RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 CHCHD10Q8WYQ3 142 aaPredicted RBP13.54□□□□□ -0.24
COL5A3-201ENST00000264828 CDKN2A-AS1Q9UH64 79 aa13.54□□□□□ -0.24
COL5A3-201ENST00000264828 TMEM223A0PJW6 202 aa13.54□□□□□ -0.24
COL5A3-201ENST00000264828 UFSP1Q6NVU6 142 aa13.54□□□□□ -0.24
COL5A3-201ENST00000264828 MAPKAPK5-AS1Q8N8E1 139 aa13.54□□□□□ -0.24
COL5A3-201ENST00000264828 DENND4AQ7Z401 1863 aa13.54□□□□□ -0.24
COL5A3-201ENST00000264828 GTF3C1Q12789 2109 aa13.54□□□□□ -0.24
COL5A3-201ENST00000264828 A0A0U1RQV1 116 aa13.53□□□□□ -0.24
COL5A3-201ENST00000264828 FAM236DA0A1B0GTK5 79 aa13.53□□□□□ -0.24
COL5A3-201ENST00000264828 FAM236CP0DP71 79 aa13.53□□□□□ -0.24
COL5A3-201ENST00000264828 KLK5Q9Y337 293 aaPredicted RBP13.53□□□□□ -0.24
COL5A3-201ENST00000264828 C1orf229Q6ZS94 237 aaPredicted RBP13.53□□□□□ -0.24
COL5A3-201ENST00000264828 FAM19A1Q7Z5A9 133 aa13.53□□□□□ -0.24
COL5A3-201ENST00000264828 LRCOL1A6NCL2 159 aa13.52□□□□□ -0.24
COL5A3-201ENST00000264828 P0C879 139 aa13.52□□□□□ -0.24
COL5A3-201ENST00000264828 CASC2Q6XLA1 102 aa13.52□□□□□ -0.24
COL5A3-201ENST00000264828 WFDC10BQ8IUB3 73 aa13.52□□□□□ -0.24
COL5A3-201ENST00000264828 DCANP1Q8TF63 244 aa13.52□□□□□ -0.25
COL5A3-201ENST00000264828 SPTAN1Q13813 2472 aaKnown RBP13.52□□□□□ -0.25
COL5A3-201ENST00000264828 TRIAP1O43715 76 aa13.51□□□□□ -0.25
COL5A3-201ENST00000264828 BRWD1-AS2P59051 145 aa13.51□□□□□ -0.25
COL5A3-201ENST00000264828 C11orf45Q8TAV5 145 aa13.51□□□□□ -0.25
COL5A3-201ENST00000264828 ZNF22P17026 224 aaPredicted RBP13.51□□□□□ -0.25
COL5A3-201ENST00000264828 A0A0J9YWU9 116 aa13.5□□□□□ -0.25
COL5A3-201ENST00000264828 Q6ZPA2 131 aa13.5□□□□□ -0.25
COL5A3-201ENST00000264828 IGLV4-3A0A075B6K6 122 aa13.5□□□□□ -0.25
COL5A3-201ENST00000264828 FAM222AQ5U5X8 452 aa13.5□□□□□ -0.25
COL5A3-201ENST00000264828 UQCRQO14949 82 aa13.5□□□□□ -0.25
COL5A3-201ENST00000264828 USP17L23D6RBM5 183 aa13.49□□□□□ -0.25
COL5A3-201ENST00000264828 PROK1P58294 105 aa13.49□□□□□ -0.25
COL5A3-201ENST00000264828 C3orf22Q8N5N4 141 aa13.49□□□□□ -0.25
COL5A3-201ENST00000264828 LINC00308Q8TCZ7 52 aa13.49□□□□□ -0.25
COL5A3-201ENST00000264828 ZNF295-AS1Q8N0V1 137 aa13.49□□□□□ -0.25
COL5A3-201ENST00000264828 ODF3BA8MYP8 253 aa13.48□□□□□ -0.25
COL5A3-201ENST00000264828 FAM19A5Q7Z5A7 132 aaPredicted RBP13.48□□□□□ -0.25
COL5A3-201ENST00000264828 SHANK1Q9Y566 2161 aa13.48□□□□□ -0.25
COL5A3-201ENST00000264828 ZGRF1Q86YA3 2104 aa13.48□□□□□ -0.25
COL5A3-201ENST00000264828 C19orf84I3L1E1 186 aa13.47□□□□□ -0.25
COL5A3-201ENST00000264828 CRYGDP07320 174 aa13.47□□□□□ -0.25
COL5A3-201ENST00000264828 XAGE1AQ9HD64 81 aa13.47□□□□□ -0.25
COL5A3-201ENST00000264828 A8MZ25 164 aa13.47□□□□□ -0.25
COL5A3-201ENST00000264828 A0A087WZ39 114 aa13.46□□□□□ -0.25
COL5A3-201ENST00000264828 CRIP1P50238 77 aa13.46□□□□□ -0.26
COL5A3-201ENST00000264828 MBD6Q96DN6 1003 aa13.46□□□□□ -0.26
COL5A3-201ENST00000264828 FBXL19-AS1Q494R0 122 aa13.46□□□□□ -0.26
COL5A3-201ENST00000264828 C3orf84H3BNL1 204 aa13.45□□□□□ -0.26
COL5A3-201ENST00000264828 MRPS12O15235 138 aaKnown RBP13.45□□□□□ -0.26
COL5A3-201ENST00000264828 CFAP126Q5VTH2 177 aa13.44□□□□□ -0.26
COL5A3-201ENST00000264828 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.44□□□□□ -0.26
COL5A3-201ENST00000264828 RNF185Q96GF1 192 aa13.44□□□□□ -0.26
COL5A3-201ENST00000264828 GPR179Q6PRD1 2367 aa13.44□□□□□ -0.26
COL5A3-201ENST00000264828 ODF3Q96PU9 254 aa13.44□□□□□ -0.26
COL5A3-201ENST00000264828 NDUFC2-KCTD14E9PQ53 114 aa13.43□□□□□ -0.26
COL5A3-201ENST00000264828 C1orf158Q8N1D5 194 aa13.43□□□□□ -0.26
COL5A3-201ENST00000264828 SNURFQ9Y675 71 aa13.43□□□□□ -0.26
COL5A3-201ENST00000264828 PCNX1Q96RV3 2341 aa13.43□□□□□ -0.26
COL5A3-201ENST00000264828 INSL3P51460 131 aa13.43□□□□□ -0.26
COL5A3-201ENST00000264828 NUP210LQ5VU65 1888 aa13.42□□□□□ -0.26
COL5A3-201ENST00000264828 K7EQG2 157 aa13.42□□□□□ -0.26
COL5A3-201ENST00000264828 TNFRSF13BO14836 293 aaPredicted RBP13.42□□□□□ -0.26
COL5A3-201ENST00000264828 PRO3102Q9H379 93 aa13.42□□□□□ -0.26
COL5A3-201ENST00000264828 DSCAML1Q8TD84 2053 aa13.42□□□□□ -0.26
COL5A3-201ENST00000264828 DEFB114Q30KQ6 69 aa13.41□□□□□ -0.26
COL5A3-201ENST00000264828 C14orf177Q52M58 125 aa13.41□□□□□ -0.26
COL5A3-201ENST00000264828 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.41□□□□□ -0.26
COL5A3-201ENST00000264828 M0QY20 66 aa13.41□□□□□ -0.26
COL5A3-201ENST00000264828 LMO4P61968 165 aa13.41□□□□□ -0.26
COL5A3-201ENST00000264828 LINC00482Q8N8I6 264 aa13.41□□□□□ -0.26
COL5A3-201ENST00000264828 C6orf99Q4VX62 202 aa13.41□□□□□ -0.26
COL5A3-201ENST00000264828 FAM240AA0A1B0GVK7 77 aa13.4□□□□□ -0.26
COL5A3-201ENST00000264828 IBA57-AS1B1ANH7 110 aa13.4□□□□□ -0.26
COL5A3-201ENST00000264828 Q8N976 141 aa13.4□□□□□ -0.26
COL5A3-201ENST00000264828 TRBV30A0A0K0K1B3 111 aa13.4□□□□□ -0.26
COL5A3-201ENST00000264828 MRPL55Q7Z7F7 128 aaKnown RBP13.4□□□□□ -0.26
COL5A3-201ENST00000264828 CCKP06307 115 aa13.4□□□□□ -0.26
COL5A3-201ENST00000264828 PLCE1Q9P212 2302 aa13.4□□□□□ -0.27
COL5A3-201ENST00000264828 IGKV2-28A0A075B6P5 120 aa13.39□□□□□ -0.27
COL5A3-201ENST00000264828 IGKV2D-28P01615 120 aa13.39□□□□□ -0.27
COL5A3-201ENST00000264828 DEFB131BA0A096LNP1 70 aa13.39□□□□□ -0.27
COL5A3-201ENST00000264828 H7C423 109 aa13.39□□□□□ -0.27
COL5A3-201ENST00000264828 C10orf99Q6UWK7 81 aa13.39□□□□□ -0.27
COL5A3-201ENST00000264828 U3KQK5 164 aa13.39□□□□□ -0.27
COL5A3-201ENST00000264828 LYRM9A8MSI8 78 aa13.39□□□□□ -0.27
COL5A3-201ENST00000264828 ATP5EP2Q5VTU8 51 aa13.39□□□□□ -0.27
COL5A3-201ENST00000264828 LINC00526Q96FQ7 95 aa13.39□□□□□ -0.27
COL5A3-201ENST00000264828 TRBV6-8A0A0A6YYG3 113 aa13.38□□□□□ -0.27
COL5A3-201ENST00000264828 EIF4EBP1Q13541 118 aaPredicted RBP13.38□□□□□ -0.27
COL5A3-201ENST00000264828 HRCT1Q6UXD1 115 aa13.38□□□□□ -0.27
COL5A3-201ENST00000264828 Q6YL49 198 aa13.38□□□□□ -0.27
COL5A3-201ENST00000264828 NBASA2RRP1 2371 aa13.38□□□□□ -0.27
COL5A3-201ENST00000264828 CRIP3Q6Q6R5 217 aa13.38□□□□□ -0.27
COL5A3-201ENST00000264828 LRRC75A-AS1Q8N1F1 130 aa13.37□□□□□ -0.27
COL5A3-201ENST00000264828 IGHV4-31P0DP07 118 aa13.37□□□□□ -0.27
COL5A3-201ENST00000264828 PPDPFQ9H3Y8 114 aa13.37□□□□□ -0.27
COL5A3-201ENST00000264828 ZFAND3Q9H8U3 227 aa13.37□□□□□ -0.27
COL5A3-201ENST00000264828 LINC00574Q9H8X3 128 aa13.37□□□□□ -0.27
COL5A3-201ENST00000264828 PRR4Q16378 134 aa13.37□□□□□ -0.27
COL5A3-201ENST00000264828 RIF1Q5UIP0 2472 aaKnown RBP13.37□□□□□ -0.27
COL5A3-201ENST00000264828 C22orf34Q6ZV56 151 aa13.36□□□□□ -0.27
COL5A3-201ENST00000264828 MUC22E2RYF6 1773 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms