RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 ATOX1O00244 68 aa12.22□□□□□ -0.45
SREBF1-201ENST00000261646 MSMBP08118 114 aa12.22□□□□□ -0.45
SREBF1-201ENST00000261646 LINC00643Q86TS7 51 aa12.22□□□□□ -0.45
SREBF1-201ENST00000261646 P0DMU3 169 aa12.22□□□□□ -0.45
SREBF1-201ENST00000261646 FAM231AP0DMU4 169 aa12.22□□□□□ -0.45
SREBF1-201ENST00000261646 FAM231CP0DMU5 169 aa12.22□□□□□ -0.45
SREBF1-201ENST00000261646 UBE2D1P51668 147 aa12.22□□□□□ -0.45
SREBF1-201ENST00000261646 J3KT08 172 aa12.22□□□□□ -0.45
SREBF1-201ENST00000261646 MIAQ16674 131 aa12.22□□□□□ -0.45
SREBF1-201ENST00000261646 U3KQE9 123 aa12.22□□□□□ -0.45
SREBF1-201ENST00000261646 Q9HAA7 133 aa12.21□□□□□ -0.45
SREBF1-201ENST00000261646 TMEM223A0PJW6 202 aa12.21□□□□□ -0.45
SREBF1-201ENST00000261646 DEFB130BP0DP73 79 aa12.21□□□□□ -0.45
SREBF1-201ENST00000261646 DEFB130AP0DP74 79 aa12.21□□□□□ -0.45
SREBF1-201ENST00000261646 SND1-IT1Q9HBX3 110 aa12.21□□□□□ -0.45
SREBF1-201ENST00000261646 MTORP42345 2549 aa12.21□□□□□ -0.46
SREBF1-201ENST00000261646 VSIG2Q96IQ7 327 aa12.2□□□□□ -0.46
SREBF1-201ENST00000261646 BOD1L1Q8NFC6 3051 aa12.2□□□□□ -0.46
SREBF1-201ENST00000261646 H3BUA1 57 aa12.2□□□□□ -0.46
SREBF1-201ENST00000261646 CRIP2P52943 208 aaPredicted RBP12.2□□□□□ -0.46
SREBF1-201ENST00000261646 RPL32P62910 135 aaKnown RBP12.2□□□□□ -0.46
SREBF1-201ENST00000261646 ODF3BA8MYP8 253 aa12.2□□□□□ -0.46
SREBF1-201ENST00000261646 ADORA2A-AS1P86434 159 aa12.2□□□□□ -0.46
SREBF1-201ENST00000261646 TRBV30A0A0K0K1B3 111 aa12.19□□□□□ -0.46
SREBF1-201ENST00000261646 IGLV4-3A0A075B6K6 122 aa12.19□□□□□ -0.46
SREBF1-201ENST00000261646 A8MZ25 164 aa12.18□□□□□ -0.46
SREBF1-201ENST00000261646 GHRHP01286 108 aa12.18□□□□□ -0.46
SREBF1-201ENST00000261646 C5orf38Q86SI9 138 aa12.18□□□□□ -0.46
SREBF1-201ENST00000261646 JMJD1CQ15652 2540 aa12.18□□□□□ -0.46
SREBF1-201ENST00000261646 IGHV4-38-2P0DP08 117 aa12.18□□□□□ -0.46
SREBF1-201ENST00000261646 CENPEQ02224 2701 aa12.17□□□□□ -0.46
SREBF1-201ENST00000261646 RNASE3P12724 160 aaKnown RBP12.17□□□□□ -0.46
SREBF1-201ENST00000261646 SS18Q15532 418 aa12.17□□□□□ -0.46
SREBF1-201ENST00000261646 CDIP1Q9H305 208 aa12.17□□□□□ -0.46
SREBF1-201ENST00000261646 CDKN2A-AS1Q9UH64 79 aa12.17□□□□□ -0.46
SREBF1-201ENST00000261646 NBL1P41271 181 aa12.17□□□□□ -0.46
SREBF1-201ENST00000261646 UBE2D3P61077 147 aa12.17□□□□□ -0.46
SREBF1-201ENST00000261646 UBE2D2P62837 147 aa12.17□□□□□ -0.46
SREBF1-201ENST00000261646 DAZ2Q13117 558 aaKnown RBP12.17□□□□□ -0.46
SREBF1-201ENST00000261646 RBMY1FQ15415 496 aaKnown RBP12.17□□□□□ -0.46
SREBF1-201ENST00000261646 DAZ4Q86SG3 579 aaKnown RBP12.17□□□□□ -0.46
SREBF1-201ENST00000261646 SIRPDQ9H106 197 aa12.17□□□□□ -0.46
SREBF1-201ENST00000261646 DAZ3Q9NR90 486 aaKnown RBP12.17□□□□□ -0.46
SREBF1-201ENST00000261646 CRLF1O75462 422 aa12.16□□□□□ -0.46
SREBF1-201ENST00000261646 IGF2-ASQ6U949 168 aa12.16□□□□□ -0.46
SREBF1-201ENST00000261646 DEFB136Q30KP8 78 aa12.16□□□□□ -0.46
SREBF1-201ENST00000261646 NRGNQ92686 78 aa12.16□□□□□ -0.46
SREBF1-201ENST00000261646 PTPRBP23467 1997 aa12.16□□□□□ -0.46
SREBF1-201ENST00000261646 IGHV4-4A0A075B6R2 117 aa12.16□□□□□ -0.46
SREBF1-201ENST00000261646 LECT2O14960 151 aa12.16□□□□□ -0.46
SREBF1-201ENST00000261646 PKD1L2Q7Z442 2459 aa12.16□□□□□ -0.46
SREBF1-201ENST00000261646 POLR2KP53803 58 aaKnown RBP12.15□□□□□ -0.46
SREBF1-201ENST00000261646 TRBV27A0A0K0K1C4 114 aa12.15□□□□□ -0.46
SREBF1-201ENST00000261646 UQCRQO14949 82 aa12.15□□□□□ -0.46
SREBF1-201ENST00000261646 IGHV4-59P01825 116 aa12.15□□□□□ -0.46
SREBF1-201ENST00000261646 PF4P02776 101 aa12.15□□□□□ -0.46
SREBF1-201ENST00000261646 GATA3P23771 443 aa12.15□□□□□ -0.46
SREBF1-201ENST00000261646 IGLV2-18A0A075B6J9 118 aa12.15□□□□□ -0.46
SREBF1-201ENST00000261646 A0A0J9YX75 114 aa12.15□□□□□ -0.46
SREBF1-201ENST00000261646 APRG1Q8IVJ8 170 aa12.15□□□□□ -0.46
SREBF1-201ENST00000261646 ORMDL1Q9P0S3 153 aa12.15□□□□□ -0.46
SREBF1-201ENST00000261646 M0QY20 66 aa12.15□□□□□ -0.47
SREBF1-201ENST00000261646 COX7A2LO14548 114 aa12.14□□□□□ -0.47
SREBF1-201ENST00000261646 IGHV4-61A0A0C4DH41 118 aa12.14□□□□□ -0.47
SREBF1-201ENST00000261646 CDSNQ15517 529 aa12.14□□□□□ -0.47
SREBF1-201ENST00000261646 C14orf132Q9NPU4 83 aa12.14□□□□□ -0.47
SREBF1-201ENST00000261646 FN1P02751 2386 aaKnown RBP12.14□□□□□ -0.47
SREBF1-201ENST00000261646 SPANXCQ9NY87 97 aa12.14□□□□□ -0.47
SREBF1-201ENST00000261646 H0YGX0 51 aa12.13□□□□□ -0.47
SREBF1-201ENST00000261646 TMEM263Q8WUH6 116 aaKnown RBP12.13□□□□□ -0.47
SREBF1-201ENST00000261646 ADAMTS20P59510 1910 aa12.13□□□□□ -0.47
SREBF1-201ENST00000261646 IGHV4OR15-8A0A075B7B6 117 aa12.13□□□□□ -0.47
SREBF1-201ENST00000261646 A0A087WW49 117 aa12.13□□□□□ -0.47
SREBF1-201ENST00000261646 CLPSL2Q6UWE3 100 aa12.13□□□□□ -0.47
SREBF1-201ENST00000261646 IGIPA6NJ69 53 aa12.12□□□□□ -0.47
SREBF1-201ENST00000261646 TSPEAR-AS2P59090 65 aa12.12□□□□□ -0.47
SREBF1-201ENST00000261646 NSUN5P1Q3KNT7 163 aa12.12□□□□□ -0.47
SREBF1-201ENST00000261646 MIR7-3HGQ8N6C7 128 aa12.12□□□□□ -0.47
SREBF1-201ENST00000261646 SDIM1Q6ZPB5 146 aa12.12□□□□□ -0.47
SREBF1-201ENST00000261646 COL4A2P08572 1712 aa12.12□□□□□ -0.47
SREBF1-201ENST00000261646 EBI3Q14213 229 aa12.12□□□□□ -0.47
SREBF1-201ENST00000261646 K7EMT4 169 aa12.11□□□□□ -0.47
SREBF1-201ENST00000261646 ATP5G1P05496 136 aa12.11□□□□□ -0.47
SREBF1-201ENST00000261646 MRGPRG-AS1Q2M3A8 158 aa12.11□□□□□ -0.47
SREBF1-201ENST00000261646 XCL1P47992 114 aa12.11□□□□□ -0.47
SREBF1-201ENST00000261646 H7C423 109 aa12.11□□□□□ -0.47
SREBF1-201ENST00000261646 COX8CQ7Z4L0 72 aa12.11□□□□□ -0.47
SREBF1-201ENST00000261646 NOP10Q9NPE3 64 aaKnown RBP12.11□□□□□ -0.47
SREBF1-201ENST00000261646 F8W735 103 aaPredicted RBP12.11□□□□□ -0.47
SREBF1-201ENST00000261646 IGHG2P01859 326 aa12.11□□□□□ -0.47
SREBF1-201ENST00000261646 RNF223E7ERA6 249 aa12.1□□□□□ -0.47
SREBF1-201ENST00000261646 CLPSL1A2RUU4 121 aa12.1□□□□□ -0.47
SREBF1-201ENST00000261646 RBM3P98179 157 aaKnown RBP12.1□□□□□ -0.47
SREBF1-201ENST00000261646 DEFB112Q30KQ8 113 aa12.1□□□□□ -0.47
SREBF1-201ENST00000261646 C3orf22Q8N5N4 141 aa12.1□□□□□ -0.47
SREBF1-201ENST00000261646 TNFRSF13BO14836 293 aaPredicted RBP12.1□□□□□ -0.47
SREBF1-201ENST00000261646 SMCPP49901 116 aaPredicted RBP12.1□□□□□ -0.47
SREBF1-201ENST00000261646 hADV29S1A0JD25 119 aa12.09□□□□□ -0.47
SREBF1-201ENST00000261646 LST1O00453 97 aa12.09□□□□□ -0.47
SREBF1-201ENST00000261646 PROK1P58294 105 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms