.81□□□□□ -1.32
LDB2-201ENST00000304523 RBMY1BA6NDE4 496 aaKnown RBP6.81□□□□□ -1.32
LDB2-201ENST00000304523 RBMY1EA6NEQ0 496 aaKnown RBP6.81□□□□□ -1.32
LDB2-201ENST00000304523 AVPP01185 164 aa6.81□□□□□ -1.32
LDB2-201ENST00000304523 RBMY1DP0C7P1 496 aaKnown RBP6.81□□□□□ -1.32
LDB2-201ENST00000304523 COX6A2Q02221 97 aa6.81□□□□□ -1.32
LDB2-201ENST00000304523 LY6DQ14210 128 aa6.81□□□□□ -1.32
LDB2-201ENST00000304523 LINC00242Q5T6M2 205 aa6.81□□□□□ -1.32
LDB2-201ENST00000304523 SOSTDC1Q6X4U4 206 aa6.81□□□□□ -1.32
LDB2-201ENST00000304523 C11orf72Q8NBR9 251 aa6.81□□□□□ -1.32
LDB2-201ENST00000304523 FAM236AA0A1B0GUQ0 79 aa6.81□□□□□ -1.32
LDB2-201ENST00000304523 FAM236BA0A1B0GV22 79 aa6.81□□□□□ -1.32
LDB2-201ENST00000304523 HOXD3P31249 432 aaPredicted RBP6.81□□□□□ -1.32
LDB2-201ENST00000304523 Q8N2B8 174 aa6.81□□□□□ -1.32
LDB2-201ENST00000304523 DUX5Q96PT3 197 aa6.81□□□□□ -1.32
LDB2-201ENST00000304523 VPS13CQ709C8 3753 aa6.81□□□□□ -1.32
LDB2-201ENST00000304523 IGHV3-38A0A0C4DH36 116 aa6.8□□□□□ -1.32
LDB2-201ENST00000304523 PRM2P04554 102 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms