RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 ZFAND3Q9H8U3 227 aa10.71□□□□□ -0.7
CDT1-201ENST00000301019 H3BT86 120 aa10.7□□□□□ -0.7
CDT1-201ENST00000301019 COX7CP15954 63 aa10.7□□□□□ -0.7
CDT1-201ENST00000301019 CCDC140Q96MF4 163 aa10.7□□□□□ -0.7
CDT1-201ENST00000301019 MBD3L4A6NDZ8 208 aaPredicted RBP10.69□□□□□ -0.7
CDT1-201ENST00000301019 MBD3L3A6NE82 208 aaPredicted RBP10.69□□□□□ -0.7
CDT1-201ENST00000301019 MBD3L5A6NJ08 208 aaPredicted RBP10.69□□□□□ -0.7
CDT1-201ENST00000301019 BAALC-AS2P0C853 105 aa10.69□□□□□ -0.7
CDT1-201ENST00000301019 SYNJ2BPP57105 145 aa10.69□□□□□ -0.7
CDT1-201ENST00000301019 MBD3L2Q8NHZ7 208 aaPredicted RBP10.69□□□□□ -0.7
CDT1-201ENST00000301019 IGHV7-81A0A0B4J1V7 117 aa10.69□□□□□ -0.7
CDT1-201ENST00000301019 TIRAPP58753 221 aa10.69□□□□□ -0.7
CDT1-201ENST00000301019 OVOL1O14753 267 aa10.69□□□□□ -0.7
CDT1-201ENST00000301019 POLR2KP53803 58 aaKnown RBP10.69□□□□□ -0.7
CDT1-201ENST00000301019 CACNA1AO00555 2505 aa10.68□□□□□ -0.7
CDT1-201ENST00000301019 TINCRA0A1B0GVN0 87 aa10.68□□□□□ -0.7
CDT1-201ENST00000301019 E7EQL1 145 aa10.68□□□□□ -0.7
CDT1-201ENST00000301019 PRB1P04280 392 aa10.68□□□□□ -0.7
CDT1-201ENST00000301019 FAM19A4Q96LR4 140 aa10.68□□□□□ -0.7
CDT1-201ENST00000301019 PEMTQ9UBM1 199 aa10.68□□□□□ -0.7
CDT1-201ENST00000301019 C9orf129Q5T035 196 aaKnown RBP10.67□□□□□ -0.7
CDT1-201ENST00000301019 C14orf132Q9NPU4 83 aa10.67□□□□□ -0.7
CDT1-201ENST00000301019 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.67□□□□□ -0.7
CDT1-201ENST00000301019 TRBV7-1A0A0A6YYK4 115 aa10.67□□□□□ -0.7
CDT1-201ENST00000301019 IGKV2-29A2NJV5 120 aaPredicted RBP10.67□□□□□ -0.7
CDT1-201ENST00000301019 TMEM141Q96I45 108 aa10.67□□□□□ -0.7
CDT1-201ENST00000301019 LITAFQ99732 161 aa10.67□□□□□ -0.7
CDT1-201ENST00000301019 IGHV4-4A0A075B6R2 117 aa10.67□□□□□ -0.7
CDT1-201ENST00000301019 LINC00315P59091 139 aa10.67□□□□□ -0.7
CDT1-201ENST00000301019 TMEM61Q8N0U2 210 aa10.67□□□□□ -0.7
CDT1-201ENST00000301019 C1orf43Q9BWL3 253 aa10.67□□□□□ -0.7
CDT1-201ENST00000301019 IGLV4-3A0A075B6K6 122 aa10.66□□□□□ -0.7
CDT1-201ENST00000301019 LINC00643Q86TS7 51 aa10.66□□□□□ -0.7
CDT1-201ENST00000301019 DPH3Q96FX2 82 aa10.66□□□□□ -0.7
CDT1-201ENST00000301019 LRRC75A-AS1Q8N1F1 130 aa10.65□□□□□ -0.7
CDT1-201ENST00000301019 LINC01560Q8TB33 94 aa10.65□□□□□ -0.7
CDT1-201ENST00000301019 TIMM17AQ99595 171 aa10.65□□□□□ -0.7
CDT1-201ENST00000301019 C8orf31Q8N9H6 132 aa10.65□□□□□ -0.7
CDT1-201ENST00000301019 FAM218AQ96MZ4 157 aa10.65□□□□□ -0.7
CDT1-201ENST00000301019 HRNRQ86YZ3 2850 aaPredicted RBP10.64□□□□□ -0.71
CDT1-201ENST00000301019 IGHV1-69DA0A0B4J2H0 117 aa10.64□□□□□ -0.71
CDT1-201ENST00000301019 LY6LH3BQJ8 138 aa10.64□□□□□ -0.71
CDT1-201ENST00000301019 HILS1P60008 231 aa10.64□□□□□ -0.71
CDT1-201ENST00000301019 JMJD1CQ15652 2540 aa10.64□□□□□ -0.71
CDT1-201ENST00000301019 ATP5G1P05496 136 aa10.63□□□□□ -0.71
CDT1-201ENST00000301019 PIK3CD-AS1Q5SR53 167 aa10.63□□□□□ -0.71
CDT1-201ENST00000301019 FAM223AQ8IWN6 122 aa10.63□□□□□ -0.71
CDT1-201ENST00000301019 C2orf48Q96LS8 159 aa10.63□□□□□ -0.71
CDT1-201ENST00000301019 CITED2Q99967 270 aaPredicted RBP10.63□□□□□ -0.71
CDT1-201ENST00000301019 MYO9AB2RTY4 2548 aa10.63□□□□□ -0.71
CDT1-201ENST00000301019 RNASE1P07998 156 aaKnown RBP10.63□□□□□ -0.71
CDT1-201ENST00000301019 MIAQ16674 131 aa10.62□□□□□ -0.71
CDT1-201ENST00000301019 SLPIP03973 132 aa10.62□□□□□ -0.71
CDT1-201ENST00000301019 PRORYQ9H606 182 aa10.62□□□□□ -0.71
CDT1-201ENST00000301019 KIF25-AS1Q9Y6Z4 181 aa10.62□□□□□ -0.71
CDT1-201ENST00000301019 FAM240AA0A1B0GVK7 77 aa10.62□□□□□ -0.71
CDT1-201ENST00000301019 WFDC11Q8NEX6 87 aa10.62□□□□□ -0.71
CDT1-201ENST00000301019 C20orf203Q8NBC4 194 aa10.61□□□□□ -0.71
CDT1-201ENST00000301019 CDKN2A-AS1Q9UH64 79 aa10.61□□□□□ -0.71
CDT1-201ENST00000301019 IGHV3-16A0A0C4DH30 117 aa10.61□□□□□ -0.71
CDT1-201ENST00000301019 DNAL4O96015 105 aa10.61□□□□□ -0.71
CDT1-201ENST00000301019 Q9H8V8 135 aa10.61□□□□□ -0.71
CDT1-201ENST00000301019 A0A0U1RQV1 116 aa10.6□□□□□ -0.71
CDT1-201ENST00000301019 DCANP1Q8TF63 244 aa10.6□□□□□ -0.71
CDT1-201ENST00000301019 SPANXA1Q9NS26 97 aa10.6□□□□□ -0.71
CDT1-201ENST00000301019 PTPN13Q12923 2485 aa10.6□□□□□ -0.71
CDT1-201ENST00000301019 TRAV23DV6A0A075B6W5 121 aa10.6□□□□□ -0.71
CDT1-201ENST00000301019 SPINK13Q1W4C9 94 aa10.6□□□□□ -0.71
CDT1-201ENST00000301019 IGKV3OR2-268A0A0C4DH90 116 aa10.6□□□□□ -0.71
CDT1-201ENST00000301019 PPP1R17O96001 155 aa10.6□□□□□ -0.71
CDT1-201ENST00000301019 NUP37Q8NFH4 326 aa10.6□□□□□ -0.71
CDT1-201ENST00000301019 KAAG1Q9UBP8 84 aa10.6□□□□□ -0.71
CDT1-201ENST00000301019 LY6DQ14210 128 aa10.59□□□□□ -0.71
CDT1-201ENST00000301019 Q8N9W7 124 aa10.59□□□□□ -0.71
CDT1-201ENST00000301019 NPBQ8NG41 125 aa10.59□□□□□ -0.71
CDT1-201ENST00000301019 ITLN2Q8WWU7 325 aaPredicted RBP10.59□□□□□ -0.71
CDT1-201ENST00000301019 M0QY20 66 aa10.58□□□□□ -0.72
CDT1-201ENST00000301019 GRNP28799 593 aaKnown RBP10.58□□□□□ -0.72
CDT1-201ENST00000301019 IGHV1-58A0A0C4DH39 117 aa10.58□□□□□ -0.72
CDT1-201ENST00000301019 TRBV27A0A0K0K1C4 114 aa10.58□□□□□ -0.72
CDT1-201ENST00000301019 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.58□□□□□ -0.72
CDT1-201ENST00000301019 NCR3O14931 201 aa10.58□□□□□ -0.72
CDT1-201ENST00000301019 PYGO1Q9Y3Y4 419 aa10.58□□□□□ -0.72
CDT1-201ENST00000301019 ITPR1Q14643 2758 aa10.57□□□□□ -0.72
CDT1-201ENST00000301019 C20orf197Q8N268 126 aa10.57□□□□□ -0.72
CDT1-201ENST00000301019 LY6G5BQ8NDX9 201 aa10.57□□□□□ -0.72
CDT1-201ENST00000301019 LINC00846Q9NV44 126 aa10.57□□□□□ -0.72
CDT1-201ENST00000301019 RPL35AP18077 110 aaKnown RBP10.56□□□□□ -0.72
CDT1-201ENST00000301019 FHL2Q14192 279 aa10.56□□□□□ -0.72
CDT1-201ENST00000301019 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.56□□□□□ -0.72
CDT1-201ENST00000301019 VSIG2Q96IQ7 327 aa10.56□□□□□ -0.72
CDT1-201ENST00000301019 RNF5Q99942 180 aa10.56□□□□□ -0.72
CDT1-201ENST00000301019 ATOX1O00244 68 aa10.56□□□□□ -0.72
CDT1-201ENST00000301019 LY6EQ16553 131 aa10.56□□□□□ -0.72
CDT1-201ENST00000301019 SOSTDC1Q6X4U4 206 aa10.56□□□□□ -0.72
CDT1-201ENST00000301019 C9orf139Q6ZV77 190 aa10.56□□□□□ -0.72
CDT1-201ENST00000301019 CRYGAP11844 174 aa10.56□□□□□ -0.72
CDT1-201ENST00000301019 Q5XG85 94 aa10.56□□□□□ -0.72
CDT1-201ENST00000301019 USP17L23D6RBM5 183 aa10.55□□□□□ -0.72
CDT1-201ENST00000301019 FN1P02751 2386 aaKnown RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms