RNA–Protein interactions for RNA: ENST00000289957.2

CHRNB3-201, Transcript of cholinergic receptor nicotinic beta 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB3, Length 2,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3-201ENST00000289957 PRKDCP78527 4128 aaKnown RBP8.34□□□□□ -1.07
CHRNB3-201ENST00000289957 TRBV6-5A0A0K0K1A5 114 aa8.34□□□□□ -1.07
CHRNB3-201ENST00000289957 MGPP08493 103 aa8.34□□□□□ -1.07
CHRNB3-201ENST00000289957 C14orf178Q8N769 122 aaPredicted RBP8.34□□□□□ -1.07
CHRNB3-201ENST00000289957 TMEM141Q96I45 108 aa8.34□□□□□ -1.07
CHRNB3-201ENST00000289957 HIST1H4GQ99525 98 aa8.34□□□□□ -1.07
CHRNB3-201ENST00000289957 TIMM17AQ99595 171 aa8.34□□□□□ -1.07
CHRNB3-201ENST00000289957 CYSLTR1Q9Y271 337 aa8.34□□□□□ -1.07
CHRNB3-201ENST00000289957 POLR2KP53803 58 aaKnown RBP8.33□□□□□ -1.08
CHRNB3-201ENST00000289957 XCL2Q9UBD3 114 aa8.33□□□□□ -1.08
CHRNB3-201ENST00000289957 TRAV12-3A0A0B4J271 114 aa8.33□□□□□ -1.08
CHRNB3-201ENST00000289957 TMEM238LA0A1B0GVL6 79 aa8.33□□□□□ -1.08
CHRNB3-201ENST00000289957 A6NJY4 79 aa8.33□□□□□ -1.08
CHRNB3-201ENST00000289957 TRPT1Q86TN4 253 aaKnown RBP8.33□□□□□ -1.08
CHRNB3-201ENST00000289957 STHQ8IWL8 128 aa8.33□□□□□ -1.08
CHRNB3-201ENST00000289957 COL7A1Q02388 2944 aa8.33□□□□□ -1.08
CHRNB3-201ENST00000289957 PRSS29PA6NIE9 313 aa8.32□□□□□ -1.08
CHRNB3-201ENST00000289957 EGFEM1PQ0D2K5 195 aa8.32□□□□□ -1.08
CHRNB3-201ENST00000289957 PRADC1Q9BSG0 188 aa8.32□□□□□ -1.08
CHRNB3-201ENST00000289957 MUC4Q99102 2169 aa8.32□□□□□ -1.08
CHRNB3-201ENST00000289957 HERVK_113P61574 105 aa8.32□□□□□ -1.08
CHRNB3-201ENST00000289957 C9orf85Q96MD7 179 aa8.32□□□□□ -1.08
CHRNB3-201ENST00000289957 SPANXB1Q9NS25 103 aaPredicted RBP8.31□□□□□ -1.08
CHRNB3-201ENST00000289957 IGLV4-69A0A075B6H9 119 aa8.31□□□□□ -1.08
CHRNB3-201ENST00000289957 TEX48A0A1B0GUV7 120 aa8.31□□□□□ -1.08
CHRNB3-201ENST00000289957 IGIPA6NJ69 53 aa8.31□□□□□ -1.08
CHRNB3-201ENST00000289957 GNRH2O43555 120 aa8.31□□□□□ -1.08
CHRNB3-201ENST00000289957 CRYGDP07320 174 aa8.31□□□□□ -1.08
CHRNB3-201ENST00000289957 IGHV4-30-4P0DP06 118 aa8.31□□□□□ -1.08
CHRNB3-201ENST00000289957 SCGB1A1P11684 91 aa8.31□□□□□ -1.08
CHRNB3-201ENST00000289957 HTN1P15515 57 aa8.31□□□□□ -1.08
CHRNB3-201ENST00000289957 UBE2D1P51668 147 aa8.31□□□□□ -1.08
CHRNB3-201ENST00000289957 PRO0461Q9UI25 63 aa8.31□□□□□ -1.08
CHRNB3-201ENST00000289957 TRBV27A0A0K0K1C4 114 aa8.3□□□□□ -1.08
CHRNB3-201ENST00000289957 C11orf86A6NJI1 115 aa8.3□□□□□ -1.08
CHRNB3-201ENST00000289957 A8MTW9 85 aa8.3□□□□□ -1.08
CHRNB3-201ENST00000289957 J3QR89 54 aa8.3□□□□□ -1.08
CHRNB3-201ENST00000289957 VCYO14598 125 aa8.3□□□□□ -1.08
CHRNB3-201ENST00000289957 PMVKQ15126 192 aa8.3□□□□□ -1.08
CHRNB3-201ENST00000289957 RHOHQ15669 191 aa8.3□□□□□ -1.08
CHRNB3-201ENST00000289957 SUMO4Q6EEV6 95 aa8.3□□□□□ -1.08
CHRNB3-201ENST00000289957 FAM159AQ6UWV7 190 aa8.3□□□□□ -1.08
CHRNB3-201ENST00000289957 ZFP2Q6ZN57 461 aa8.3□□□□□ -1.08
CHRNB3-201ENST00000289957 IGHV3OR16-12A0A075B7B8 117 aa8.29□□□□□ -1.08
CHRNB3-201ENST00000289957 ZNF815PA8K554 130 aa8.29□□□□□ -1.08
CHRNB3-201ENST00000289957 DUSP14O95147 198 aaKnown RBP8.29□□□□□ -1.08
CHRNB3-201ENST00000289957 TSHBP01222 138 aa8.29□□□□□ -1.08
CHRNB3-201ENST00000289957 MORN3Q6PF18 240 aaPredicted RBP8.29□□□□□ -1.08
CHRNB3-201ENST00000289957 ATP6V0E2Q8NHE4 81 aa8.29□□□□□ -1.08
CHRNB3-201ENST00000289957 TP53TG1Q9Y2A0 90 aa8.29□□□□□ -1.08
CHRNB3-201ENST00000289957 HUWE1Q7Z6Z7 4374 aaKnown RBP8.29□□□□□ -1.08
CHRNB3-201ENST00000289957 LYRM7Q5U5X0 104 aa8.28□□□□□ -1.08
CHRNB3-201ENST00000289957 SYT8Q8NBV8 401 aa8.28□□□□□ -1.08
CHRNB3-201ENST00000289957 KIR2DL4Q99706 377 aa8.28□□□□□ -1.08
CHRNB3-201ENST00000289957 EDA2RQ9HAV5 297 aa8.28□□□□□ -1.08
CHRNB3-201ENST00000289957 NFE4Q86UQ8 179 aa8.28□□□□□ -1.08
CHRNB3-201ENST00000289957 C1orf158Q8N1D5 194 aa8.28□□□□□ -1.08
CHRNB3-201ENST00000289957 FAM110AQ9BQ89 295 aa8.28□□□□□ -1.08
CHRNB3-201ENST00000289957 IGHV3-16A0A0C4DH30 117 aa8.27□□□□□ -1.09
CHRNB3-201ENST00000289957 RPL24P83731 157 aaKnown RBP8.27□□□□□ -1.09
CHRNB3-201ENST00000289957 ZNF876PQ49A33 203 aa8.27□□□□□ -1.09
CHRNB3-201ENST00000289957 SPATA25Q9BR10 227 aa8.27□□□□□ -1.09
CHRNB3-201ENST00000289957 GAGE13Q4V321 117 aa8.27□□□□□ -1.09
CHRNB3-201ENST00000289957 DNAH9Q9NYC9 4486 aa8.26□□□□□ -1.09
CHRNB3-201ENST00000289957 K7EIL1 84 aa8.26□□□□□ -1.09
CHRNB3-201ENST00000289957 AZU1P20160 251 aa8.26□□□□□ -1.09
CHRNB3-201ENST00000289957 CSNK1G2-AS1Q8NCQ2 148 aa8.26□□□□□ -1.09
CHRNB3-201ENST00000289957 PLEKHB2Q96CS7 222 aa8.26□□□□□ -1.09
CHRNB3-201ENST00000289957 A0A0J9YY99 117 aa8.26□□□□□ -1.09
CHRNB3-201ENST00000289957 SDHAF1A6NFY7 115 aa8.26□□□□□ -1.09
CHRNB3-201ENST00000289957 TMEM238C9JI98 176 aa8.26□□□□□ -1.09
CHRNB3-201ENST00000289957 UBE2D3P61077 147 aa8.26□□□□□ -1.09
CHRNB3-201ENST00000289957 UBE2D2P62837 147 aa8.26□□□□□ -1.09
CHRNB3-201ENST00000289957 DEFB135Q30KP9 77 aa8.26□□□□□ -1.09
CHRNB3-201ENST00000289957 KRTAP21-3Q3LHN1 58 aa8.26□□□□□ -1.09
CHRNB3-201ENST00000289957 RETNQ9HD89 108 aa8.26□□□□□ -1.09
CHRNB3-201ENST00000289957 MDFICQ9P1T7 246 aa8.26□□□□□ -1.09
CHRNB3-201ENST00000289957 WFDC2Q14508 124 aa8.25□□□□□ -1.09
CHRNB3-201ENST00000289957 SCGB1D4Q6XE38 83 aa8.25□□□□□ -1.09
CHRNB3-201ENST00000289957 PGPEP1Q9NXJ5 209 aa8.25□□□□□ -1.09
CHRNB3-201ENST00000289957 H3BMG7 143 aa8.24□□□□□ -1.09
CHRNB3-201ENST00000289957 IGHV1OR15-1A0A075B7D0 117 aa8.24□□□□□ -1.09
CHRNB3-201ENST00000289957 M0QY20 66 aa8.24□□□□□ -1.09
CHRNB3-201ENST00000289957 TSPAN13O95857 204 aa8.24□□□□□ -1.09
CHRNB3-201ENST00000289957 CFAP126Q5VTH2 177 aa8.24□□□□□ -1.09
CHRNB3-201ENST00000289957 AMELXQ99217 191 aa8.24□□□□□ -1.09
CHRNB3-201ENST00000289957 TRGV11A0A075B6L2 103 aa8.23□□□□□ -1.09
CHRNB3-201ENST00000289957 SLC25A29Q8N8R3 303 aa8.23□□□□□ -1.09
CHRNB3-201ENST00000289957 LINC01587Q99440 93 aa8.23□□□□□ -1.09
CHRNB3-201ENST00000289957 MRPL16Q9NX20 251 aaKnown RBP8.23□□□□□ -1.09
CHRNB3-201ENST00000289957 LEPROTO15243 131 aa8.23□□□□□ -1.09
CHRNB3-201ENST00000289957 DEFB4AO15263 64 aa8.23□□□□□ -1.09
CHRNB3-201ENST00000289957 IGHV3-30P01768 117 aa8.23□□□□□ -1.09
CHRNB3-201ENST00000289957 IGHV3-30-5P0DP03 117 aa8.23□□□□□ -1.09
CHRNB3-201ENST00000289957 KPRPQ5T749 579 aaPredicted RBP8.23□□□□□ -1.09
CHRNB3-201ENST00000289957 MRAPQ8TCY5 172 aa8.23□□□□□ -1.09
CHRNB3-201ENST00000289957 JPT2Q9H910 190 aa8.23□□□□□ -1.09
CHRNB3-201ENST00000289957 INSP01308 110 aa8.22□□□□□ -1.09
CHRNB3-201ENST00000289957 CRYBA4P53673 196 aa8.22□□□□□ -1.09
CHRNB3-201ENST00000289957 CMC4P56277 68 aaPredicted RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms