RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 IGKV2-29A2NJV5 120 aaPredicted RBP12.8□□□□□ -0.36
TRAM1-201ENST00000262213 SNCGO76070 127 aa12.8□□□□□ -0.36
TRAM1-201ENST00000262213 TNFRSF18Q9Y5U5 241 aa12.8□□□□□ -0.36
TRAM1-201ENST00000262213 USP9YO00507 2555 aaPredicted RBP12.8□□□□□ -0.36
TRAM1-201ENST00000262213 CLEC2BQ92478 149 aa12.8□□□□□ -0.36
TRAM1-201ENST00000262213 FAM104AQ969W3 186 aa12.8□□□□□ -0.36
TRAM1-201ENST00000262213 LITAFQ99732 161 aa12.79□□□□□ -0.36
TRAM1-201ENST00000262213 ODF3Q96PU9 254 aa12.79□□□□□ -0.36
TRAM1-201ENST00000262213 TRGV11A0A075B6L2 103 aa12.78□□□□□ -0.36
TRAM1-201ENST00000262213 GAGE2BQ13066 116 aa12.78□□□□□ -0.36
TRAM1-201ENST00000262213 GAGE2EQ4V326 116 aa12.78□□□□□ -0.36
TRAM1-201ENST00000262213 C2orf82Q6UX34 121 aa12.78□□□□□ -0.36
TRAM1-201ENST00000262213 Q6ZSN1 163 aa12.78□□□□□ -0.36
TRAM1-201ENST00000262213 GAGE2DQ9UEU5 116 aa12.78□□□□□ -0.36
TRAM1-201ENST00000262213 SS18L2Q9UHA2 77 aa12.78□□□□□ -0.36
TRAM1-201ENST00000262213 ICOSQ9Y6W8 199 aa12.78□□□□□ -0.36
TRAM1-201ENST00000262213 TRAV8-4A0A0B4J246 113 aa12.77□□□□□ -0.36
TRAM1-201ENST00000262213 DEFB112Q30KQ8 113 aa12.77□□□□□ -0.36
TRAM1-201ENST00000262213 CITED1Q99966 193 aa12.77□□□□□ -0.36
TRAM1-201ENST00000262213 ITPR1Q14643 2758 aa12.77□□□□□ -0.37
TRAM1-201ENST00000262213 NOTCH3Q9UM47 2321 aa12.77□□□□□ -0.37
TRAM1-201ENST00000262213 IGHV1-58A0A0C4DH39 117 aa12.76□□□□□ -0.37
TRAM1-201ENST00000262213 DUX3Q96PT4 197 aa12.76□□□□□ -0.37
TRAM1-201ENST00000262213 TRBV10-2A0A0K0K1G8 114 aa12.76□□□□□ -0.37
TRAM1-201ENST00000262213 A0A0U1RRA0 63 aa12.76□□□□□ -0.37
TRAM1-201ENST00000262213 H3BMM0 161 aa12.76□□□□□ -0.37
TRAM1-201ENST00000262213 MRPS36P82909 103 aaKnown RBP12.76□□□□□ -0.37
TRAM1-201ENST00000262213 UBE2WQ96B02 151 aa12.76□□□□□ -0.37
TRAM1-201ENST00000262213 TRBV30A0A0K0K1B3 111 aa12.75□□□□□ -0.37
TRAM1-201ENST00000262213 DEFB131AP59861 70 aa12.75□□□□□ -0.37
TRAM1-201ENST00000262213 NRGNQ92686 78 aa12.75□□□□□ -0.37
TRAM1-201ENST00000262213 ZANQ9Y493 2812 aa12.75□□□□□ -0.37
TRAM1-201ENST00000262213 B5MCH6 92 aa12.75□□□□□ -0.37
TRAM1-201ENST00000262213 HOXD3P31249 432 aaPredicted RBP12.75□□□□□ -0.37
TRAM1-201ENST00000262213 DEFB136Q30KP8 78 aa12.75□□□□□ -0.37
TRAM1-201ENST00000262213 MAPK1IP1LQ8NDC0 245 aa12.75□□□□□ -0.37
TRAM1-201ENST00000262213 POLQO75417 2590 aa12.74□□□□□ -0.37
TRAM1-201ENST00000262213 UTP20O75691 2785 aaKnown RBP12.74□□□□□ -0.37
TRAM1-201ENST00000262213 H7C423 109 aa12.74□□□□□ -0.37
TRAM1-201ENST00000262213 VSIG2Q96IQ7 327 aa12.74□□□□□ -0.37
TRAM1-201ENST00000262213 C15orf53Q8NAA6 179 aa12.73□□□□□ -0.37
TRAM1-201ENST00000262213 ZNF625Q96I27 306 aaPredicted RBP12.73□□□□□ -0.37
TRAM1-201ENST00000262213 LINC00467Q9BRT7 94 aa12.73□□□□□ -0.37
TRAM1-201ENST00000262213 PYGO1Q9Y3Y4 419 aa12.73□□□□□ -0.37
TRAM1-201ENST00000262213 CSMD2Q7Z408 3487 aa12.73□□□□□ -0.37
TRAM1-201ENST00000262213 RPL13AP40429 203 aaKnown RBP12.73□□□□□ -0.37
TRAM1-201ENST00000262213 MIAQ16674 131 aa12.73□□□□□ -0.37
TRAM1-201ENST00000262213 TTC32Q5I0X7 151 aa12.73□□□□□ -0.37
TRAM1-201ENST00000262213 HIST2H2BDQ6DRA6 164 aa12.73□□□□□ -0.37
TRAM1-201ENST00000262213 NHLRC4P0CG21 123 aaPredicted RBP12.72□□□□□ -0.37
TRAM1-201ENST00000262213 M0QXV9 152 aa12.72□□□□□ -0.37
TRAM1-201ENST00000262213 COX6CP09669 75 aa12.72□□□□□ -0.37
TRAM1-201ENST00000262213 CHCHD7Q9BUK0 85 aa12.72□□□□□ -0.37
TRAM1-201ENST00000262213 C18orf65Q6ZTR6 163 aa12.71□□□□□ -0.37
TRAM1-201ENST00000262213 FLNCQ14315 2725 aa12.71□□□□□ -0.37
TRAM1-201ENST00000262213 CDKN2A-AS1Q9UH64 79 aa12.71□□□□□ -0.38
TRAM1-201ENST00000262213 UBE2D4Q9Y2X8 147 aa12.71□□□□□ -0.38
TRAM1-201ENST00000262213 C2CD3Q4AC94 2353 aa12.71□□□□□ -0.38
TRAM1-201ENST00000262213 SLURP1P55000 103 aa12.7□□□□□ -0.38
TRAM1-201ENST00000262213 NDUFV3P56181 108 aaKnown RBP12.7□□□□□ -0.38
TRAM1-201ENST00000262213 B4DSR2 109 aa12.7□□□□□ -0.38
TRAM1-201ENST00000262213 TINCRA0A1B0GVN0 87 aa12.69□□□□□ -0.38
TRAM1-201ENST00000262213 RBMY1BA6NDE4 496 aaKnown RBP12.69□□□□□ -0.38
TRAM1-201ENST00000262213 RBMY1EA6NEQ0 496 aaKnown RBP12.69□□□□□ -0.38
TRAM1-201ENST00000262213 RBMY1DP0C7P1 496 aaKnown RBP12.69□□□□□ -0.38
TRAM1-201ENST00000262213 SPANXDQ9BXN6 97 aa12.69□□□□□ -0.38
TRAM1-201ENST00000262213 SPANXCQ9NY87 97 aa12.69□□□□□ -0.38
TRAM1-201ENST00000262213 CUBNO60494 3623 aa12.69□□□□□ -0.38
TRAM1-201ENST00000262213 GAGE5Q13069 117 aa12.69□□□□□ -0.38
TRAM1-201ENST00000262213 GAGE6Q13070 117 aa12.69□□□□□ -0.38
TRAM1-201ENST00000262213 CENPEQ02224 2701 aa12.69□□□□□ -0.38
TRAM1-201ENST00000262213 MYO9AB2RTY4 2548 aa12.69□□□□□ -0.38
TRAM1-201ENST00000262213 USP9XQ93008 2570 aaPredicted RBP12.69□□□□□ -0.38
TRAM1-201ENST00000262213 TMEM61Q8N0U2 210 aa12.68□□□□□ -0.38
TRAM1-201ENST00000262213 CCDC179H3BU77 68 aa12.68□□□□□ -0.38
TRAM1-201ENST00000262213 DGAT2L7PQ6IED9 249 aa12.68□□□□□ -0.38
TRAM1-201ENST00000262213 LINC01587Q99440 93 aa12.68□□□□□ -0.38
TRAM1-201ENST00000262213 IFITM1P13164 125 aa12.67□□□□□ -0.38
TRAM1-201ENST00000262213 WNK1Q9H4A3 2382 aa12.67□□□□□ -0.38
TRAM1-201ENST00000262213 PKD1L2Q7Z442 2459 aa12.67□□□□□ -0.38
TRAM1-201ENST00000262213 SPANXA1Q9NS26 97 aa12.67□□□□□ -0.38
TRAM1-201ENST00000262213 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.66□□□□□ -0.38
TRAM1-201ENST00000262213 IGHV3OR16-12A0A075B7B8 117 aa12.65□□□□□ -0.38
TRAM1-201ENST00000262213 COX6A2Q02221 97 aa12.65□□□□□ -0.38
TRAM1-201ENST00000262213 ZNF415Q09FC8 603 aa12.65□□□□□ -0.38
TRAM1-201ENST00000262213 NDUFA7O95182 113 aa12.65□□□□□ -0.38
TRAM1-201ENST00000262213 KHDC1LQ5JSQ8 128 aa12.65□□□□□ -0.38
TRAM1-201ENST00000262213 TMEM101Q96IK0 257 aa12.65□□□□□ -0.38
TRAM1-201ENST00000262213 YAE1D1Q9NRH1 226 aa12.65□□□□□ -0.38
TRAM1-201ENST00000262213 ANKRD17O75179 2603 aaKnown RBP12.64□□□□□ -0.39
TRAM1-201ENST00000262213 LST1O00453 97 aa12.64□□□□□ -0.39
TRAM1-201ENST00000262213 CFAP46Q8IYW2 2715 aa12.64□□□□□ -0.39
TRAM1-201ENST00000262213 Q9H8V8 135 aa12.64□□□□□ -0.39
TRAM1-201ENST00000262213 MXRA5Q9NR99 2828 aa12.63□□□□□ -0.39
TRAM1-201ENST00000262213 H3BT86 120 aa12.63□□□□□ -0.39
TRAM1-201ENST00000262213 CITED2Q99967 270 aaPredicted RBP12.62□□□□□ -0.39
TRAM1-201ENST00000262213 MYO18BQ8IUG5 2567 aa12.61□□□□□ -0.39
TRAM1-201ENST00000262213 TRAV13-1A0A0B4J241 112 aa12.61□□□□□ -0.39
TRAM1-201ENST00000262213 GAGE12JA6NER3 117 aa12.61□□□□□ -0.39
TRAM1-201ENST00000262213 GAGE7O76087 117 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms