RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.11□□□□□ -0.63
SPIDR-201ENST00000297423 IGKV2-29A2NJV5 120 aaPredicted RBP11.11□□□□□ -0.63
SPIDR-201ENST00000297423 IGIPA6NJ69 53 aa11.11□□□□□ -0.63
SPIDR-201ENST00000297423 COX8CQ7Z4L0 72 aa11.11□□□□□ -0.63
SPIDR-201ENST00000297423 GPHB5Q86YW7 130 aa11.11□□□□□ -0.63
SPIDR-201ENST00000297423 FAM110AQ9BQ89 295 aa11.11□□□□□ -0.63
SPIDR-201ENST00000297423 LINC01546A6NGU7 62 aa11.1□□□□□ -0.63
SPIDR-201ENST00000297423 CIRBPQ14011 172 aaKnown RBP11.1□□□□□ -0.63
SPIDR-201ENST00000297423 IGHV1-69DA0A0B4J2H0 117 aa11.1□□□□□ -0.63
SPIDR-201ENST00000297423 TOMM7Q9P0U1 55 aa11.1□□□□□ -0.63
SPIDR-201ENST00000297423 RELNP78509 3460 aa11.1□□□□□ -0.63
SPIDR-201ENST00000297423 TRBV7-1A0A0A6YYK4 115 aa11.1□□□□□ -0.63
SPIDR-201ENST00000297423 MINOS1Q5TGZ0 78 aa11.09□□□□□ -0.63
SPIDR-201ENST00000297423 MINOS1-NBL1R4GNA1 71 aa11.09□□□□□ -0.63
SPIDR-201ENST00000297423 I3L3M4 83 aa11.09□□□□□ -0.63
SPIDR-201ENST00000297423 PRM2P04554 102 aa11.09□□□□□ -0.63
SPIDR-201ENST00000297423 PSMG3-AS1Q96PY0 264 aa11.09□□□□□ -0.63
SPIDR-201ENST00000297423 USP24Q9UPU5 2620 aa11.09□□□□□ -0.63
SPIDR-201ENST00000297423 BSNQ9UPA5 3926 aa11.09□□□□□ -0.63
SPIDR-201ENST00000297423 LMO4P61968 165 aa11.09□□□□□ -0.63
SPIDR-201ENST00000297423 MUC4Q99102 2169 aa11.08□□□□□ -0.64
SPIDR-201ENST00000297423 IGKV3D-7A0A0C4DH55 119 aa11.08□□□□□ -0.64
SPIDR-201ENST00000297423 ADAMTSL4-AS1Q5T5F5 129 aa11.08□□□□□ -0.64
SPIDR-201ENST00000297423 NRGNQ92686 78 aa11.08□□□□□ -0.64
SPIDR-201ENST00000297423 TIMM17AQ99595 171 aa11.08□□□□□ -0.64
SPIDR-201ENST00000297423 TMEM223A0PJW6 202 aa11.08□□□□□ -0.64
SPIDR-201ENST00000297423 EDN2P20800 178 aa11.08□□□□□ -0.64
SPIDR-201ENST00000297423 PROK1P58294 105 aa11.08□□□□□ -0.64
SPIDR-201ENST00000297423 IGSF10Q6WRI0 2623 aa11.08□□□□□ -0.64
SPIDR-201ENST00000297423 Q9HAA7 133 aa11.07□□□□□ -0.64
SPIDR-201ENST00000297423 ITPR1Q14643 2758 aa11.07□□□□□ -0.64
SPIDR-201ENST00000297423 A0A0B4J2C4 111 aa11.07□□□□□ -0.64
SPIDR-201ENST00000297423 NPFFO15130 113 aa11.07□□□□□ -0.64
SPIDR-201ENST00000297423 NXPH4O95158 308 aa11.07□□□□□ -0.64
SPIDR-201ENST00000297423 RHOHQ15669 191 aa11.07□□□□□ -0.64
SPIDR-201ENST00000297423 MAPK1IP1LQ8NDC0 245 aa11.07□□□□□ -0.64
SPIDR-201ENST00000297423 IGHV4-61A0A0C4DH41 118 aa11.07□□□□□ -0.64
SPIDR-201ENST00000297423 C10orf105Q8TEF2 133 aa11.06□□□□□ -0.64
SPIDR-201ENST00000297423 FASNP49327 2511 aaKnown RBP11.06□□□□□ -0.64
SPIDR-201ENST00000297423 CENPVL3A0A0U1RRI6 287 aa11.06□□□□□ -0.64
SPIDR-201ENST00000297423 DNAL4O96015 105 aa11.06□□□□□ -0.64
SPIDR-201ENST00000297423 OR13C6PQ8NH95 151 aa11.06□□□□□ -0.64
SPIDR-201ENST00000297423 SIRPDQ9H106 197 aa11.06□□□□□ -0.64
SPIDR-201ENST00000297423 VPREB3Q9UKI3 123 aa11.06□□□□□ -0.64
SPIDR-201ENST00000297423 POLR2KP53803 58 aaKnown RBP11.05□□□□□ -0.64
SPIDR-201ENST00000297423 DSCR9P59020 149 aa11.05□□□□□ -0.64
SPIDR-201ENST00000297423 HIST1H4AP62805 103 aaKnown RBP11.05□□□□□ -0.64
SPIDR-201ENST00000297423 HERVK_113P63121 156 aa11.05□□□□□ -0.64
SPIDR-201ENST00000297423 IGHV4-4A0A075B6R2 117 aa11.05□□□□□ -0.64
SPIDR-201ENST00000297423 IGHV4-30-2A0A087WSY4 118 aa11.05□□□□□ -0.64
SPIDR-201ENST00000297423 BAALC-AS2P0C853 105 aa11.05□□□□□ -0.64
SPIDR-201ENST00000297423 EIF4EBP3O60516 100 aaPredicted RBP11.04□□□□□ -0.64
SPIDR-201ENST00000297423 NSUN5P1Q3KNT7 163 aa11.04□□□□□ -0.64
SPIDR-201ENST00000297423 ODF3BA8MYP8 253 aa11.04□□□□□ -0.64
SPIDR-201ENST00000297423 C20orf203Q8NBC4 194 aa11.04□□□□□ -0.64
SPIDR-201ENST00000297423 SBSPONQ8IVN8 264 aa11.03□□□□□ -0.64
SPIDR-201ENST00000297423 IGLV4-3A0A075B6K6 122 aa11.03□□□□□ -0.64
SPIDR-201ENST00000297423 hADV29S1A0JD25 119 aa11.03□□□□□ -0.64
SPIDR-201ENST00000297423 PRIMA1Q86XR5 153 aa11.03□□□□□ -0.64
SPIDR-201ENST00000297423 Q9H8V8 135 aa11.03□□□□□ -0.64
SPIDR-201ENST00000297423 CUBNO60494 3623 aa11.03□□□□□ -0.64
SPIDR-201ENST00000297423 TRBV30A0A0K0K1B3 111 aa11.02□□□□□ -0.64
SPIDR-201ENST00000297423 H3BT86 120 aa11.02□□□□□ -0.65
SPIDR-201ENST00000297423 MRPL53Q96EL3 112 aaKnown RBP11.02□□□□□ -0.65
SPIDR-201ENST00000297423 TINCRA0A1B0GVN0 87 aa11.02□□□□□ -0.65
SPIDR-201ENST00000297423 SNRPD3P62318 126 aaKnown RBP11.02□□□□□ -0.65
SPIDR-201ENST00000297423 SDIM1Q6ZPB5 146 aa11.02□□□□□ -0.65
SPIDR-201ENST00000297423 B4DSR2 109 aa11.01□□□□□ -0.65
SPIDR-201ENST00000297423 IGHV3-53P01767 116 aa11.01□□□□□ -0.65
SPIDR-201ENST00000297423 MSMBP08118 114 aa11.01□□□□□ -0.65
SPIDR-201ENST00000297423 DAZ2Q13117 558 aaKnown RBP11.01□□□□□ -0.65
SPIDR-201ENST00000297423 DAZ4Q86SG3 579 aaKnown RBP11.01□□□□□ -0.65
SPIDR-201ENST00000297423 TMEM126AQ9H061 195 aa11.01□□□□□ -0.65
SPIDR-201ENST00000297423 DAZ1Q9NQZ3 744 aaKnown RBP11.01□□□□□ -0.65
SPIDR-201ENST00000297423 DAZ3Q9NR90 486 aaKnown RBP11.01□□□□□ -0.65
SPIDR-201ENST00000297423 C11orf68Q9H3H3 251 aaKnown RBP11.01□□□□□ -0.65
SPIDR-201ENST00000297423 LENEPQ9Y5L5 61 aa11.01□□□□□ -0.65
SPIDR-201ENST00000297423 BLCAPP62952 87 aa11.01□□□□□ -0.65
SPIDR-201ENST00000297423 H3BUX3 64 aa11□□□□□ -0.65
SPIDR-201ENST00000297423 POM121L12Q8N7R1 296 aa11□□□□□ -0.65
SPIDR-201ENST00000297423 RNF223E7ERA6 249 aa11□□□□□ -0.65
SPIDR-201ENST00000297423 IGHV1OR15-1A0A075B7D0 117 aa10.99□□□□□ -0.65
SPIDR-201ENST00000297423 M0QY20 66 aa10.99□□□□□ -0.65
SPIDR-201ENST00000297423 IGHV1-69P01742 117 aa10.99□□□□□ -0.65
SPIDR-201ENST00000297423 CDKN2A-AS1Q9UH64 79 aa10.99□□□□□ -0.65
SPIDR-201ENST00000297423 HIST2H2BDQ6DRA6 164 aa10.98□□□□□ -0.65
SPIDR-201ENST00000297423 CFAP46Q8IYW2 2715 aa10.98□□□□□ -0.65
SPIDR-201ENST00000297423 A0A1B0GX51 115 aa10.98□□□□□ -0.65
SPIDR-201ENST00000297423 BRI3O95415 125 aa10.98□□□□□ -0.65
SPIDR-201ENST00000297423 MOB4Q9Y3A3 225 aa10.98□□□□□ -0.65
SPIDR-201ENST00000297423 F8P00451 2351 aa10.98□□□□□ -0.65
SPIDR-201ENST00000297423 IGHV1-58A0A0C4DH39 117 aa10.98□□□□□ -0.65
SPIDR-201ENST00000297423 NDUFA7O95182 113 aa10.98□□□□□ -0.65
SPIDR-201ENST00000297423 MIAQ16674 131 aa10.98□□□□□ -0.65
SPIDR-201ENST00000297423 DCHS2Q6V1P9 2916 aa10.98□□□□□ -0.65
SPIDR-201ENST00000297423 A0A1W2PRX2 142 aa10.97□□□□□ -0.65
SPIDR-201ENST00000297423 Q6Q795 121 aa10.97□□□□□ -0.65
SPIDR-201ENST00000297423 AMELXQ99217 191 aa10.97□□□□□ -0.65
SPIDR-201ENST00000297423 TRBV27A0A0K0K1C4 114 aa10.97□□□□□ -0.65
SPIDR-201ENST00000297423 LST1O00453 97 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms