RNA–Protein interactions for RNA: ENST00000261302.9

FOXN3-201, Transcript of forkhead box N3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene FOXN3, Length 2,542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-201ENST00000261302 Q6JHZ5 121 aa9.37□□□□□ -0.91
FOXN3-201ENST00000261302 OPRPNQ99935 248 aaPredicted RBP9.37□□□□□ -0.91
FOXN3-201ENST00000261302 TRAV21A0A0B4J279 112 aa9.37□□□□□ -0.91
FOXN3-201ENST00000261302 TRBV6-5A0A0K0K1A5 114 aa9.37□□□□□ -0.91
FOXN3-201ENST00000261302 NDUFC2O95298 119 aa9.37□□□□□ -0.91
FOXN3-201ENST00000261302 IGHV3-23P01764 117 aa9.37□□□□□ -0.91
FOXN3-201ENST00000261302 C1orf43Q9BWL3 253 aa9.37□□□□□ -0.91
FOXN3-201ENST00000261302 COL12A1Q99715 3063 aa9.37□□□□□ -0.91
FOXN3-201ENST00000261302 TIMM17BO60830 172 aa9.36□□□□□ -0.91
FOXN3-201ENST00000261302 BAALC-AS2P0C853 105 aa9.36□□□□□ -0.91
FOXN3-201ENST00000261302 LRRK2Q5S007 2527 aa9.36□□□□□ -0.91
FOXN3-201ENST00000261302 IGHV3OR16-8A0A075B7F1 116 aa9.36□□□□□ -0.91
FOXN3-201ENST00000261302 TMEM178BH3BS89 294 aa9.36□□□□□ -0.91
FOXN3-201ENST00000261302 M0R1W7 72 aa9.36□□□□□ -0.91
FOXN3-201ENST00000261302 NBR2O15453 112 aa9.36□□□□□ -0.91
FOXN3-201ENST00000261302 PSMB8P28062 276 aa9.36□□□□□ -0.91
FOXN3-201ENST00000261302 SUMO4Q6EEV6 95 aa9.36□□□□□ -0.91
FOXN3-201ENST00000261302 DEFB104AQ8WTQ1 72 aa9.36□□□□□ -0.91
FOXN3-201ENST00000261302 NDUFA12Q9UI09 145 aa9.36□□□□□ -0.91
FOXN3-201ENST00000261302 DOPEY2Q9Y3R5 2298 aa9.35□□□□□ -0.91
FOXN3-201ENST00000261302 USP17L23D6RBM5 183 aa9.35□□□□□ -0.91
FOXN3-201ENST00000261302 ZFAND2AQ8N6M9 145 aa9.35□□□□□ -0.91
FOXN3-201ENST00000261302 C9orf85Q96MD7 179 aa9.35□□□□□ -0.91
FOXN3-201ENST00000261302 USP9YO00507 2555 aaPredicted RBP9.35□□□□□ -0.91
FOXN3-201ENST00000261302 IGHV1-58A0A0C4DH39 117 aa9.35□□□□□ -0.91
FOXN3-201ENST00000261302 RNASE3P12724 160 aaKnown RBP9.35□□□□□ -0.91
FOXN3-201ENST00000261302 NPC2P61916 151 aa9.35□□□□□ -0.91
FOXN3-201ENST00000261302 FAM27E3Q08E93 113 aa9.35□□□□□ -0.91
FOXN3-201ENST00000261302 FHL2Q14192 279 aa9.35□□□□□ -0.91
FOXN3-201ENST00000261302 KAAG1Q9UBP8 84 aa9.35□□□□□ -0.91
FOXN3-201ENST00000261302 ICE1Q9Y2F5 2266 aa9.34□□□□□ -0.91
FOXN3-201ENST00000261302 RPL35AP18077 110 aaKnown RBP9.34□□□□□ -0.91
FOXN3-201ENST00000261302 LINC01561Q8N1V8 128 aa9.34□□□□□ -0.91
FOXN3-201ENST00000261302 TMEM86BQ8N661 226 aa9.34□□□□□ -0.91
FOXN3-201ENST00000261302 NPBQ8NG41 125 aa9.34□□□□□ -0.91
FOXN3-201ENST00000261302 ASH1LQ9NR48 2969 aaKnown RBP9.34□□□□□ -0.91
FOXN3-201ENST00000261302 TRAV12-3A0A0B4J271 114 aa9.34□□□□□ -0.91
FOXN3-201ENST00000261302 IGF1P05019 195 aa9.34□□□□□ -0.91
FOXN3-201ENST00000261302 UTP20O75691 2785 aaKnown RBP9.34□□□□□ -0.91
FOXN3-201ENST00000261302 RNASE4P34096 147 aaKnown RBP9.33□□□□□ -0.92
FOXN3-201ENST00000261302 ARHGAP32A7KAX9 2087 aa9.33□□□□□ -0.92
FOXN3-201ENST00000261302 IGLV4-3A0A075B6K6 122 aa9.33□□□□□ -0.92
FOXN3-201ENST00000261302 MRPS36P82909 103 aaKnown RBP9.33□□□□□ -0.92
FOXN3-201ENST00000261302 VMO1Q7Z5L0 202 aa9.33□□□□□ -0.92
FOXN3-201ENST00000261302 CLPSL1A2RUU4 121 aa9.32□□□□□ -0.92
FOXN3-201ENST00000261302 PRIMA1Q86XR5 153 aa9.32□□□□□ -0.92
FOXN3-201ENST00000261302 C20orf203Q8NBC4 194 aa9.32□□□□□ -0.92
FOXN3-201ENST00000261302 PCNX1Q96RV3 2341 aa9.32□□□□□ -0.92
FOXN3-201ENST00000261302 TRAV12-2A0A075B6T6 113 aa9.32□□□□□ -0.92
FOXN3-201ENST00000261302 IGHV3-35A0A0C4DH35 117 aa9.32□□□□□ -0.92
FOXN3-201ENST00000261302 SEC61GP60059 68 aa9.32□□□□□ -0.92
FOXN3-201ENST00000261302 PRB3Q04118 309 aaPredicted RBP9.32□□□□□ -0.92
FOXN3-201ENST00000261302 LINC01560Q8TB33 94 aa9.32□□□□□ -0.92
FOXN3-201ENST00000261302 VSIG2Q96IQ7 327 aa9.31□□□□□ -0.92
FOXN3-201ENST00000261302 NACAE9PAV3 2078 aa9.31□□□□□ -0.92
FOXN3-201ENST00000261302 MUC4Q99102 2169 aa9.31□□□□□ -0.92
FOXN3-201ENST00000261302 PTPN13Q12923 2485 aa9.31□□□□□ -0.92
FOXN3-201ENST00000261302 PLCE1Q9P212 2302 aa9.31□□□□□ -0.92
FOXN3-201ENST00000261302 A0A087WVE0 104 aa9.31□□□□□ -0.92
FOXN3-201ENST00000261302 IGHV3-66A0A0C4DH42 116 aa9.31□□□□□ -0.92
FOXN3-201ENST00000261302 IGKV3D-7A0A0C4DH55 119 aa9.31□□□□□ -0.92
FOXN3-201ENST00000261302 GNRH2O43555 120 aa9.31□□□□□ -0.92
FOXN3-201ENST00000261302 C9orf139Q6ZV77 190 aa9.31□□□□□ -0.92
FOXN3-201ENST00000261302 SERP1Q9Y6X1 66 aa9.31□□□□□ -0.92
FOXN3-201ENST00000261302 ZNF415Q09FC8 603 aa9.3□□□□□ -0.92
FOXN3-201ENST00000261302 RS1O15537 224 aa9.3□□□□□ -0.92
FOXN3-201ENST00000261302 ADGRG4Q8IZF6 3080 aa9.3□□□□□ -0.92
FOXN3-201ENST00000261302 NBPF19A0A087WUL8 3843 aa9.29□□□□□ -0.92
FOXN3-201ENST00000261302 FAM236DA0A1B0GTK5 79 aa9.29□□□□□ -0.92
FOXN3-201ENST00000261302 DNAL4O96015 105 aa9.29□□□□□ -0.92
FOXN3-201ENST00000261302 FAM236CP0DP71 79 aa9.29□□□□□ -0.92
FOXN3-201ENST00000261302 COX7A1P24310 79 aa9.29□□□□□ -0.92
FOXN3-201ENST00000261302 NDPQ00604 133 aa9.29□□□□□ -0.92
FOXN3-201ENST00000261302 C22orf34Q6ZV56 151 aa9.29□□□□□ -0.92
FOXN3-201ENST00000261302 APRG1Q8IVJ8 170 aa9.29□□□□□ -0.92
FOXN3-201ENST00000261302 NUP37Q8NFH4 326 aa9.29□□□□□ -0.92
FOXN3-201ENST00000261302 CCL17Q92583 94 aa9.29□□□□□ -0.92
FOXN3-201ENST00000261302 FAM223BA6NKX1 122 aa9.29□□□□□ -0.92
FOXN3-201ENST00000261302 Q8N2B8 174 aa9.29□□□□□ -0.92
FOXN3-201ENST00000261302 PKIGQ9Y2B9 76 aa9.29□□□□□ -0.92
FOXN3-201ENST00000261302 UBE2D4Q9Y2X8 147 aa9.29□□□□□ -0.92
FOXN3-201ENST00000261302 F5H697 171 aa9.28□□□□□ -0.92
FOXN3-201ENST00000261302 SPTAN1Q13813 2472 aaKnown RBP9.28□□□□□ -0.92
FOXN3-201ENST00000261302 C16orf95Q9H693 158 aa9.28□□□□□ -0.92
FOXN3-201ENST00000261302 C16orf92Q96LL3 132 aa9.27□□□□□ -0.93
FOXN3-201ENST00000261302 C20orf173Q96LM9 149 aa9.27□□□□□ -0.93
FOXN3-201ENST00000261302 TMEM243Q9BU79 118 aa9.27□□□□□ -0.93
FOXN3-201ENST00000261302 LINC00846Q9NV44 126 aa9.27□□□□□ -0.93
FOXN3-201ENST00000261302 HECTD1Q9ULT8 2610 aa9.27□□□□□ -0.93
FOXN3-201ENST00000261302 U3KQE9 123 aa9.27□□□□□ -0.93
FOXN3-201ENST00000261302 SPTBN1Q01082 2364 aaKnown RBP9.27□□□□□ -0.93
FOXN3-201ENST00000261302 IGHV3OR16-13A0A075B7E8 117 aa9.27□□□□□ -0.93
FOXN3-201ENST00000261302 A0A087WWL8 130 aa9.27□□□□□ -0.93
FOXN3-201ENST00000261302 IGHV3-74A0A0B4J1X5 117 aa9.27□□□□□ -0.93
FOXN3-201ENST00000261302 FAM223AQ8IWN6 122 aa9.27□□□□□ -0.93
FOXN3-201ENST00000261302 FAM218AQ96MZ4 157 aa9.27□□□□□ -0.93
FOXN3-201ENST00000261302 V9GYY9 64 aa9.27□□□□□ -0.93
FOXN3-201ENST00000261302 CYSRT1A8MQ03 144 aa9.26□□□□□ -0.93
FOXN3-201ENST00000261302 RPL11P62913 178 aaKnown RBP9.26□□□□□ -0.93
FOXN3-201ENST00000261302 LY6G5BQ8NDX9 201 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms