RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 URB1-AS1Q96HZ7 61 aa9.56□□□□□ -0.88
SLC6A1-201ENST00000287766 Q9HAA7 133 aa9.56□□□□□ -0.88
SLC6A1-201ENST00000287766 A0A0U1RQV1 116 aa9.56□□□□□ -0.88
SLC6A1-201ENST00000287766 ODF3BA8MYP8 253 aa9.56□□□□□ -0.88
SLC6A1-201ENST00000287766 XGP55808 180 aa9.56□□□□□ -0.88
SLC6A1-201ENST00000287766 C20orf197Q8N268 126 aa9.56□□□□□ -0.88
SLC6A1-201ENST00000287766 SMAD5-AS1Q9Y6J3 95 aa9.56□□□□□ -0.88
SLC6A1-201ENST00000287766 USP34Q70CQ2 3546 aa9.56□□□□□ -0.88
SLC6A1-201ENST00000287766 LINC00643Q86TS7 51 aa9.56□□□□□ -0.88
SLC6A1-201ENST00000287766 LECT2O14960 151 aa9.55□□□□□ -0.88
SLC6A1-201ENST00000287766 Q6ZQT7 251 aa9.55□□□□□ -0.88
SLC6A1-201ENST00000287766 C2orf91Q6ZV80 131 aa9.55□□□□□ -0.88
SLC6A1-201ENST00000287766 FN1P02751 2386 aaKnown RBP9.55□□□□□ -0.88
SLC6A1-201ENST00000287766 NDUFC2O95298 119 aa9.55□□□□□ -0.88
SLC6A1-201ENST00000287766 RAI1Q7Z5J4 1906 aaPredicted RBP9.55□□□□□ -0.88
SLC6A1-201ENST00000287766 A0A096LPF7 62 aa9.55□□□□□ -0.88
SLC6A1-201ENST00000287766 CCDC179H3BU77 68 aa9.55□□□□□ -0.88
SLC6A1-201ENST00000287766 LMO4P61968 165 aa9.55□□□□□ -0.88
SLC6A1-201ENST00000287766 PKD1L2Q7Z442 2459 aa9.55□□□□□ -0.88
SLC6A1-201ENST00000287766 FBXL19-AS1Q494R0 122 aa9.55□□□□□ -0.88
SLC6A1-201ENST00000287766 C16orf54Q6UWD8 224 aa9.55□□□□□ -0.88
SLC6A1-201ENST00000287766 CENPEQ02224 2701 aa9.55□□□□□ -0.88
SLC6A1-201ENST00000287766 IGHV4-4A0A075B6R2 117 aa9.54□□□□□ -0.88
SLC6A1-201ENST00000287766 TRAV23DV6A0A075B6W5 121 aa9.54□□□□□ -0.88
SLC6A1-201ENST00000287766 IGHG2P01859 326 aa9.54□□□□□ -0.88
SLC6A1-201ENST00000287766 LINC01356Q8N9X3 169 aa9.54□□□□□ -0.88
SLC6A1-201ENST00000287766 XCL1P47992 114 aa9.54□□□□□ -0.88
SLC6A1-201ENST00000287766 MRPL53Q96EL3 112 aaKnown RBP9.54□□□□□ -0.88
SLC6A1-201ENST00000287766 TRAV4A0A0B4J268 109 aa9.54□□□□□ -0.88
SLC6A1-201ENST00000287766 TNFRSF13BO14836 293 aaPredicted RBP9.54□□□□□ -0.88
SLC6A1-201ENST00000287766 UQCRQO14949 82 aa9.54□□□□□ -0.88
SLC6A1-201ENST00000287766 NSUN5P1Q3KNT7 163 aa9.54□□□□□ -0.88
SLC6A1-201ENST00000287766 TOMM6Q96B49 74 aa9.53□□□□□ -0.88
SLC6A1-201ENST00000287766 SDIM1Q6ZPB5 146 aa9.52□□□□□ -0.88
SLC6A1-201ENST00000287766 C14orf132Q9NPU4 83 aa9.52□□□□□ -0.88
SLC6A1-201ENST00000287766 IGHV4-28A0A0C4DH34 117 aa9.52□□□□□ -0.89
SLC6A1-201ENST00000287766 SLC25A29Q8N8R3 303 aa9.52□□□□□ -0.89
SLC6A1-201ENST00000287766 LENEPQ9Y5L5 61 aa9.52□□□□□ -0.89
SLC6A1-201ENST00000287766 PRRC2AP48634 2157 aaKnown RBP9.51□□□□□ -0.89
SLC6A1-201ENST00000287766 TRBV6-1A0A0K0K1D8 114 aa9.51□□□□□ -0.89
SLC6A1-201ENST00000287766 H0YGX0 51 aa9.51□□□□□ -0.89
SLC6A1-201ENST00000287766 COX7B2Q8TF08 81 aa9.51□□□□□ -0.89
SLC6A1-201ENST00000287766 TNRC6BQ9UPQ9 1833 aaKnown RBP9.51□□□□□ -0.89
SLC6A1-201ENST00000287766 PTPRBP23467 1997 aa9.51□□□□□ -0.89
SLC6A1-201ENST00000287766 ZNF561-AS1K7EIQ3 104 aa9.51□□□□□ -0.89
SLC6A1-201ENST00000287766 IGHV3-30-3P0DP02 117 aa9.51□□□□□ -0.89
SLC6A1-201ENST00000287766 PIFOQ8TCI5 191 aa9.51□□□□□ -0.89
SLC6A1-201ENST00000287766 FSTL3O95633 263 aa9.5□□□□□ -0.89
SLC6A1-201ENST00000287766 HIST2H2BDQ6DRA6 164 aa9.5□□□□□ -0.89
SLC6A1-201ENST00000287766 CEMP1Q6PRD7 247 aaPredicted RBP9.5□□□□□ -0.89
SLC6A1-201ENST00000287766 C9orf47Q6ZRZ4 202 aa9.5□□□□□ -0.89
SLC6A1-201ENST00000287766 C11orf21Q9P2W6 132 aa9.5□□□□□ -0.89
SLC6A1-201ENST00000287766 DEFB105AQ8NG35 78 aa9.5□□□□□ -0.89
SLC6A1-201ENST00000287766 C20orf173Q96LM9 149 aa9.5□□□□□ -0.89
SLC6A1-201ENST00000287766 ATP5G1P05496 136 aa9.5□□□□□ -0.89
SLC6A1-201ENST00000287766 HIST2H2BCQ6DN03 193 aa9.5□□□□□ -0.89
SLC6A1-201ENST00000287766 ZFAND3Q9H8U3 227 aa9.5□□□□□ -0.89
SLC6A1-201ENST00000287766 TMEM61Q8N0U2 210 aa9.49□□□□□ -0.89
SLC6A1-201ENST00000287766 MPLKIPQ8TAP9 179 aa9.49□□□□□ -0.89
SLC6A1-201ENST00000287766 ANGP03950 147 aaKnown RBP9.49□□□□□ -0.89
SLC6A1-201ENST00000287766 DSCR9P59020 149 aa9.49□□□□□ -0.89
SLC6A1-201ENST00000287766 MRGPRG-AS1Q2M3A8 158 aa9.49□□□□□ -0.89
SLC6A1-201ENST00000287766 C10orf105Q8TEF2 133 aa9.49□□□□□ -0.89
SLC6A1-201ENST00000287766 U3KQE9 123 aa9.49□□□□□ -0.89
SLC6A1-201ENST00000287766 CDK2AP2O75956 126 aa9.49□□□□□ -0.89
SLC6A1-201ENST00000287766 SLURP1P55000 103 aa9.49□□□□□ -0.89
SLC6A1-201ENST00000287766 TIMM17AQ99595 171 aa9.49□□□□□ -0.89
SLC6A1-201ENST00000287766 C10orf99Q6UWK7 81 aa9.48□□□□□ -0.89
SLC6A1-201ENST00000287766 APRG1Q8IVJ8 170 aa9.48□□□□□ -0.89
SLC6A1-201ENST00000287766 SPATA25Q9BR10 227 aa9.48□□□□□ -0.89
SLC6A1-201ENST00000287766 MDFICQ9P1T7 246 aa9.48□□□□□ -0.89
SLC6A1-201ENST00000287766 SVIPQ8NHG7 77 aa9.48□□□□□ -0.89
SLC6A1-201ENST00000287766 ACANP16112 2415 aa9.48□□□□□ -0.89
SLC6A1-201ENST00000287766 A0A1W2PPR1 153 aa9.48□□□□□ -0.89
SLC6A1-201ENST00000287766 MRPS12O15235 138 aaKnown RBP9.48□□□□□ -0.89
SLC6A1-201ENST00000287766 RNF185Q96GF1 192 aa9.48□□□□□ -0.89
SLC6A1-201ENST00000287766 M0QXV9 152 aa9.47□□□□□ -0.89
SLC6A1-201ENST00000287766 DAZ2Q13117 558 aaKnown RBP9.47□□□□□ -0.89
SLC6A1-201ENST00000287766 DAZ4Q86SG3 579 aaKnown RBP9.47□□□□□ -0.89
SLC6A1-201ENST00000287766 RNF152Q8N8N0 203 aa9.47□□□□□ -0.89
SLC6A1-201ENST00000287766 Q96MF0 132 aa9.47□□□□□ -0.89
SLC6A1-201ENST00000287766 DAZ3Q9NR90 486 aaKnown RBP9.47□□□□□ -0.89
SLC6A1-201ENST00000287766 SRSF2Q01130 221 aaKnown RBP9.47□□□□□ -0.89
SLC6A1-201ENST00000287766 C11orf71Q6IPW1 123 aa9.47□□□□□ -0.89
SLC6A1-201ENST00000287766 WFDC9Q8NEX5 89 aa9.47□□□□□ -0.89
SLC6A1-201ENST00000287766 EPG5Q9HCE0 2579 aa9.47□□□□□ -0.89
SLC6A1-201ENST00000287766 A0A0J9YY99 117 aa9.47□□□□□ -0.89
SLC6A1-201ENST00000287766 Q6ZS46 218 aa9.47□□□□□ -0.89
SLC6A1-201ENST00000287766 C3orf22Q8N5N4 141 aa9.47□□□□□ -0.89
SLC6A1-201ENST00000287766 F5H768 121 aa9.46□□□□□ -0.9
SLC6A1-201ENST00000287766 PRR9Q5T870 116 aa9.46□□□□□ -0.9
SLC6A1-201ENST00000287766 CFAP126Q5VTH2 177 aa9.46□□□□□ -0.9
SLC6A1-201ENST00000287766 MIR7-3HGQ8N6C7 128 aa9.46□□□□□ -0.9
SLC6A1-201ENST00000287766 NKAPP1Q8N9T2 125 aa9.46□□□□□ -0.9
SLC6A1-201ENST00000287766 A0A0J9YXY3 114 aa9.45□□□□□ -0.9
SLC6A1-201ENST00000287766 IGLV10-54A0A075B6I4 117 aa9.45□□□□□ -0.9
SLC6A1-201ENST00000287766 IGHV4OR15-8A0A075B7B6 117 aa9.45□□□□□ -0.9
SLC6A1-201ENST00000287766 A0A087WW49 117 aa9.45□□□□□ -0.9
SLC6A1-201ENST00000287766 IGHV1-58A0A0C4DH39 117 aa9.45□□□□□ -0.9
SLC6A1-201ENST00000287766 TRIAP1O43715 76 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms