RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 A0A1B0GW15 77 aa6.33□□□□□ -1.4
HMHB1-201ENST00000289448 C5orf52A6NGY3 159 aa6.33□□□□□ -1.4
HMHB1-201ENST00000289448 M0R381 172 aa6.33□□□□□ -1.4
HMHB1-201ENST00000289448 SMR3BP02814 79 aaPredicted RBP6.33□□□□□ -1.4
HMHB1-201ENST00000289448 S100A8P05109 93 aa6.33□□□□□ -1.4
HMHB1-201ENST00000289448 HBBP68871 147 aa6.33□□□□□ -1.4
HMHB1-201ENST00000289448 RIGQ13278 110 aa6.33□□□□□ -1.4
HMHB1-201ENST00000289448 FAM74A4Q5TZK3 123 aa6.33□□□□□ -1.4
HMHB1-201ENST00000289448 TMEM136Q6ZRR5 245 aa6.33□□□□□ -1.4
HMHB1-201ENST00000289448 SYT8Q8NBV8 401 aa6.33□□□□□ -1.4
HMHB1-201ENST00000289448 BORCS7Q96B45 105 aa6.33□□□□□ -1.4
HMHB1-201ENST00000289448 PGLYRP4Q96LB8 373 aa6.33□□□□□ -1.4
HMHB1-201ENST00000289448 DNAJC30Q96LL9 226 aa6.33□□□□□ -1.4
HMHB1-201ENST00000289448 MRPL18Q9H0U6 180 aaKnown RBP6.33□□□□□ -1.4
HMHB1-201ENST00000289448 FAM30AQ9NZY2 134 aa6.33□□□□□ -1.4
HMHB1-201ENST00000289448 A0A1B0GUT8 65 aa6.32□□□□□ -1.4
HMHB1-201ENST00000289448 RHODO00212 210 aa6.32□□□□□ -1.4
HMHB1-201ENST00000289448 GZMBP10144 247 aa6.32□□□□□ -1.4
HMHB1-201ENST00000289448 CTRLP40313 264 aa6.32□□□□□ -1.4
HMHB1-201ENST00000289448 NDUFA6P56556 154 aa6.32□□□□□ -1.4
HMHB1-201ENST00000289448 RAB4BP61018 213 aa6.32□□□□□ -1.4
HMHB1-201ENST00000289448 LAGE3Q14657 143 aa6.32□□□□□ -1.4
HMHB1-201ENST00000289448 COA6Q5JTJ3 125 aaKnown RBP6.32□□□□□ -1.4
HMHB1-201ENST00000289448 Q5VSD8 79 aa6.32□□□□□ -1.4
HMHB1-201ENST00000289448 PHLDA3Q9Y5J5 127 aa6.32□□□□□ -1.4
HMHB1-201ENST00000289448 MUC21A0A0G2JKD1 596 aa6.31□□□□□ -1.4
HMHB1-201ENST00000289448 MUC21A0A140T8X8 626 aa6.31□□□□□ -1.4
HMHB1-201ENST00000289448 LECT2O14960 151 aa6.31□□□□□ -1.4
HMHB1-201ENST00000289448 APCSP02743 223 aa6.31□□□□□ -1.4
HMHB1-201ENST00000289448 IGLC6P0CF74 106 aa6.31□□□□□ -1.4
HMHB1-201ENST00000289448 SNRPEP62304 92 aaKnown RBP6.31□□□□□ -1.4
HMHB1-201ENST00000289448 NIT1Q86X76 327 aa6.31□□□□□ -1.4
HMHB1-201ENST00000289448 FER1L6-AS1Q8NA97 138 aa6.31□□□□□ -1.4
HMHB1-201ENST00000289448 OR10AG1Q8NH19 301 aa6.31□□□□□ -1.4
HMHB1-201ENST00000289448 NTN5Q8WTR8 489 aaPredicted RBP6.31□□□□□ -1.4
HMHB1-201ENST00000289448 F2Z2F3 143 aa6.3□□□□□ -1.4
HMHB1-201ENST00000289448 INAFM2P0DMQ5 153 aa6.3□□□□□ -1.4
HMHB1-201ENST00000289448 CAMPP49913 170 aa6.3□□□□□ -1.4
HMHB1-201ENST00000289448 UBE2D3P61077 147 aa6.3□□□□□ -1.4
HMHB1-201ENST00000289448 UBE2D2P62837 147 aa6.3□□□□□ -1.4
HMHB1-201ENST00000289448 GATD1Q8NB37 220 aa6.3□□□□□ -1.4
HMHB1-201ENST00000289448 TMEM70Q9BUB7 260 aa6.3□□□□□ -1.4
HMHB1-201ENST00000289448 TPPP3Q9BW30 176 aa6.3□□□□□ -1.4
HMHB1-201ENST00000289448 TM2D2Q9BX73 214 aa6.3□□□□□ -1.4
HMHB1-201ENST00000289448 CNFNQ9BYD5 112 aa6.3□□□□□ -1.4
HMHB1-201ENST00000289448 TRAV8-3A0A0A6YYJ7 113 aa6.29□□□□□ -1.4
HMHB1-201ENST00000289448 LYZL1Q6UWQ5 148 aa6.29□□□□□ -1.4
HMHB1-201ENST00000289448 BAALCQ8WXS3 180 aa6.29□□□□□ -1.4
HMHB1-201ENST00000289448 TRBV7-3A0A075B6L6 115 aa6.28□□□□□ -1.4
HMHB1-201ENST00000289448 TRBV10-1A0A0K0K1A3 114 aa6.28□□□□□ -1.4
HMHB1-201ENST00000289448 SNAI2O43623 268 aa6.28□□□□□ -1.4
HMHB1-201ENST00000289448 OR5AL1P0C617 328 aa6.28□□□□□ -1.4
HMHB1-201ENST00000289448 Q0VG73 95 aa6.28□□□□□ -1.4
HMHB1-201ENST00000289448 SSBP4Q9BWG4 385 aaPredicted RBP6.28□□□□□ -1.4
HMHB1-201ENST00000289448 KLK12Q9UKR0 248 aa6.28□□□□□ -1.4
HMHB1-201ENST00000289448 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.27□□□□□ -1.41
HMHB1-201ENST00000289448 S100A2P29034 98 aa6.27□□□□□ -1.41
HMHB1-201ENST00000289448 AKR1D1P51857 326 aa6.27□□□□□ -1.41
HMHB1-201ENST00000289448 SSTP61278 116 aa6.27□□□□□ -1.41
HMHB1-201ENST00000289448 CACNG7P62955 275 aa6.27□□□□□ -1.41
HMHB1-201ENST00000289448 RPL36AP83881 106 aaKnown RBP6.27□□□□□ -1.41
HMHB1-201ENST00000289448 KIAA1644Q3SXP7 199 aa6.27□□□□□ -1.41
HMHB1-201ENST00000289448 LINC01620Q4KN68 170 aa6.27□□□□□ -1.41
HMHB1-201ENST00000289448 Q6ZSA8 131 aa6.27□□□□□ -1.41
HMHB1-201ENST00000289448 HIST3H2BBQ8N257 126 aa6.27□□□□□ -1.41
HMHB1-201ENST00000289448 NEXN-AS1Q8NBZ9 246 aa6.27□□□□□ -1.41
HMHB1-201ENST00000289448 RPL36ALQ969Q0 106 aaKnown RBP6.27□□□□□ -1.41
HMHB1-201ENST00000289448 IGKV2D-24A0A075B6R9 120 aa6.26□□□□□ -1.41
HMHB1-201ENST00000289448 TWIST1Q15672 202 aa6.26□□□□□ -1.41
HMHB1-201ENST00000289448 ZNF56Q15929 161 aa6.26□□□□□ -1.41
HMHB1-201ENST00000289448 BAGE3Q86Y29 109 aa6.26□□□□□ -1.41
HMHB1-201ENST00000289448 UBE2WQ96B02 151 aa6.26□□□□□ -1.41
HMHB1-201ENST00000289448 KIF25-AS1Q9Y6Z4 181 aa6.26□□□□□ -1.41
HMHB1-201ENST00000289448 LRP1Q07954 4544 aaKnown RBP6.25□□□□□ -1.41
HMHB1-201ENST00000289448 A0A087WX48 190 aa6.25□□□□□ -1.41
HMHB1-201ENST00000289448 TRBV6-8A0A0A6YYG3 113 aa6.25□□□□□ -1.41
HMHB1-201ENST00000289448 IFITM10A6NMD0 228 aa6.25□□□□□ -1.41
HMHB1-201ENST00000289448 FAM229AH3BQW9 127 aa6.25□□□□□ -1.41
HMHB1-201ENST00000289448 ESDP10768 282 aa6.25□□□□□ -1.41
HMHB1-201ENST00000289448 NTF3P20783 257 aa6.25□□□□□ -1.41
HMHB1-201ENST00000289448 SPANXN1Q5VSR9 72 aa6.25□□□□□ -1.41
HMHB1-201ENST00000289448 FAM104BQ5XKR9 115 aa6.25□□□□□ -1.41
HMHB1-201ENST00000289448 ENHOQ6UWT2 76 aa6.25□□□□□ -1.41
HMHB1-201ENST00000289448 NTM-AS1Q6ZSK4 140 aa6.25□□□□□ -1.41
HMHB1-201ENST00000289448 SMIM15Q7Z3B0 74 aa6.25□□□□□ -1.41
HMHB1-201ENST00000289448 ALKBH7Q9BT30 221 aaPredicted RBP6.25□□□□□ -1.41
HMHB1-201ENST00000289448 CHCHD7Q9BUK0 85 aa6.25□□□□□ -1.41
HMHB1-201ENST00000289448 TMEM191AQ9H0A3 160 aa6.25□□□□□ -1.41
HMHB1-201ENST00000289448 COX11Q9Y6N1 276 aa6.25□□□□□ -1.41
HMHB1-201ENST00000289448 TMEM262E9PQX1 116 aa6.24□□□□□ -1.41
HMHB1-201ENST00000289448 F5H697 171 aa6.24□□□□□ -1.41
HMHB1-201ENST00000289448 SERF1AO75920 110 aa6.24□□□□□ -1.41
HMHB1-201ENST00000289448 MPV17L2Q567V2 206 aa6.24□□□□□ -1.41
HMHB1-201ENST00000289448 C18orf32Q8TCD1 76 aa6.24□□□□□ -1.41
HMHB1-201ENST00000289448 TMEM18Q96B42 140 aa6.24□□□□□ -1.41
HMHB1-201ENST00000289448 RMI2Q96E14 147 aa6.24□□□□□ -1.41
HMHB1-201ENST00000289448 HIST1H2BLQ99880 126 aa6.24□□□□□ -1.41
HMHB1-201ENST00000289448 PPBPP02775 128 aa6.23□□□□□ -1.41
HMHB1-201ENST00000289448 PDZD11Q5EBL8 140 aa6.23□□□□□ -1.41
HMHB1-201ENST00000289448 Q8N976 141 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms