RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 TIMM17AQ99595 171 aa8.53□□□□□ -1.04
RHO-201ENST00000296271 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.52□□□□□ -1.05
RHO-201ENST00000296271 IGKV2-29A2NJV5 120 aaPredicted RBP8.52□□□□□ -1.05
RHO-201ENST00000296271 J3QKU1 62 aa8.52□□□□□ -1.05
RHO-201ENST00000296271 RNF151Q2KHN1 245 aa8.52□□□□□ -1.05
RHO-201ENST00000296271 IGLV4-3A0A075B6K6 122 aa8.52□□□□□ -1.05
RHO-201ENST00000296271 SAP30O75446 220 aa8.52□□□□□ -1.05
RHO-201ENST00000296271 C12orf74Q32Q52 190 aa8.52□□□□□ -1.05
RHO-201ENST00000296271 SCGB1D4Q6XE38 83 aa8.52□□□□□ -1.05
RHO-201ENST00000296271 MTURNQ8N3F0 131 aa8.52□□□□□ -1.05
RHO-201ENST00000296271 SPCS1Q9Y6A9 102 aa8.52□□□□□ -1.05
RHO-201ENST00000296271 K7EP34 96 aa8.51□□□□□ -1.05
RHO-201ENST00000296271 RBX1P62877 108 aa8.51□□□□□ -1.05
RHO-201ENST00000296271 ZNF415Q09FC8 603 aa8.51□□□□□ -1.05
RHO-201ENST00000296271 SCGB2A2Q13296 93 aa8.51□□□□□ -1.05
RHO-201ENST00000296271 STHQ8IWL8 128 aa8.51□□□□□ -1.05
RHO-201ENST00000296271 ADARB2-AS1A8MUL3 147 aa8.51□□□□□ -1.05
RHO-201ENST00000296271 TMEM141Q96I45 108 aa8.51□□□□□ -1.05
RHO-201ENST00000296271 A8MZ25 164 aa8.5□□□□□ -1.05
RHO-201ENST00000296271 INSP01308 110 aa8.5□□□□□ -1.05
RHO-201ENST00000296271 RPL35AP18077 110 aaKnown RBP8.5□□□□□ -1.05
RHO-201ENST00000296271 TNFRSF18Q9Y5U5 241 aa8.5□□□□□ -1.05
RHO-201ENST00000296271 ZNF479Q96JC4 524 aa8.5□□□□□ -1.05
RHO-201ENST00000296271 TRAV2A0A0B4J234 112 aa8.49□□□□□ -1.05
RHO-201ENST00000296271 IGLL5B9A064 214 aa8.49□□□□□ -1.05
RHO-201ENST00000296271 GIG44P09565 113 aaPredicted RBP8.49□□□□□ -1.05
RHO-201ENST00000296271 RHOHQ15669 191 aa8.49□□□□□ -1.05
RHO-201ENST00000296271 Q6ZTI0 123 aa8.49□□□□□ -1.05
RHO-201ENST00000296271 SPATA3Q8NHX4 192 aa8.49□□□□□ -1.05
RHO-201ENST00000296271 AMELXQ99217 191 aa8.49□□□□□ -1.05
RHO-201ENST00000296271 TRRAPQ9Y4A5 3859 aa8.49□□□□□ -1.05
RHO-201ENST00000296271 TRGV1A0A0A0MS02 117 aa8.49□□□□□ -1.05
RHO-201ENST00000296271 KRTAP10-3P60369 221 aa8.49□□□□□ -1.05
RHO-201ENST00000296271 LINC00467Q9BRT7 94 aa8.49□□□□□ -1.05
RHO-201ENST00000296271 CHCHD7Q9BUK0 85 aa8.49□□□□□ -1.05
RHO-201ENST00000296271 NSD1Q96L73 2696 aaPredicted RBP8.49□□□□□ -1.05
RHO-201ENST00000296271 TRAV8-3A0A0A6YYJ7 113 aa8.48□□□□□ -1.05
RHO-201ENST00000296271 A8MWV9 139 aa8.48□□□□□ -1.05
RHO-201ENST00000296271 ZNF22P17026 224 aaPredicted RBP8.48□□□□□ -1.05
RHO-201ENST00000296271 SRSF9Q13242 221 aaKnown RBP eCLIP8.48□□□□□ -1.05
RHO-201ENST00000296271 SPXQ9BT56 116 aa8.48□□□□□ -1.05
RHO-201ENST00000296271 TSSC4Q9Y5U2 329 aaPredicted RBP8.48□□□□□ -1.05
RHO-201ENST00000296271 HIVEP1P15822 2718 aa8.48□□□□□ -1.05
RHO-201ENST00000296271 ATRQ13535 2644 aa8.48□□□□□ -1.05
RHO-201ENST00000296271 A0A0J9YY99 117 aa8.48□□□□□ -1.05
RHO-201ENST00000296271 FABP2P12104 132 aa8.48□□□□□ -1.05
RHO-201ENST00000296271 OCIAD2Q56VL3 154 aa8.48□□□□□ -1.05
RHO-201ENST00000296271 VCX2Q9H322 139 aa8.48□□□□□ -1.05
RHO-201ENST00000296271 RNASE1P07998 156 aaKnown RBP8.47□□□□□ -1.05
RHO-201ENST00000296271 J3QQQ9 107 aa8.47□□□□□ -1.05
RHO-201ENST00000296271 TMEM223A0PJW6 202 aa8.46□□□□□ -1.05
RHO-201ENST00000296271 NDUFA7O95182 113 aa8.46□□□□□ -1.05
RHO-201ENST00000296271 APOMO95445 188 aa8.46□□□□□ -1.05
RHO-201ENST00000296271 Q6ZUT4 128 aa8.46□□□□□ -1.05
RHO-201ENST00000296271 GTF2H5Q6ZYL4 71 aa8.46□□□□□ -1.05
RHO-201ENST00000296271 RHODO00212 210 aa8.46□□□□□ -1.06
RHO-201ENST00000296271 NOP10Q9NPE3 64 aaKnown RBP8.46□□□□□ -1.06
RHO-201ENST00000296271 H3BMG7 143 aa8.45□□□□□ -1.06
RHO-201ENST00000296271 BEAN1Q3B7T3 259 aa8.45□□□□□ -1.06
RHO-201ENST00000296271 NFE4Q86UQ8 179 aa8.45□□□□□ -1.06
RHO-201ENST00000296271 LINC01549A6NIU2 74 aa8.45□□□□□ -1.06
RHO-201ENST00000296271 RS1O15537 224 aa8.45□□□□□ -1.06
RHO-201ENST00000296271 LINC00694P0DN24 101 aa8.45□□□□□ -1.06
RHO-201ENST00000296271 HERVK_113P61574 105 aa8.45□□□□□ -1.06
RHO-201ENST00000296271 TAL2Q16559 108 aa8.45□□□□□ -1.06
RHO-201ENST00000296271 C19orf73Q9NVV2 129 aa8.45□□□□□ -1.06
RHO-201ENST00000296271 PGPEP1Q9NXJ5 209 aa8.44□□□□□ -1.06
RHO-201ENST00000296271 UBE2D4Q9Y2X8 147 aa8.44□□□□□ -1.06
RHO-201ENST00000296271 LOC100131303A0A0U1RQF7 123 aa8.44□□□□□ -1.06
RHO-201ENST00000296271 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.44□□□□□ -1.06
RHO-201ENST00000296271 TRAV25A0A0B4J276 109 aa8.43□□□□□ -1.06
RHO-201ENST00000296271 EIF4EBP3O60516 100 aaPredicted RBP8.43□□□□□ -1.06
RHO-201ENST00000296271 LGALS3P17931 250 aaKnown RBP8.43□□□□□ -1.06
RHO-201ENST00000296271 HILS1P60008 231 aa8.43□□□□□ -1.06
RHO-201ENST00000296271 PAPPA-AS1Q5QFB9 102 aa8.43□□□□□ -1.06
RHO-201ENST00000296271 C10orf126Q8N4M7 172 aa8.43□□□□□ -1.06
RHO-201ENST00000296271 C16orf95Q9H693 158 aa8.43□□□□□ -1.06
RHO-201ENST00000296271 SPINK8P0C7L1 97 aa8.43□□□□□ -1.06
RHO-201ENST00000296271 WFDC2Q14508 124 aa8.43□□□□□ -1.06
RHO-201ENST00000296271 RRN3P1Q2M238 152 aa8.43□□□□□ -1.06
RHO-201ENST00000296271 EDA2RQ9HAV5 297 aa8.43□□□□□ -1.06
RHO-201ENST00000296271 PLAC8L1A1L4L8 177 aa8.42□□□□□ -1.06
RHO-201ENST00000296271 GAGE7O76087 117 aa8.42□□□□□ -1.06
RHO-201ENST00000296271 LY6G6DO95868 133 aa8.42□□□□□ -1.06
RHO-201ENST00000296271 IGLV1-51P01701 117 aa8.42□□□□□ -1.06
RHO-201ENST00000296271 IGHV3-30P01768 117 aa8.42□□□□□ -1.06
RHO-201ENST00000296271 GAGE12FP0CL80 117 aa8.42□□□□□ -1.06
RHO-201ENST00000296271 GAGE12GP0CL81 117 aa8.42□□□□□ -1.06
RHO-201ENST00000296271 GAGE12IP0CL82 117 aa8.42□□□□□ -1.06
RHO-201ENST00000296271 IGHV3-30-5P0DP03 117 aa8.42□□□□□ -1.06
RHO-201ENST00000296271 IL17DQ8TAD2 202 aa8.42□□□□□ -1.06
RHO-201ENST00000296271 A0A1B0GWB2 263 aa8.42□□□□□ -1.06
RHO-201ENST00000296271 IGHV3-30-3P0DP02 117 aa8.42□□□□□ -1.06
RHO-201ENST00000296271 NTM-AS1Q6ZSK4 140 aa8.42□□□□□ -1.06
RHO-201ENST00000296271 SLC25A29Q8N8R3 303 aa8.42□□□□□ -1.06
RHO-201ENST00000296271 OR5A1Q8NGJ0 315 aa8.42□□□□□ -1.06
RHO-201ENST00000296271 GAGE12JA6NER3 117 aa8.41□□□□□ -1.06
RHO-201ENST00000296271 COX6A2Q02221 97 aa8.41□□□□□ -1.06
RHO-201ENST00000296271 GAGE4Q13068 117 aa8.41□□□□□ -1.06
RHO-201ENST00000296271 GAGE5Q13069 117 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms