RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 CFAP126Q5VTH2 177 aa10.62□□□□□ -0.71
PDLIM2-201ENST00000265810 TRBV10-1A0A0K0K1A3 114 aa10.62□□□□□ -0.71
PDLIM2-201ENST00000265810 NPSP0C0P6 89 aa10.62□□□□□ -0.71
PDLIM2-201ENST00000265810 A0A0J9YXV3 536 aa10.61□□□□□ -0.71
PDLIM2-201ENST00000265810 ZZEF1O43149 2961 aa10.61□□□□□ -0.71
PDLIM2-201ENST00000265810 PSCAO43653 123 aa10.61□□□□□ -0.71
PDLIM2-201ENST00000265810 FGF6P10767 208 aa10.61□□□□□ -0.71
PDLIM2-201ENST00000265810 UNC79Q9P2D8 2635 aa10.6□□□□□ -0.71
PDLIM2-201ENST00000265810 AMTNQ6UX39 209 aa10.6□□□□□ -0.71
PDLIM2-201ENST00000265810 H3BUT2 72 aa10.6□□□□□ -0.71
PDLIM2-201ENST00000265810 C20orf203Q8NBC4 194 aa10.6□□□□□ -0.71
PDLIM2-201ENST00000265810 TOMM6Q96B49 74 aa10.6□□□□□ -0.71
PDLIM2-201ENST00000265810 M0QY20 66 aa10.6□□□□□ -0.71
PDLIM2-201ENST00000265810 SPINK8P0C7L1 97 aa10.6□□□□□ -0.71
PDLIM2-201ENST00000265810 XCL1P47992 114 aa10.6□□□□□ -0.71
PDLIM2-201ENST00000265810 C9orf85Q96MD7 179 aa10.6□□□□□ -0.71
PDLIM2-201ENST00000265810 GAS8-AS1O95177 125 aa10.6□□□□□ -0.71
PDLIM2-201ENST00000265810 HERVK_113P63121 156 aa10.6□□□□□ -0.71
PDLIM2-201ENST00000265810 LINC01545Q5VT33 79 aa10.6□□□□□ -0.71
PDLIM2-201ENST00000265810 KALRNO60229 2985 aa10.6□□□□□ -0.71
PDLIM2-201ENST00000265810 IGHV4-30-4P0DP06 118 aa10.59□□□□□ -0.71
PDLIM2-201ENST00000265810 OPRPNQ99935 248 aaPredicted RBP10.59□□□□□ -0.71
PDLIM2-201ENST00000265810 NBEAQ8NFP9 2946 aa10.59□□□□□ -0.71
PDLIM2-201ENST00000265810 TRAV26-1A0A087WT03 109 aa10.59□□□□□ -0.71
PDLIM2-201ENST00000265810 LYRM9A8MSI8 78 aa10.59□□□□□ -0.71
PDLIM2-201ENST00000265810 COX8AP10176 69 aa10.59□□□□□ -0.71
PDLIM2-201ENST00000265810 CEMP1Q6PRD7 247 aaPredicted RBP10.59□□□□□ -0.71
PDLIM2-201ENST00000265810 COX8CQ7Z4L0 72 aa10.59□□□□□ -0.71
PDLIM2-201ENST00000265810 UBE2WQ96B02 151 aa10.59□□□□□ -0.71
PDLIM2-201ENST00000265810 KLK9Q2XQG4 91 aa10.58□□□□□ -0.72
PDLIM2-201ENST00000265810 MRPL52Q86TS9 123 aaKnown RBP10.58□□□□□ -0.72
PDLIM2-201ENST00000265810 CNFNQ9BYD5 112 aa10.58□□□□□ -0.72
PDLIM2-201ENST00000265810 MIFP14174 115 aa10.58□□□□□ -0.72
PDLIM2-201ENST00000265810 SLC25A29Q8N8R3 303 aa10.58□□□□□ -0.72
PDLIM2-201ENST00000265810 C11orf45Q8TAV5 145 aa10.58□□□□□ -0.72
PDLIM2-201ENST00000265810 NDUFA12Q9UI09 145 aa10.58□□□□□ -0.72
PDLIM2-201ENST00000265810 DMDP11532 3685 aa10.58□□□□□ -0.72
PDLIM2-201ENST00000265810 CRYGDP07320 174 aa10.58□□□□□ -0.72
PDLIM2-201ENST00000265810 BAALCQ8WXS3 180 aa10.58□□□□□ -0.72
PDLIM2-201ENST00000265810 VSIG2Q96IQ7 327 aa10.58□□□□□ -0.72
PDLIM2-201ENST00000265810 IGHV4-28A0A0C4DH34 117 aa10.57□□□□□ -0.72
PDLIM2-201ENST00000265810 KIR2DL5BA0A0G2JN68 375 aa10.57□□□□□ -0.72
PDLIM2-201ENST00000265810 KIR2DL5BA0A0G2JPC4 375 aa10.57□□□□□ -0.72
PDLIM2-201ENST00000265810 J3QQQ9 107 aa10.57□□□□□ -0.72
PDLIM2-201ENST00000265810 KIR2DL5AQ8N109 375 aa10.57□□□□□ -0.72
PDLIM2-201ENST00000265810 KIR2DL5BQ8NHK3 375 aa10.57□□□□□ -0.72
PDLIM2-201ENST00000265810 IGHV4-4A0A075B6R2 117 aa10.57□□□□□ -0.72
PDLIM2-201ENST00000265810 NAA38Q9BRA0 125 aaKnown RBP10.57□□□□□ -0.72
PDLIM2-201ENST00000265810 IGLV10-54A0A075B6I4 117 aa10.57□□□□□ -0.72
PDLIM2-201ENST00000265810 SH2D6Q7Z4S9 175 aa10.57□□□□□ -0.72
PDLIM2-201ENST00000265810 C5orf38Q86SI9 138 aa10.57□□□□□ -0.72
PDLIM2-201ENST00000265810 NEXN-AS1Q8NBZ9 246 aa10.57□□□□□ -0.72
PDLIM2-201ENST00000265810 TIMM17AQ99595 171 aa10.57□□□□□ -0.72
PDLIM2-201ENST00000265810 U3KQK5 164 aa10.57□□□□□ -0.72
PDLIM2-201ENST00000265810 RS1O15537 224 aa10.56□□□□□ -0.72
PDLIM2-201ENST00000265810 IGHV3-30P01768 117 aa10.56□□□□□ -0.72
PDLIM2-201ENST00000265810 IGHV3-33P01772 117 aa10.56□□□□□ -0.72
PDLIM2-201ENST00000265810 IGHV3-30-3P0DP02 117 aa10.56□□□□□ -0.72
PDLIM2-201ENST00000265810 IGHV3-30-5P0DP03 117 aa10.56□□□□□ -0.72
PDLIM2-201ENST00000265810 FHL3Q13643 280 aa10.56□□□□□ -0.72
PDLIM2-201ENST00000265810 PCP2Q8IVA1 136 aa10.56□□□□□ -0.72
PDLIM2-201ENST00000265810 C1orf158Q8N1D5 194 aa10.56□□□□□ -0.72
PDLIM2-201ENST00000265810 MRPS16Q9Y3D3 137 aaKnown RBP10.56□□□□□ -0.72
PDLIM2-201ENST00000265810 PFN2P35080 140 aa10.56□□□□□ -0.72
PDLIM2-201ENST00000265810 TEP1Q99973 2627 aaKnown RBP10.56□□□□□ -0.72
PDLIM2-201ENST00000265810 ZNF561-AS1K7EIQ3 104 aa10.55□□□□□ -0.72
PDLIM2-201ENST00000265810 CST9LQ9H4G1 147 aa10.55□□□□□ -0.72
PDLIM2-201ENST00000265810 Q9HAA7 133 aa10.55□□□□□ -0.72
PDLIM2-201ENST00000265810 NRACQ8N912 160 aa10.55□□□□□ -0.72
PDLIM2-201ENST00000265810 CCL18P55774 89 aa10.54□□□□□ -0.72
PDLIM2-201ENST00000265810 SPCS1Q9Y6A9 102 aa10.54□□□□□ -0.72
PDLIM2-201ENST00000265810 ODF1Q14990 250 aa10.54□□□□□ -0.72
PDLIM2-201ENST00000265810 IGKV2D-24A0A075B6R9 120 aa10.53□□□□□ -0.72
PDLIM2-201ENST00000265810 RBMY1BA6NDE4 496 aaKnown RBP10.53□□□□□ -0.72
PDLIM2-201ENST00000265810 RBMY1EA6NEQ0 496 aaKnown RBP10.53□□□□□ -0.72
PDLIM2-201ENST00000265810 RBMY1DP0C7P1 496 aaKnown RBP10.53□□□□□ -0.72
PDLIM2-201ENST00000265810 KRTAP24-1Q3LI83 254 aa10.53□□□□□ -0.72
PDLIM2-201ENST00000265810 SPATA25Q9BR10 227 aa10.53□□□□□ -0.72
PDLIM2-201ENST00000265810 TRAV12-1A0A0B4J245 112 aa10.53□□□□□ -0.72
PDLIM2-201ENST00000265810 IGLL5B9A064 214 aa10.52□□□□□ -0.72
PDLIM2-201ENST00000265810 KRTAP1-1Q07627 177 aa10.52□□□□□ -0.72
PDLIM2-201ENST00000265810 DNAL4O96015 105 aa10.52□□□□□ -0.73
PDLIM2-201ENST00000265810 RBMY1A1P0DJD3 496 aaKnown RBP10.52□□□□□ -0.73
PDLIM2-201ENST00000265810 RBMY1CP0DJD4 496 aa10.52□□□□□ -0.73
PDLIM2-201ENST00000265810 TTTY13Q9BZ97 58 aa10.52□□□□□ -0.73
PDLIM2-201ENST00000265810 ERG28Q9UKR5 140 aa10.52□□□□□ -0.73
PDLIM2-201ENST00000265810 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.51□□□□□ -0.73
PDLIM2-201ENST00000265810 TRBV6-4A0A1B0GX49 114 aa10.51□□□□□ -0.73
PDLIM2-201ENST00000265810 C11orf86A6NJI1 115 aa10.51□□□□□ -0.73
PDLIM2-201ENST00000265810 K7ERU9 68 aa10.51□□□□□ -0.73
PDLIM2-201ENST00000265810 Q6ZUT4 128 aa10.51□□□□□ -0.73
PDLIM2-201ENST00000265810 LINC00467Q9BRT7 94 aa10.51□□□□□ -0.73
PDLIM2-201ENST00000265810 KLK12Q9UKR0 248 aa10.51□□□□□ -0.73
PDLIM2-201ENST00000265810 DEFB131BA0A096LNP1 70 aa10.5□□□□□ -0.73
PDLIM2-201ENST00000265810 TRBV27A0A0K0K1C4 114 aa10.5□□□□□ -0.73
PDLIM2-201ENST00000265810 NXPH4O95158 308 aa10.5□□□□□ -0.73
PDLIM2-201ENST00000265810 TRBV6-5A0A0K0K1A5 114 aa10.5□□□□□ -0.73
PDLIM2-201ENST00000265810 LOC100131303A0A0U1RQF7 123 aa10.5□□□□□ -0.73
PDLIM2-201ENST00000265810 SCRT2Q9NQ03 307 aa10.5□□□□□ -0.73
PDLIM2-201ENST00000265810 S100A7L2Q5SY68 101 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms