RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 CRLF1O75462 422 aa20.11■□□□□ 0.81
CBX4-201ENST00000269397 NDUFA12Q9UI09 145 aa20.11■□□□□ 0.81
CBX4-201ENST00000269397 MRPS36P82909 103 aaKnown RBP20.11■□□□□ 0.81
CBX4-201ENST00000269397 TRGV11A0A075B6L2 103 aa20.1■□□□□ 0.81
CBX4-201ENST00000269397 DEFB112Q30KQ8 113 aa20.1■□□□□ 0.81
CBX4-201ENST00000269397 Q6ZSN1 163 aa20.1■□□□□ 0.81
CBX4-201ENST00000269397 TNFRSF18Q9Y5U5 241 aa20.1■□□□□ 0.81
CBX4-201ENST00000269397 NACAE9PAV3 2078 aa20.09■□□□□ 0.81
CBX4-201ENST00000269397 IGKV2D-29A0A075B6S2 120 aaPredicted RBP20.09■□□□□ 0.81
CBX4-201ENST00000269397 TRAV4A0A0B4J268 109 aa20.09■□□□□ 0.81
CBX4-201ENST00000269397 IGKV2-29A2NJV5 120 aaPredicted RBP20.09■□□□□ 0.81
CBX4-201ENST00000269397 CITED1Q99966 193 aa20.09■□□□□ 0.81
CBX4-201ENST00000269397 IGHV3-38A0A0C4DH36 116 aa20.08■□□□□ 0.8
CBX4-201ENST00000269397 IGHV1-58A0A0C4DH39 117 aa20.08■□□□□ 0.8
CBX4-201ENST00000269397 DAND5Q8N907 189 aa20.08■□□□□ 0.8
CBX4-201ENST00000269397 CFAP46Q8IYW2 2715 aa20.08■□□□□ 0.8
CBX4-201ENST00000269397 TRBV30A0A0K0K1B3 111 aa20.07■□□□□ 0.8
CBX4-201ENST00000269397 PYGO1Q9Y3Y4 419 aa20.07■□□□□ 0.8
CBX4-201ENST00000269397 MXRA5Q9NR99 2828 aa20.07■□□□□ 0.8
CBX4-201ENST00000269397 ICOSQ9Y6W8 199 aa20.07■□□□□ 0.8
CBX4-201ENST00000269397 CLEC2BQ92478 149 aa20.06■□□□□ 0.8
CBX4-201ENST00000269397 M0QXV9 152 aa20.06■□□□□ 0.8
CBX4-201ENST00000269397 HOXD3P31249 432 aaPredicted RBP20.06■□□□□ 0.8
CBX4-201ENST00000269397 POLQO75417 2590 aa20.06■□□□□ 0.8
CBX4-201ENST00000269397 NRGNQ92686 78 aa20.05■□□□□ 0.8
CBX4-201ENST00000269397 TRBV10-2A0A0K0K1G8 114 aa20.05■□□□□ 0.8
CBX4-201ENST00000269397 SNCGO76070 127 aa20.05■□□□□ 0.8
CBX4-201ENST00000269397 VSIG2Q96IQ7 327 aa20.04■□□□□ 0.8
CBX4-201ENST00000269397 CENPEQ02224 2701 aa20.04■□□□□ 0.8
CBX4-201ENST00000269397 DEFB131AP59861 70 aa20.04■□□□□ 0.8
CBX4-201ENST00000269397 DUX3Q96PT4 197 aa20.03■□□□□ 0.8
CBX4-201ENST00000269397 C2orf82Q6UX34 121 aa20.03■□□□□ 0.8
CBX4-201ENST00000269397 DEFB136Q30KP8 78 aa20.02■□□□□ 0.8
CBX4-201ENST00000269397 CHCHD7Q9BUK0 85 aa20.02■□□□□ 0.8
CBX4-201ENST00000269397 USP9XQ93008 2570 aaPredicted RBP20.02■□□□□ 0.8
CBX4-201ENST00000269397 GAGE2BQ13066 116 aa20.02■□□□□ 0.8
CBX4-201ENST00000269397 GAGE2EQ4V326 116 aa20.02■□□□□ 0.8
CBX4-201ENST00000269397 GAGE2DQ9UEU5 116 aa20.02■□□□□ 0.8
CBX4-201ENST00000269397 H7C423 109 aa20.01■□□□□ 0.79
CBX4-201ENST00000269397 MAPK1IP1LQ8NDC0 245 aa20.01■□□□□ 0.79
CBX4-201ENST00000269397 TRAV8-4A0A0B4J246 113 aa20.01■□□□□ 0.79
CBX4-201ENST00000269397 B4DSR2 109 aa20.01■□□□□ 0.79
CBX4-201ENST00000269397 MIAQ16674 131 aa20.01■□□□□ 0.79
CBX4-201ENST00000269397 LINC00467Q9BRT7 94 aa20.01■□□□□ 0.79
CBX4-201ENST00000269397 UBE2D4Q9Y2X8 147 aa20.01■□□□□ 0.79
CBX4-201ENST00000269397 H3BMM0 161 aa20■□□□□ 0.79
CBX4-201ENST00000269397 UBE2WQ96B02 151 aa20■□□□□ 0.79
CBX4-201ENST00000269397 NHLRC4P0CG21 123 aaPredicted RBP20■□□□□ 0.79
CBX4-201ENST00000269397 RBMY1BA6NDE4 496 aaKnown RBP19.99■□□□□ 0.79
CBX4-201ENST00000269397 RBMY1EA6NEQ0 496 aaKnown RBP19.99■□□□□ 0.79
CBX4-201ENST00000269397 RBMY1DP0C7P1 496 aaKnown RBP19.99■□□□□ 0.79
CBX4-201ENST00000269397 SPANXDQ9BXN6 97 aa19.99■□□□□ 0.79
CBX4-201ENST00000269397 SPANXCQ9NY87 97 aa19.99■□□□□ 0.79
CBX4-201ENST00000269397 C18orf65Q6ZTR6 163 aa19.99■□□□□ 0.79
CBX4-201ENST00000269397 TINCRA0A1B0GVN0 87 aa19.98■□□□□ 0.79
CBX4-201ENST00000269397 SLURP1P55000 103 aa19.97■□□□□ 0.79
CBX4-201ENST00000269397 CDKN2A-AS1Q9UH64 79 aa19.97■□□□□ 0.79
CBX4-201ENST00000269397 MYO9AB2RTY4 2548 aa19.97■□□□□ 0.79
CBX4-201ENST00000269397 RPL13AP40429 203 aaKnown RBP19.97■□□□□ 0.79
CBX4-201ENST00000269397 SS18L2Q9UHA2 77 aa19.97■□□□□ 0.79
CBX4-201ENST00000269397 A0A0U1RRA0 63 aa19.96■□□□□ 0.79
CBX4-201ENST00000269397 C15orf53Q8NAA6 179 aa19.96■□□□□ 0.79
CBX4-201ENST00000269397 HIST2H2BDQ6DRA6 164 aa19.95■□□□□ 0.78
CBX4-201ENST00000269397 PKD1L2Q7Z442 2459 aa19.95■□□□□ 0.78
CBX4-201ENST00000269397 COX6CP09669 75 aa19.95■□□□□ 0.78
CBX4-201ENST00000269397 TMEM61Q8N0U2 210 aa19.95■□□□□ 0.78
CBX4-201ENST00000269397 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP19.95■□□□□ 0.78
CBX4-201ENST00000269397 NOTCH3Q9UM47 2321 aa19.94■□□□□ 0.78
CBX4-201ENST00000269397 B5MCH6 92 aa19.94■□□□□ 0.78
CBX4-201ENST00000269397 ZNF625Q96I27 306 aaPredicted RBP19.94■□□□□ 0.78
CBX4-201ENST00000269397 NDUFV3P56181 108 aaKnown RBP19.94■□□□□ 0.78
CBX4-201ENST00000269397 EDA2RQ9HAV5 297 aa19.93■□□□□ 0.78
CBX4-201ENST00000269397 SPANXA1Q9NS26 97 aa19.93■□□□□ 0.78
CBX4-201ENST00000269397 TTC32Q5I0X7 151 aa19.92■□□□□ 0.78
CBX4-201ENST00000269397 C2CD3Q4AC94 2353 aa19.92■□□□□ 0.78
CBX4-201ENST00000269397 RNF152Q8N8N0 203 aa19.91■□□□□ 0.78
CBX4-201ENST00000269397 ANKRD17O75179 2603 aaKnown RBP19.91■□□□□ 0.78
CBX4-201ENST00000269397 DOPEY1Q5JWR5 2465 aa19.91■□□□□ 0.78
CBX4-201ENST00000269397 COX6A2Q02221 97 aa19.9■□□□□ 0.78
CBX4-201ENST00000269397 GAGE5Q13069 117 aa19.9■□□□□ 0.78
CBX4-201ENST00000269397 GAGE6Q13070 117 aa19.9■□□□□ 0.78
CBX4-201ENST00000269397 LINC01587Q99440 93 aa19.9■□□□□ 0.78
CBX4-201ENST00000269397 TMEM101Q96IK0 257 aa19.89■□□□□ 0.78
CBX4-201ENST00000269397 MYO18BQ8IUG5 2567 aa19.89■□□□□ 0.77
CBX4-201ENST00000269397 ZNF415Q09FC8 603 aa19.89■□□□□ 0.77
CBX4-201ENST00000269397 TMEM89A2RUT3 159 aa19.89■□□□□ 0.77
CBX4-201ENST00000269397 LINC01600Q96MT4 127 aa19.89■□□□□ 0.77
CBX4-201ENST00000269397 LST1O00453 97 aa19.88■□□□□ 0.77
CBX4-201ENST00000269397 DGAT2L7PQ6IED9 249 aa19.87■□□□□ 0.77
CBX4-201ENST00000269397 UBE2E2Q96LR5 201 aa19.87■□□□□ 0.77
CBX4-201ENST00000269397 NDUFA7O95182 113 aa19.87■□□□□ 0.77
CBX4-201ENST00000269397 IFITM1P13164 125 aa19.87■□□□□ 0.77
CBX4-201ENST00000269397 YAE1D1Q9NRH1 226 aa19.86■□□□□ 0.77
CBX4-201ENST00000269397 CCDC179H3BU77 68 aa19.86■□□□□ 0.77
CBX4-201ENST00000269397 CITED2Q99967 270 aaPredicted RBP19.86■□□□□ 0.77
CBX4-201ENST00000269397 H3BT86 120 aa19.85■□□□□ 0.77
CBX4-201ENST00000269397 ZNF702PQ9H963 129 aa19.85■□□□□ 0.77
CBX4-201ENST00000269397 Q9H8V8 135 aa19.84■□□□□ 0.77
CBX4-201ENST00000269397 IGHV3-53P01767 116 aa19.84■□□□□ 0.77
CBX4-201ENST00000269397 C11orf72Q8NBR9 251 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms