RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 Q6ZS46 218 aa8.72□□□□□ -1.01
VPS33A-201ENST00000267199 TRAV4A0A0B4J268 109 aa8.72□□□□□ -1.01
VPS33A-201ENST00000267199 TRANK1O15050 2925 aa8.72□□□□□ -1.01
VPS33A-201ENST00000267199 IGHV1-58A0A0C4DH39 117 aa8.71□□□□□ -1.01
VPS33A-201ENST00000267199 NRACQ8N912 160 aa8.71□□□□□ -1.01
VPS33A-201ENST00000267199 FN1P02751 2386 aaKnown RBP8.71□□□□□ -1.01
VPS33A-201ENST00000267199 TNFRSF13BO14836 293 aaPredicted RBP8.71□□□□□ -1.01
VPS33A-201ENST00000267199 RBMY1FQ15415 496 aaKnown RBP8.71□□□□□ -1.01
VPS33A-201ENST00000267199 NFE4Q86UQ8 179 aa8.71□□□□□ -1.01
VPS33A-201ENST00000267199 NOP10Q9NPE3 64 aaKnown RBP8.71□□□□□ -1.01
VPS33A-201ENST00000267199 TRIAP1O43715 76 aa8.71□□□□□ -1.02
VPS33A-201ENST00000267199 IGHV3-33P01772 117 aa8.71□□□□□ -1.02
VPS33A-201ENST00000267199 TRBV7-3A0A075B6L6 115 aa8.71□□□□□ -1.02
VPS33A-201ENST00000267199 JMJD1CQ15652 2540 aa8.71□□□□□ -1.02
VPS33A-201ENST00000267199 K7EMT4 169 aa8.7□□□□□ -1.02
VPS33A-201ENST00000267199 LECT2O14960 151 aa8.7□□□□□ -1.02
VPS33A-201ENST00000267199 C20orf173Q96LM9 149 aa8.7□□□□□ -1.02
VPS33A-201ENST00000267199 PKD1L2Q7Z442 2459 aa8.7□□□□□ -1.02
VPS33A-201ENST00000267199 IGHV4OR15-8A0A075B7B6 117 aa8.7□□□□□ -1.02
VPS33A-201ENST00000267199 A0A087WW49 117 aa8.7□□□□□ -1.02
VPS33A-201ENST00000267199 MRPS12O15235 138 aaKnown RBP8.7□□□□□ -1.02
VPS33A-201ENST00000267199 DPH3Q96FX2 82 aa8.7□□□□□ -1.02
VPS33A-201ENST00000267199 VSIG2Q96IQ7 327 aa8.7□□□□□ -1.02
VPS33A-201ENST00000267199 CCDC179H3BU77 68 aa8.7□□□□□ -1.02
VPS33A-201ENST00000267199 ZNF22P17026 224 aaPredicted RBP8.7□□□□□ -1.02
VPS33A-201ENST00000267199 GPHB5Q86YW7 130 aa8.7□□□□□ -1.02
VPS33A-201ENST00000267199 POLQO75417 2590 aa8.69□□□□□ -1.02
VPS33A-201ENST00000267199 PRUNE2Q8WUY3 3088 aa8.69□□□□□ -1.02
VPS33A-201ENST00000267199 A8MZ25 164 aa8.69□□□□□ -1.02
VPS33A-201ENST00000267199 C19orf84I3L1E1 186 aa8.69□□□□□ -1.02
VPS33A-201ENST00000267199 ATOX1O00244 68 aa8.69□□□□□ -1.02
VPS33A-201ENST00000267199 MED14OSP0DP75 135 aa8.69□□□□□ -1.02
VPS33A-201ENST00000267199 RBM3P98179 157 aaKnown RBP8.69□□□□□ -1.02
VPS33A-201ENST00000267199 COL4A2P08572 1712 aa8.69□□□□□ -1.02
VPS33A-201ENST00000267199 SPANXDQ9BXN6 97 aa8.69□□□□□ -1.02
VPS33A-201ENST00000267199 ORMDL1Q9P0S3 153 aa8.69□□□□□ -1.02
VPS33A-201ENST00000267199 MTORP42345 2549 aa8.69□□□□□ -1.02
VPS33A-201ENST00000267199 A6NDX4 124 aa8.68□□□□□ -1.02
VPS33A-201ENST00000267199 J3KT08 172 aa8.68□□□□□ -1.02
VPS33A-201ENST00000267199 TRAV25A0A0B4J276 109 aa8.68□□□□□ -1.02
VPS33A-201ENST00000267199 CDSNQ15517 529 aa8.68□□□□□ -1.02
VPS33A-201ENST00000267199 PRR9Q5T870 116 aa8.68□□□□□ -1.02
VPS33A-201ENST00000267199 C11orf71Q6IPW1 123 aa8.68□□□□□ -1.02
VPS33A-201ENST00000267199 ZFAND2AQ8N6M9 145 aa8.68□□□□□ -1.02
VPS33A-201ENST00000267199 ADAMTS20P59510 1910 aa8.68□□□□□ -1.02
VPS33A-201ENST00000267199 MIAQ16674 131 aa8.68□□□□□ -1.02
VPS33A-201ENST00000267199 DOPEY1Q5JWR5 2465 aa8.68□□□□□ -1.02
VPS33A-201ENST00000267199 C14orf132Q9NPU4 83 aa8.68□□□□□ -1.02
VPS33A-201ENST00000267199 IGHV3-30P01768 117 aa8.67□□□□□ -1.02
VPS33A-201ENST00000267199 IGHV3-30-5P0DP03 117 aa8.67□□□□□ -1.02
VPS33A-201ENST00000267199 Q8N6K4 173 aa8.67□□□□□ -1.02
VPS33A-201ENST00000267199 A0A0J9YX75 114 aa8.67□□□□□ -1.02
VPS33A-201ENST00000267199 MIR7-3HGQ8N6C7 128 aa8.67□□□□□ -1.02
VPS33A-201ENST00000267199 MRAPQ8TCY5 172 aa8.67□□□□□ -1.02
VPS33A-201ENST00000267199 CDKN2A-AS1Q9UH64 79 aa8.67□□□□□ -1.02
VPS33A-201ENST00000267199 ATP5G1P05496 136 aa8.67□□□□□ -1.02
VPS33A-201ENST00000267199 LINC00643Q86TS7 51 aa8.67□□□□□ -1.02
VPS33A-201ENST00000267199 RPL32P62910 135 aaKnown RBP8.66□□□□□ -1.02
VPS33A-201ENST00000267199 DSCR8Q96T75 97 aa8.66□□□□□ -1.02
VPS33A-201ENST00000267199 CFAP54Q96N23 3096 aa8.66□□□□□ -1.02
VPS33A-201ENST00000267199 DAZ2Q13117 558 aaKnown RBP8.66□□□□□ -1.02
VPS33A-201ENST00000267199 DAZ4Q86SG3 579 aaKnown RBP8.66□□□□□ -1.02
VPS33A-201ENST00000267199 DAZ3Q9NR90 486 aaKnown RBP8.66□□□□□ -1.02
VPS33A-201ENST00000267199 ANGP03950 147 aaKnown RBP8.66□□□□□ -1.02
VPS33A-201ENST00000267199 IGLV4-3A0A075B6K6 122 aa8.65□□□□□ -1.02
VPS33A-201ENST00000267199 IGLV10-54A0A075B6I4 117 aa8.65□□□□□ -1.02
VPS33A-201ENST00000267199 TMEM223A0PJW6 202 aa8.65□□□□□ -1.02
VPS33A-201ENST00000267199 HIST2H2BCQ6DN03 193 aa8.65□□□□□ -1.02
VPS33A-201ENST00000267199 SDIM1Q6ZPB5 146 aa8.65□□□□□ -1.02
VPS33A-201ENST00000267199 C1orf43Q9BWL3 253 aa8.65□□□□□ -1.02
VPS33A-201ENST00000267199 TRIOO75962 3097 aa8.65□□□□□ -1.03
VPS33A-201ENST00000267199 PRRC2AP48634 2157 aaKnown RBP8.65□□□□□ -1.03
VPS33A-201ENST00000267199 IGHV4-4A0A075B6R2 117 aa8.64□□□□□ -1.03
VPS33A-201ENST00000267199 TMEM61Q8N0U2 210 aa8.64□□□□□ -1.03
VPS33A-201ENST00000267199 H0YGX0 51 aa8.64□□□□□ -1.03
VPS33A-201ENST00000267199 CRIP2P52943 208 aaPredicted RBP8.64□□□□□ -1.03
VPS33A-201ENST00000267199 F5H768 121 aa8.63□□□□□ -1.03
VPS33A-201ENST00000267199 PROK1P58294 105 aa8.63□□□□□ -1.03
VPS33A-201ENST00000267199 COX7B2Q8TF08 81 aa8.63□□□□□ -1.03
VPS33A-201ENST00000267199 CCL24O00175 119 aa8.63□□□□□ -1.03
VPS33A-201ENST00000267199 RNASE3P12724 160 aaKnown RBP8.63□□□□□ -1.03
VPS33A-201ENST00000267199 COX7A2LO14548 114 aa8.62□□□□□ -1.03
VPS33A-201ENST00000267199 PIK3CD-AS1Q5SR53 167 aa8.62□□□□□ -1.03
VPS33A-201ENST00000267199 LINC00467Q9BRT7 94 aa8.62□□□□□ -1.03
VPS33A-201ENST00000267199 RAI1Q7Z5J4 1906 aaPredicted RBP8.62□□□□□ -1.03
VPS33A-201ENST00000267199 TRAV23DV6A0A075B6W5 121 aa8.61□□□□□ -1.03
VPS33A-201ENST00000267199 M0QY20 66 aa8.61□□□□□ -1.03
VPS33A-201ENST00000267199 CNFNQ9BYD5 112 aa8.61□□□□□ -1.03
VPS33A-201ENST00000267199 TRBV30A0A0K0K1B3 111 aa8.61□□□□□ -1.03
VPS33A-201ENST00000267199 hADV29S1A0JD25 119 aa8.61□□□□□ -1.03
VPS33A-201ENST00000267199 K7EQD1 137 aa8.61□□□□□ -1.03
VPS33A-201ENST00000267199 C10orf99Q6UWK7 81 aa8.61□□□□□ -1.03
VPS33A-201ENST00000267199 PTPRBP23467 1997 aa8.61□□□□□ -1.03
VPS33A-201ENST00000267199 CLPSL1A2RUU4 121 aa8.61□□□□□ -1.03
VPS33A-201ENST00000267199 MRGPRG-AS1Q2M3A8 158 aa8.61□□□□□ -1.03
VPS33A-201ENST00000267199 ESM1Q9NQ30 184 aa8.61□□□□□ -1.03
VPS33A-201ENST00000267199 ZNF561-AS1K7EIQ3 104 aa8.6□□□□□ -1.03
VPS33A-201ENST00000267199 UQCRQO14949 82 aa8.6□□□□□ -1.03
VPS33A-201ENST00000267199 F8W735 103 aaPredicted RBP8.6□□□□□ -1.03
VPS33A-201ENST00000267199 K7EQG2 157 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms