RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 LOC389332A0A1B0GUA5 103 aa6.48□□□□□ -1.37
RFX3-201ENST00000302303 I3L3M4 83 aa6.48□□□□□ -1.37
RFX3-201ENST00000302303 VCYO14598 125 aa6.48□□□□□ -1.37
RFX3-201ENST00000302303 ESDP10768 282 aa6.48□□□□□ -1.37
RFX3-201ENST00000302303 IFI27P40305 119 aaPredicted RBP6.48□□□□□ -1.37
RFX3-201ENST00000302303 LINC00310P59036 64 aa6.48□□□□□ -1.37
RFX3-201ENST00000302303 KMT2AQ03164 3969 aa6.47□□□□□ -1.37
RFX3-201ENST00000302303 TCAPO15273 167 aa6.47□□□□□ -1.37
RFX3-201ENST00000302303 PMCHP20382 165 aa6.47□□□□□ -1.37
RFX3-201ENST00000302303 LELP1Q5T871 98 aa6.47□□□□□ -1.37
RFX3-201ENST00000302303 WFDC10BQ8IUB3 73 aa6.47□□□□□ -1.37
RFX3-201ENST00000302303 Q8N3U1 123 aa6.47□□□□□ -1.37
RFX3-201ENST00000302303 Q8N8P6 123 aa6.47□□□□□ -1.37
RFX3-201ENST00000302303 UPK3BQ9BT76 320 aa6.47□□□□□ -1.37
RFX3-201ENST00000302303 MRPS16Q9Y3D3 137 aaKnown RBP6.47□□□□□ -1.37
RFX3-201ENST00000302303 DNAH6Q9C0G6 4158 aa6.46□□□□□ -1.37
RFX3-201ENST00000302303 HIST1H2BKO60814 126 aa6.46□□□□□ -1.37
RFX3-201ENST00000302303 HIST1H2BJP06899 126 aa6.46□□□□□ -1.37
RFX3-201ENST00000302303 HIST1H2BOP23527 126 aa6.46□□□□□ -1.37
RFX3-201ENST00000302303 HIST1H2BBP33778 126 aa6.46□□□□□ -1.37
RFX3-201ENST00000302303 HIST1H2BDP58876 126 aa6.46□□□□□ -1.37
RFX3-201ENST00000302303 HIST1H2BCP62807 126 aa6.46□□□□□ -1.37
RFX3-201ENST00000302303 HIST2H2BEQ16778 126 aa6.46□□□□□ -1.37
RFX3-201ENST00000302303 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.46□□□□□ -1.37
RFX3-201ENST00000302303 HIST1H2BHQ93079 126 aa6.46□□□□□ -1.37
RFX3-201ENST00000302303 FAM104AQ969W3 186 aa6.46□□□□□ -1.37
RFX3-201ENST00000302303 HIST1H2BNQ99877 126 aa6.46□□□□□ -1.37
RFX3-201ENST00000302303 HIST1H2BMQ99879 126 aa6.46□□□□□ -1.37
RFX3-201ENST00000302303 MAP1LC3AQ9H492 121 aa6.46□□□□□ -1.37
RFX3-201ENST00000302303 KMT2CQ8NEZ4 4911 aaKnown RBP6.46□□□□□ -1.38
RFX3-201ENST00000302303 HYDINQ4G0P3 5121 aa6.46□□□□□ -1.38
RFX3-201ENST00000302303 NUPR1O60356 82 aa6.45□□□□□ -1.38
RFX3-201ENST00000302303 Q0VG73 95 aa6.45□□□□□ -1.38
RFX3-201ENST00000302303 COTL1Q14019 142 aa6.45□□□□□ -1.38
RFX3-201ENST00000302303 LGALS9CQ6DKI2 356 aa6.45□□□□□ -1.38
RFX3-201ENST00000302303 NIT1Q86X76 327 aa6.45□□□□□ -1.38
RFX3-201ENST00000302303 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.45□□□□□ -1.38
RFX3-201ENST00000302303 A0A096LNJ9 63 aa6.45□□□□□ -1.38
RFX3-201ENST00000302303 CCL18P55774 89 aa6.45□□□□□ -1.38
RFX3-201ENST00000302303 LINC00476Q8WZB0 136 aa6.45□□□□□ -1.38
RFX3-201ENST00000302303 NXT2Q9NPJ8 142 aaKnown RBP6.45□□□□□ -1.38
RFX3-201ENST00000302303 IGHV1-24A0A0C4DH33 117 aa6.44□□□□□ -1.38
RFX3-201ENST00000302303 LINC00614P0C842 121 aa6.44□□□□□ -1.38
RFX3-201ENST00000302303 TMEM97Q5BJF2 176 aa6.44□□□□□ -1.38
RFX3-201ENST00000302303 C20orf203Q8NBC4 194 aa6.44□□□□□ -1.38
RFX3-201ENST00000302303 KIR2DL4Q99706 377 aa6.44□□□□□ -1.38
RFX3-201ENST00000302303 KRTAP1-5Q9BYS1 174 aa6.44□□□□□ -1.38
RFX3-201ENST00000302303 DNAH2Q9P225 4427 aa6.43□□□□□ -1.38
RFX3-201ENST00000302303 TRBV25-1A0A075B6N4 114 aa6.43□□□□□ -1.38
RFX3-201ENST00000302303 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.43□□□□□ -1.38
RFX3-201ENST00000302303 IGKV2-29A2NJV5 120 aaPredicted RBP6.43□□□□□ -1.38
RFX3-201ENST00000302303 DNAH10OSP0CZ25 163 aa6.43□□□□□ -1.38
RFX3-201ENST00000302303 AMTP48728 403 aa6.43□□□□□ -1.38
RFX3-201ENST00000302303 RPL39P62891 51 aaKnown RBP6.43□□□□□ -1.38
RFX3-201ENST00000302303 PRSS3P2Q8NHM4 247 aa6.43□□□□□ -1.38
RFX3-201ENST00000302303 Q9H8V8 135 aa6.43□□□□□ -1.38
RFX3-201ENST00000302303 IGLV4-60A0A075B6I1 120 aa6.42□□□□□ -1.38
RFX3-201ENST00000302303 K7EMI3 77 aa6.42□□□□□ -1.38
RFX3-201ENST00000302303 GAGE6Q13070 117 aa6.42□□□□□ -1.38
RFX3-201ENST00000302303 LAGE3Q14657 143 aa6.42□□□□□ -1.38
RFX3-201ENST00000302303 MPV17L2Q567V2 206 aa6.42□□□□□ -1.38
RFX3-201ENST00000302303 TMEM243Q9BU79 118 aa6.42□□□□□ -1.38
RFX3-201ENST00000302303 SIVA1O15304 175 aa6.41□□□□□ -1.38
RFX3-201ENST00000302303 SERF1AO75920 110 aa6.41□□□□□ -1.38
RFX3-201ENST00000302303 FCER1GP30273 86 aa6.41□□□□□ -1.38
RFX3-201ENST00000302303 LINC01556Q5JQF7 62 aa6.41□□□□□ -1.38
RFX3-201ENST00000302303 COA6Q5JTJ3 125 aaKnown RBP6.41□□□□□ -1.38
RFX3-201ENST00000302303 MRPL52Q86TS9 123 aaKnown RBP6.41□□□□□ -1.38
RFX3-201ENST00000302303 Q8N976 141 aa6.41□□□□□ -1.38
RFX3-201ENST00000302303 CHCHD5Q9BSY4 110 aa6.41□□□□□ -1.38
RFX3-201ENST00000302303 UBE2D4Q9Y2X8 147 aa6.41□□□□□ -1.38
RFX3-201ENST00000302303 DNAH10Q8IVF4 4471 aa6.41□□□□□ -1.38
RFX3-201ENST00000302303 TRAV8-6A0A0B4J262 113 aa6.4□□□□□ -1.38
RFX3-201ENST00000302303 A0A1B0GUV1 79 aa6.4□□□□□ -1.38
RFX3-201ENST00000302303 IGIPA6NJ69 53 aa6.4□□□□□ -1.38
RFX3-201ENST00000302303 C1orf196B1AJZ1 125 aa6.4□□□□□ -1.38
RFX3-201ENST00000302303 H7C423 109 aa6.4□□□□□ -1.38
RFX3-201ENST00000302303 EIF4EBP3O60516 100 aaPredicted RBP6.4□□□□□ -1.38
RFX3-201ENST00000302303 RBX1P62877 108 aa6.4□□□□□ -1.38
RFX3-201ENST00000302303 PMCHL1Q16048 86 aa6.4□□□□□ -1.38
RFX3-201ENST00000302303 AP5S1Q9NUS5 200 aa6.4□□□□□ -1.38
RFX3-201ENST00000302303 LCE6AA0A183 80 aa6.4□□□□□ -1.39
RFX3-201ENST00000302303 LY6G6CO95867 125 aa6.4□□□□□ -1.39
RFX3-201ENST00000302303 FGF6P10767 208 aa6.4□□□□□ -1.39
RFX3-201ENST00000302303 ORMDL2Q53FV1 153 aa6.4□□□□□ -1.39
RFX3-201ENST00000302303 C2orf66Q6UXQ4 117 aa6.4□□□□□ -1.39
RFX3-201ENST00000302303 Q6ZR54 194 aa6.4□□□□□ -1.39
RFX3-201ENST00000302303 FA2HQ7L5A8 372 aa6.4□□□□□ -1.39
RFX3-201ENST00000302303 TOMM6Q96B49 74 aa6.4□□□□□ -1.39
RFX3-201ENST00000302303 CHCHD1Q96BP2 118 aaKnown RBP6.4□□□□□ -1.39
RFX3-201ENST00000302303 OPRPNQ99935 248 aaPredicted RBP6.4□□□□□ -1.39
RFX3-201ENST00000302303 CSDC2Q9Y534 153 aaKnown RBP6.4□□□□□ -1.39
RFX3-201ENST00000302303 RYR2Q92736 4967 aa6.39□□□□□ -1.39
RFX3-201ENST00000302303 IGHV3-30P01768 117 aa6.39□□□□□ -1.39
RFX3-201ENST00000302303 IGHV3-33P01772 117 aa6.39□□□□□ -1.39
RFX3-201ENST00000302303 IGHV3-30-3P0DP02 117 aa6.39□□□□□ -1.39
RFX3-201ENST00000302303 IGHV3-30-5P0DP03 117 aa6.39□□□□□ -1.39
RFX3-201ENST00000302303 PDZD11Q5EBL8 140 aa6.39□□□□□ -1.39
RFX3-201ENST00000302303 RNASEKQ6P5S7 137 aaKnown RBP6.39□□□□□ -1.39
RFX3-201ENST00000302303 BAGE3Q86Y29 109 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms