RNA–Protein interactions for RNA: ENST00000266079.4

PRPF6-201, Transcript of pre-mRNA processing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF6, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF6-201ENST00000266079 RAX2Q96IS3 184 aa9.39□□□□□ -0.91
PRPF6-201ENST00000266079 TRAV8-2A0A0B4J237 113 aa9.39□□□□□ -0.91
PRPF6-201ENST00000266079 TRBV7-9A0A0J9YWB2 115 aa9.39□□□□□ -0.91
PRPF6-201ENST00000266079 HERVK_113P61574 105 aa9.38□□□□□ -0.91
PRPF6-201ENST00000266079 ANXA2RQ3ZCQ2 193 aa9.38□□□□□ -0.91
PRPF6-201ENST00000266079 Q6ZQT7 251 aa9.38□□□□□ -0.91
PRPF6-201ENST00000266079 C4orf3Q8WVX3 66 aa9.38□□□□□ -0.91
PRPF6-201ENST00000266079 RPL39LQ96EH5 51 aaKnown RBP9.38□□□□□ -0.91
PRPF6-201ENST00000266079 FAM110AQ9BQ89 295 aa9.38□□□□□ -0.91
PRPF6-201ENST00000266079 TRAV4A0A0B4J268 109 aa9.38□□□□□ -0.91
PRPF6-201ENST00000266079 C11orf86A6NJI1 115 aa9.38□□□□□ -0.91
PRPF6-201ENST00000266079 C9JAW5 83 aa9.38□□□□□ -0.91
PRPF6-201ENST00000266079 NDUFA4O00483 81 aa9.38□□□□□ -0.91
PRPF6-201ENST00000266079 SLC25A29Q8N8R3 303 aa9.38□□□□□ -0.91
PRPF6-201ENST00000266079 CCDC179H3BU77 68 aa9.37□□□□□ -0.91
PRPF6-201ENST00000266079 BUB3O43684 328 aa9.37□□□□□ -0.91
PRPF6-201ENST00000266079 CRYGDP07320 174 aa9.37□□□□□ -0.91
PRPF6-201ENST00000266079 CCL24O00175 119 aa9.37□□□□□ -0.91
PRPF6-201ENST00000266079 TTC32Q5I0X7 151 aa9.37□□□□□ -0.91
PRPF6-201ENST00000266079 PAPPA-AS1Q5QFB9 102 aa9.37□□□□□ -0.91
PRPF6-201ENST00000266079 Q6Q795 121 aa9.37□□□□□ -0.91
PRPF6-201ENST00000266079 IGLV4-69A0A075B6H9 119 aa9.37□□□□□ -0.91
PRPF6-201ENST00000266079 IFITM1P13164 125 aa9.37□□□□□ -0.91
PRPF6-201ENST00000266079 SHISA2Q6UWI4 295 aa9.37□□□□□ -0.91
PRPF6-201ENST00000266079 RHPN1-AS1Q9BWJ2 59 aa9.37□□□□□ -0.91
PRPF6-201ENST00000266079 DAZ1Q9NQZ3 744 aaKnown RBP9.37□□□□□ -0.91
PRPF6-201ENST00000266079 DPH3P1Q9H4G8 78 aa9.36□□□□□ -0.91
PRPF6-201ENST00000266079 M0R381 172 aa9.35□□□□□ -0.91
PRPF6-201ENST00000266079 DUSP14O95147 198 aaKnown RBP9.35□□□□□ -0.91
PRPF6-201ENST00000266079 HERV-K104P63124 156 aa9.35□□□□□ -0.91
PRPF6-201ENST00000266079 C9orf47Q6ZRZ4 202 aa9.35□□□□□ -0.91
PRPF6-201ENST00000266079 TRPT1Q86TN4 253 aaKnown RBP9.35□□□□□ -0.91
PRPF6-201ENST00000266079 ADARB2-AS1A8MUL3 147 aa9.35□□□□□ -0.91
PRPF6-201ENST00000266079 MRPL53Q96EL3 112 aaKnown RBP9.35□□□□□ -0.91
PRPF6-201ENST00000266079 NOTCH1P46531 2555 aa9.35□□□□□ -0.91
PRPF6-201ENST00000266079 TSPEAR-AS2P59090 65 aa9.34□□□□□ -0.91
PRPF6-201ENST00000266079 GPHB5Q86YW7 130 aa9.34□□□□□ -0.91
PRPF6-201ENST00000266079 Q8N1Y9 231 aa9.34□□□□□ -0.91
PRPF6-201ENST00000266079 TSHBP01222 138 aa9.34□□□□□ -0.91
PRPF6-201ENST00000266079 EMP1P54849 157 aa9.34□□□□□ -0.91
PRPF6-201ENST00000266079 RPL32P62910 135 aaKnown RBP9.34□□□□□ -0.91
PRPF6-201ENST00000266079 NTN5Q8WTR8 489 aaPredicted RBP9.34□□□□□ -0.91
PRPF6-201ENST00000266079 IGHV3-33P01772 117 aa9.34□□□□□ -0.91
PRPF6-201ENST00000266079 SMIM20Q8N5G0 67 aa9.34□□□□□ -0.91
PRPF6-201ENST00000266079 C14orf178Q8N769 122 aaPredicted RBP9.34□□□□□ -0.91
PRPF6-201ENST00000266079 PRR9Q5T870 116 aa9.33□□□□□ -0.92
PRPF6-201ENST00000266079 SPATA3Q8NHX4 192 aa9.33□□□□□ -0.92
PRPF6-201ENST00000266079 SPRY2O43597 315 aa9.33□□□□□ -0.92
PRPF6-201ENST00000266079 PF4P02776 101 aa9.33□□□□□ -0.92
PRPF6-201ENST00000266079 MGPP08493 103 aa9.33□□□□□ -0.92
PRPF6-201ENST00000266079 P0DMU3 169 aa9.33□□□□□ -0.92
PRPF6-201ENST00000266079 FAM231AP0DMU4 169 aa9.33□□□□□ -0.92
PRPF6-201ENST00000266079 FAM231CP0DMU5 169 aa9.33□□□□□ -0.92
PRPF6-201ENST00000266079 PMVKQ15126 192 aa9.33□□□□□ -0.92
PRPF6-201ENST00000266079 AMELXQ99217 191 aa9.33□□□□□ -0.92
PRPF6-201ENST00000266079 A4D1N5 150 aa9.32□□□□□ -0.92
PRPF6-201ENST00000266079 DEFB1P60022 68 aa9.32□□□□□ -0.92
PRPF6-201ENST00000266079 MGAM2Q2M2H8 2515 aa9.32□□□□□ -0.92
PRPF6-201ENST00000266079 EIF4EBP3O60516 100 aaPredicted RBP9.32□□□□□ -0.92
PRPF6-201ENST00000266079 PPP1R17O96001 155 aa9.32□□□□□ -0.92
PRPF6-201ENST00000266079 TMEM263Q8WUH6 116 aaKnown RBP9.32□□□□□ -0.92
PRPF6-201ENST00000266079 LINC01600Q96MT4 127 aa9.32□□□□□ -0.92
PRPF6-201ENST00000266079 ODF3Q96PU9 254 aa9.32□□□□□ -0.92
PRPF6-201ENST00000266079 IGIPA6NJ69 53 aa9.31□□□□□ -0.92
PRPF6-201ENST00000266079 SPANXA1Q9NS26 97 aa9.31□□□□□ -0.92
PRPF6-201ENST00000266079 TP53TG1Q9Y2A0 90 aa9.31□□□□□ -0.92
PRPF6-201ENST00000266079 TRAV8-4A0A0B4J246 113 aa9.31□□□□□ -0.92
PRPF6-201ENST00000266079 J3QQQ9 107 aa9.31□□□□□ -0.92
PRPF6-201ENST00000266079 S100A4P26447 101 aaKnown RBP9.31□□□□□ -0.92
PRPF6-201ENST00000266079 LINC01620Q4KN68 170 aa9.31□□□□□ -0.92
PRPF6-201ENST00000266079 TMEM170BQ5T4T1 132 aa9.31□□□□□ -0.92
PRPF6-201ENST00000266079 FAM159AQ6UWV7 190 aa9.31□□□□□ -0.92
PRPF6-201ENST00000266079 C15orf53Q8NAA6 179 aa9.31□□□□□ -0.92
PRPF6-201ENST00000266079 RPL13AP40429 203 aaKnown RBP9.31□□□□□ -0.92
PRPF6-201ENST00000266079 C3orf56Q8N813 242 aa9.31□□□□□ -0.92
PRPF6-201ENST00000266079 PHLDA3Q9Y5J5 127 aa9.31□□□□□ -0.92
PRPF6-201ENST00000266079 A0A0B4J2C4 111 aa9.3□□□□□ -0.92
PRPF6-201ENST00000266079 ATXN8Q156A1 80 aa9.3□□□□□ -0.92
PRPF6-201ENST00000266079 LENEPQ9Y5L5 61 aa9.3□□□□□ -0.92
PRPF6-201ENST00000266079 U3KQE9 123 aa9.3□□□□□ -0.92
PRPF6-201ENST00000266079 OVOL1O14753 267 aa9.3□□□□□ -0.92
PRPF6-201ENST00000266079 LGALS3P17931 250 aaKnown RBP9.3□□□□□ -0.92
PRPF6-201ENST00000266079 DYNLRB2Q8TF09 96 aa9.3□□□□□ -0.92
PRPF6-201ENST00000266079 TMEM141Q96I45 108 aa9.3□□□□□ -0.92
PRPF6-201ENST00000266079 H7C2G1 150 aa9.29□□□□□ -0.92
PRPF6-201ENST00000266079 ZNRF2Q8NHG8 242 aa9.29□□□□□ -0.92
PRPF6-201ENST00000266079 TEX49A0A1B0GTD5 131 aa9.29□□□□□ -0.92
PRPF6-201ENST00000266079 J3KRW8 73 aa9.29□□□□□ -0.92
PRPF6-201ENST00000266079 OR10J6PQ8NGY7 276 aa9.29□□□□□ -0.92
PRPF6-201ENST00000266079 C16orf92Q96LL3 132 aa9.29□□□□□ -0.92
PRPF6-201ENST00000266079 TIMM17AQ99595 171 aa9.29□□□□□ -0.92
PRPF6-201ENST00000266079 TRAV21A0A0B4J279 112 aa9.28□□□□□ -0.92
PRPF6-201ENST00000266079 TRBV10-2A0A0K0K1G8 114 aa9.28□□□□□ -0.92
PRPF6-201ENST00000266079 PEMTQ9UBM1 199 aa9.28□□□□□ -0.92
PRPF6-201ENST00000266079 K7EMT4 169 aa9.28□□□□□ -0.92
PRPF6-201ENST00000266079 MED14OSP0DP75 135 aa9.28□□□□□ -0.92
PRPF6-201ENST00000266079 ZNF876PQ49A33 203 aa9.28□□□□□ -0.92
PRPF6-201ENST00000266079 POM121L12Q8N7R1 296 aa9.28□□□□□ -0.92
PRPF6-201ENST00000266079 TRAV2A0A0B4J234 112 aa9.27□□□□□ -0.93
PRPF6-201ENST00000266079 LGALS9O00182 355 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 151.9 ms