RNA–Protein interactions for RNA: ENST00000297439.3

DEFB1-201, Transcript of defensin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEFB1, Length 478 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEFB1-201ENST00000297439 FLNCQ14315 2725 aa4.78□□□□□ -1.64
DEFB1-201ENST00000297439 A0A0B4J2C4 111 aa4.78□□□□□ -1.64
DEFB1-201ENST00000297439 TMEM238C9JI98 176 aa4.78□□□□□ -1.64
DEFB1-201ENST00000297439 J3QR89 54 aa4.78□□□□□ -1.64
DEFB1-201ENST00000297439 TIMM17BO60830 172 aa4.78□□□□□ -1.64
DEFB1-201ENST00000297439 RNASE1P07998 156 aaKnown RBP4.78□□□□□ -1.64
DEFB1-201ENST00000297439 SMAGPQ0VAQ4 97 aa4.78□□□□□ -1.64
DEFB1-201ENST00000297439 SRSF9Q13242 221 aaKnown RBP eCLIP4.78□□□□□ -1.64
DEFB1-201ENST00000297439 DEFB136Q30KP8 78 aa4.78□□□□□ -1.64
DEFB1-201ENST00000297439 C18orf65Q6ZTR6 163 aa4.78□□□□□ -1.64
DEFB1-201ENST00000297439 NDUFA11Q86Y39 141 aa4.78□□□□□ -1.64
DEFB1-201ENST00000297439 C10orf126Q8N4M7 172 aa4.78□□□□□ -1.64
DEFB1-201ENST00000297439 NAA38Q9BRA0 125 aaKnown RBP4.78□□□□□ -1.64
DEFB1-201ENST00000297439 CHCHD7Q9BUK0 85 aa4.78□□□□□ -1.64
DEFB1-201ENST00000297439 PPDPFQ9H3Y8 114 aa4.78□□□□□ -1.64
DEFB1-201ENST00000297439 UBE2D4Q9Y2X8 147 aa4.78□□□□□ -1.64
DEFB1-201ENST00000297439 CSPG4Q6UVK1 2322 aa4.78□□□□□ -1.64
DEFB1-201ENST00000297439 CREBBPQ92793 2442 aa4.77□□□□□ -1.65
DEFB1-201ENST00000297439 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.77□□□□□ -1.65
DEFB1-201ENST00000297439 IGHV1-58A0A0C4DH39 117 aa4.77□□□□□ -1.65
DEFB1-201ENST00000297439 A0A0J9YXY3 114 aa4.77□□□□□ -1.65
DEFB1-201ENST00000297439 ZNF561-AS1K7EIQ3 104 aa4.77□□□□□ -1.65
DEFB1-201ENST00000297439 NDUFA7O95182 113 aa4.77□□□□□ -1.65
DEFB1-201ENST00000297439 TSPAN13O95857 204 aa4.77□□□□□ -1.65
DEFB1-201ENST00000297439 PCP4P48539 62 aa4.77□□□□□ -1.65
DEFB1-201ENST00000297439 TIRAPP58753 221 aa4.77□□□□□ -1.65
DEFB1-201ENST00000297439 RPL24P83731 157 aaKnown RBP4.77□□□□□ -1.65
DEFB1-201ENST00000297439 KRTAP1-1Q07627 177 aa4.77□□□□□ -1.65
DEFB1-201ENST00000297439 DAZ2Q13117 558 aaKnown RBP4.77□□□□□ -1.65
DEFB1-201ENST00000297439 COTL1Q14019 142 aa4.77□□□□□ -1.65
DEFB1-201ENST00000297439 GAGE13Q4V321 117 aa4.77□□□□□ -1.65
DEFB1-201ENST00000297439 SBSPONQ8IVN8 264 aa4.77□□□□□ -1.65
DEFB1-201ENST00000297439 TMEM263Q8WUH6 116 aaKnown RBP4.77□□□□□ -1.65
DEFB1-201ENST00000297439 LINC01587Q99440 93 aa4.77□□□□□ -1.65
DEFB1-201ENST00000297439 VPS25Q9BRG1 176 aa4.77□□□□□ -1.65
DEFB1-201ENST00000297439 SPANXDQ9BXN6 97 aa4.77□□□□□ -1.65
DEFB1-201ENST00000297439 KRTAP4-2Q9BYR5 136 aa4.77□□□□□ -1.65
DEFB1-201ENST00000297439 MRPL16Q9NX20 251 aaKnown RBP4.77□□□□□ -1.65
DEFB1-201ENST00000297439 SPANXCQ9NY87 97 aa4.77□□□□□ -1.65
DEFB1-201ENST00000297439 TSSC4Q9Y5U2 329 aaPredicted RBP4.77□□□□□ -1.65
DEFB1-201ENST00000297439 SELENOKQ9Y6D0 94 aa4.77□□□□□ -1.65
DEFB1-201ENST00000297439 ANKRD17O75179 2603 aaKnown RBP4.77□□□□□ -1.65
DEFB1-201ENST00000297439 ZNF462Q96JM2 2506 aa4.77□□□□□ -1.65
DEFB1-201ENST00000297439 MYO18BQ8IUG5 2567 aa4.76□□□□□ -1.65
DEFB1-201ENST00000297439 A0A0J9YXV3 536 aa4.76□□□□□ -1.65
DEFB1-201ENST00000297439 H3BMG7 143 aa4.76□□□□□ -1.65
DEFB1-201ENST00000297439 CCL24O00175 119 aa4.76□□□□□ -1.65
DEFB1-201ENST00000297439 SAP30O75446 220 aa4.76□□□□□ -1.65
DEFB1-201ENST00000297439 CFC1BP0CG36 223 aa4.76□□□□□ -1.65
DEFB1-201ENST00000297439 CFC1P0CG37 223 aa4.76□□□□□ -1.65
DEFB1-201ENST00000297439 IGHV3-30-3P0DP02 117 aa4.76□□□□□ -1.65
DEFB1-201ENST00000297439 CD28P10747 220 aa4.76□□□□□ -1.65
DEFB1-201ENST00000297439 ZFAND6Q6FIF0 208 aa4.76□□□□□ -1.65
DEFB1-201ENST00000297439 C1orf158Q8N1D5 194 aa4.76□□□□□ -1.65
DEFB1-201ENST00000297439 PRO1854Q9UHT4 67 aa4.76□□□□□ -1.65
DEFB1-201ENST00000297439 DOPEY2Q9Y3R5 2298 aa4.76□□□□□ -1.65
DEFB1-201ENST00000297439 USP9YO00507 2555 aaPredicted RBP4.75□□□□□ -1.65
DEFB1-201ENST00000297439 TRAV4A0A0B4J268 109 aa4.75□□□□□ -1.65
DEFB1-201ENST00000297439 TEX48A0A1B0GUV7 120 aa4.75□□□□□ -1.65
DEFB1-201ENST00000297439 H7C423 109 aa4.75□□□□□ -1.65
DEFB1-201ENST00000297439 IGLV1-51P01701 117 aa4.75□□□□□ -1.65
DEFB1-201ENST00000297439 IFITM1P13164 125 aa4.75□□□□□ -1.65
DEFB1-201ENST00000297439 EMP1P54849 157 aa4.75□□□□□ -1.65
DEFB1-201ENST00000297439 RNF151Q2KHN1 245 aa4.75□□□□□ -1.65
DEFB1-201ENST00000297439 DAZ4Q86SG3 579 aaKnown RBP4.75□□□□□ -1.65
DEFB1-201ENST00000297439 STHQ8IWL8 128 aa4.75□□□□□ -1.65
DEFB1-201ENST00000297439 VSIG2Q96IQ7 327 aa4.75□□□□□ -1.65
DEFB1-201ENST00000297439 LITAFQ99732 161 aa4.75□□□□□ -1.65
DEFB1-201ENST00000297439 OPRPNQ99935 248 aaPredicted RBP4.75□□□□□ -1.65
DEFB1-201ENST00000297439 C1QTNF4Q9BXJ3 329 aa4.75□□□□□ -1.65
DEFB1-201ENST00000297439 GTSF1LQ9H1H1 148 aa4.75□□□□□ -1.65
DEFB1-201ENST00000297439 CDIP1Q9H305 208 aa4.75□□□□□ -1.65
DEFB1-201ENST00000297439 ESM1Q9NQ30 184 aa4.75□□□□□ -1.65
DEFB1-201ENST00000297439 DAZ3Q9NR90 486 aaKnown RBP4.75□□□□□ -1.65
DEFB1-201ENST00000297439 NAV2Q8IVL1 2488 aa4.75□□□□□ -1.65
DEFB1-201ENST00000297439 FBN2P35556 2912 aa4.75□□□□□ -1.65
DEFB1-201ENST00000297439 PTPN13Q12923 2485 aa4.74□□□□□ -1.65
DEFB1-201ENST00000297439 ASH1LQ9NR48 2969 aaKnown RBP4.74□□□□□ -1.65
DEFB1-201ENST00000297439 LRRK2Q5S007 2527 aa4.74□□□□□ -1.65
DEFB1-201ENST00000297439 IGLV5-39A0A0G2JS06 123 aa4.74□□□□□ -1.65
DEFB1-201ENST00000297439 IGHV3-33P01772 117 aa4.74□□□□□ -1.65
DEFB1-201ENST00000297439 SCGB1A1P11684 91 aa4.74□□□□□ -1.65
DEFB1-201ENST00000297439 HERVK_113P63121 156 aa4.74□□□□□ -1.65
DEFB1-201ENST00000297439 KHDC1LQ5JSQ8 128 aa4.74□□□□□ -1.65
DEFB1-201ENST00000297439 LCE4AQ5TA78 99 aa4.74□□□□□ -1.65
DEFB1-201ENST00000297439 Q6ZSN1 163 aa4.74□□□□□ -1.65
DEFB1-201ENST00000297439 WFDC11Q8NEX6 87 aa4.74□□□□□ -1.65
DEFB1-201ENST00000297439 LINC01006Q8NI28 216 aa4.74□□□□□ -1.65
DEFB1-201ENST00000297439 C16orf74Q96GX8 76 aa4.74□□□□□ -1.65
DEFB1-201ENST00000297439 SPATA25Q9BR10 227 aa4.74□□□□□ -1.65
DEFB1-201ENST00000297439 OVOL2Q9BRP0 275 aa4.74□□□□□ -1.65
DEFB1-201ENST00000297439 YAE1D1Q9NRH1 226 aa4.74□□□□□ -1.65
DEFB1-201ENST00000297439 AGRNO00468 2067 aa4.74□□□□□ -1.65
DEFB1-201ENST00000297439 TRBV6-4A0A1B0GX49 114 aa4.73□□□□□ -1.65
DEFB1-201ENST00000297439 A4D1N5 150 aa4.73□□□□□ -1.65
DEFB1-201ENST00000297439 K7EQD1 137 aa4.73□□□□□ -1.65
DEFB1-201ENST00000297439 NDUFA1O15239 70 aa4.73□□□□□ -1.65
DEFB1-201ENST00000297439 AZU1P20160 251 aa4.73□□□□□ -1.65
DEFB1-201ENST00000297439 PROK1P58294 105 aa4.73□□□□□ -1.65
DEFB1-201ENST00000297439 HILS1P60008 231 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms