RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 NDUFA12Q9UI09 145 aa11.73□□□□□ -0.53
LMNB1-201ENST00000261366 IGHV3-38A0A0C4DH36 116 aa11.72□□□□□ -0.53
LMNB1-201ENST00000261366 TRBV6-5A0A0K0K1A5 114 aa11.72□□□□□ -0.53
LMNB1-201ENST00000261366 NSUN5P1Q3KNT7 163 aa11.72□□□□□ -0.53
LMNB1-201ENST00000261366 ZNF625Q96I27 306 aaPredicted RBP11.72□□□□□ -0.53
LMNB1-201ENST00000261366 USMG5Q96IX5 58 aa11.72□□□□□ -0.53
LMNB1-201ENST00000261366 ICOSQ9Y6W8 199 aa11.72□□□□□ -0.53
LMNB1-201ENST00000261366 UTP20O75691 2785 aaKnown RBP11.72□□□□□ -0.53
LMNB1-201ENST00000261366 CENPEQ02224 2701 aa11.72□□□□□ -0.53
LMNB1-201ENST00000261366 ACACBO00763 2458 aa11.72□□□□□ -0.53
LMNB1-201ENST00000261366 CACNA1AO00555 2505 aa11.71□□□□□ -0.53
LMNB1-201ENST00000261366 IGHV1OR15-1A0A075B7D0 117 aa11.71□□□□□ -0.53
LMNB1-201ENST00000261366 TRBV10-2A0A0K0K1G8 114 aa11.71□□□□□ -0.53
LMNB1-201ENST00000261366 H7C423 109 aa11.71□□□□□ -0.53
LMNB1-201ENST00000261366 C9orf85Q96MD7 179 aa11.71□□□□□ -0.53
LMNB1-201ENST00000261366 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.71□□□□□ -0.54
LMNB1-201ENST00000261366 IGKV2-29A2NJV5 120 aaPredicted RBP11.71□□□□□ -0.54
LMNB1-201ENST00000261366 GAGE12JA6NER3 117 aa11.71□□□□□ -0.54
LMNB1-201ENST00000261366 GAGE7O76087 117 aa11.71□□□□□ -0.54
LMNB1-201ENST00000261366 GAGE12FP0CL80 117 aa11.71□□□□□ -0.54
LMNB1-201ENST00000261366 GAGE12GP0CL81 117 aa11.71□□□□□ -0.54
LMNB1-201ENST00000261366 GAGE12IP0CL82 117 aa11.71□□□□□ -0.54
LMNB1-201ENST00000261366 GAGE4Q13068 117 aa11.71□□□□□ -0.54
LMNB1-201ENST00000261366 IGSF10Q6WRI0 2623 aa11.71□□□□□ -0.54
LMNB1-201ENST00000261366 RHOHQ15669 191 aa11.7□□□□□ -0.54
LMNB1-201ENST00000261366 IGHV4-61A0A0C4DH41 118 aa11.7□□□□□ -0.54
LMNB1-201ENST00000261366 IGHG2P01859 326 aa11.69□□□□□ -0.54
LMNB1-201ENST00000261366 LITAFQ99732 161 aa11.69□□□□□ -0.54
LMNB1-201ENST00000261366 POLQO75417 2590 aa11.69□□□□□ -0.54
LMNB1-201ENST00000261366 A0A0J9YX75 114 aa11.68□□□□□ -0.54
LMNB1-201ENST00000261366 SMIM20Q8N5G0 67 aa11.68□□□□□ -0.54
LMNB1-201ENST00000261366 MYO9AB2RTY4 2548 aa11.68□□□□□ -0.54
LMNB1-201ENST00000261366 TRBV7-9A0A0J9YWB2 115 aa11.68□□□□□ -0.54
LMNB1-201ENST00000261366 TRBV30A0A0K0K1B3 111 aa11.68□□□□□ -0.54
LMNB1-201ENST00000261366 RPL13AP40429 203 aaKnown RBP11.68□□□□□ -0.54
LMNB1-201ENST00000261366 SYNJ2BPP57105 145 aa11.68□□□□□ -0.54
LMNB1-201ENST00000261366 SNRPD3P62318 126 aaKnown RBP11.68□□□□□ -0.54
LMNB1-201ENST00000261366 ZFYVE26Q68DK2 2539 aa11.67□□□□□ -0.54
LMNB1-201ENST00000261366 COX6CP09669 75 aa11.67□□□□□ -0.54
LMNB1-201ENST00000261366 CHCHD5Q9BSY4 110 aa11.67□□□□□ -0.54
LMNB1-201ENST00000261366 MYO18BQ8IUG5 2567 aa11.67□□□□□ -0.54
LMNB1-201ENST00000261366 USP9XQ93008 2570 aaPredicted RBP11.66□□□□□ -0.54
LMNB1-201ENST00000261366 FAM104AQ969W3 186 aa11.66□□□□□ -0.54
LMNB1-201ENST00000261366 TNFRSF18Q9Y5U5 241 aa11.66□□□□□ -0.54
LMNB1-201ENST00000261366 RBMY1A1P0DJD3 496 aaKnown RBP11.65□□□□□ -0.54
LMNB1-201ENST00000261366 RBMY1CP0DJD4 496 aa11.65□□□□□ -0.54
LMNB1-201ENST00000261366 RBMY1FQ15415 496 aaKnown RBP11.65□□□□□ -0.54
LMNB1-201ENST00000261366 Q6ZSN1 163 aa11.65□□□□□ -0.54
LMNB1-201ENST00000261366 IGHV1-58A0A0C4DH39 117 aa11.65□□□□□ -0.55
LMNB1-201ENST00000261366 MIAQ16674 131 aa11.63□□□□□ -0.55
LMNB1-201ENST00000261366 TRGV11A0A075B6L2 103 aa11.63□□□□□ -0.55
LMNB1-201ENST00000261366 A6NDX4 124 aa11.63□□□□□ -0.55
LMNB1-201ENST00000261366 MRPS36P82909 103 aaKnown RBP11.63□□□□□ -0.55
LMNB1-201ENST00000261366 HIST2H2BDQ6DRA6 164 aa11.63□□□□□ -0.55
LMNB1-201ENST00000261366 VSIG2Q96IQ7 327 aa11.63□□□□□ -0.55
LMNB1-201ENST00000261366 WNK1Q9H4A3 2382 aa11.63□□□□□ -0.55
LMNB1-201ENST00000261366 IGLV1-40P01703 118 aa11.62□□□□□ -0.55
LMNB1-201ENST00000261366 MEIG1Q5JSS6 88 aa11.62□□□□□ -0.55
LMNB1-201ENST00000261366 CDKN2A-AS1Q9UH64 79 aa11.62□□□□□ -0.55
LMNB1-201ENST00000261366 SETD2Q9BYW2 2564 aaPredicted RBP11.62□□□□□ -0.55
LMNB1-201ENST00000261366 TMEM61Q8N0U2 210 aa11.61□□□□□ -0.55
LMNB1-201ENST00000261366 LINC00467Q9BRT7 94 aa11.61□□□□□ -0.55
LMNB1-201ENST00000261366 AVPP01185 164 aa11.61□□□□□ -0.55
LMNB1-201ENST00000261366 M0QXV9 152 aa11.61□□□□□ -0.55
LMNB1-201ENST00000261366 K7EQG2 157 aa11.6□□□□□ -0.55
LMNB1-201ENST00000261366 HERV-K104P63124 156 aa11.6□□□□□ -0.55
LMNB1-201ENST00000261366 NDUFA7O95182 113 aa11.6□□□□□ -0.55
LMNB1-201ENST00000261366 IGHV4-59P01825 116 aa11.6□□□□□ -0.55
LMNB1-201ENST00000261366 DOPEY1Q5JWR5 2465 aa11.59□□□□□ -0.55
LMNB1-201ENST00000261366 H3BUA1 57 aa11.59□□□□□ -0.55
LMNB1-201ENST00000261366 LST1O00453 97 aa11.59□□□□□ -0.55
LMNB1-201ENST00000261366 TLN2Q9Y4G6 2542 aa11.59□□□□□ -0.55
LMNB1-201ENST00000261366 DEFB136Q30KP8 78 aa11.59□□□□□ -0.55
LMNB1-201ENST00000261366 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.59□□□□□ -0.55
LMNB1-201ENST00000261366 K7EMT4 169 aa11.58□□□□□ -0.56
LMNB1-201ENST00000261366 DEFB131AP59861 70 aa11.58□□□□□ -0.56
LMNB1-201ENST00000261366 DGAT2L7PQ6IED9 249 aa11.58□□□□□ -0.56
LMNB1-201ENST00000261366 CCL19Q99731 98 aa11.58□□□□□ -0.56
LMNB1-201ENST00000261366 MXRA5Q9NR99 2828 aa11.58□□□□□ -0.56
LMNB1-201ENST00000261366 SPANXDQ9BXN6 97 aa11.58□□□□□ -0.56
LMNB1-201ENST00000261366 SPANXCQ9NY87 97 aa11.58□□□□□ -0.56
LMNB1-201ENST00000261366 UBE2D4Q9Y2X8 147 aa11.58□□□□□ -0.56
LMNB1-201ENST00000261366 IGHV4-30-2A0A087WSY4 118 aa11.57□□□□□ -0.56
LMNB1-201ENST00000261366 CHCHD7Q9BUK0 85 aa11.57□□□□□ -0.56
LMNB1-201ENST00000261366 H3BT86 120 aa11.57□□□□□ -0.56
LMNB1-201ENST00000261366 COX6A2Q02221 97 aa11.57□□□□□ -0.56
LMNB1-201ENST00000261366 SHISA2Q6UWI4 295 aa11.57□□□□□ -0.56
LMNB1-201ENST00000261366 Q9H8V8 135 aa11.57□□□□□ -0.56
LMNB1-201ENST00000261366 NRGNQ92686 78 aa11.57□□□□□ -0.56
LMNB1-201ENST00000261366 PIMREGQ9BSJ6 248 aa11.57□□□□□ -0.56
LMNB1-201ENST00000261366 FAM208BQ5VWN6 2430 aa11.56□□□□□ -0.56
LMNB1-201ENST00000261366 MAPK1IP1LQ8NDC0 245 aa11.56□□□□□ -0.56
LMNB1-201ENST00000261366 CITED2Q99967 270 aaPredicted RBP11.56□□□□□ -0.56
LMNB1-201ENST00000261366 JMJD1CQ15652 2540 aa11.56□□□□□ -0.56
LMNB1-201ENST00000261366 IGHV3OR16-12A0A075B7B8 117 aa11.56□□□□□ -0.56
LMNB1-201ENST00000261366 FAM236AA0A1B0GUQ0 79 aa11.56□□□□□ -0.56
LMNB1-201ENST00000261366 FAM236BA0A1B0GV22 79 aa11.56□□□□□ -0.56
LMNB1-201ENST00000261366 PSMB8P28062 276 aa11.56□□□□□ -0.56
LMNB1-201ENST00000261366 ATP5J2P56134 94 aa11.56□□□□□ -0.56
LMNB1-201ENST00000261366 Q8N2B8 174 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms