RNA–Protein interactions for RNA: ENST00000254325.8

RFX1-201, Transcript of regulatory factor X1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-201ENST00000254325 FN1P02751 2386 aaKnown RBP11.56□□□□□ -0.56
RFX1-201ENST00000254325 GAGE7O76087 117 aa11.56□□□□□ -0.56
RFX1-201ENST00000254325 GAGE12FP0CL80 117 aa11.56□□□□□ -0.56
RFX1-201ENST00000254325 GAGE12GP0CL81 117 aa11.56□□□□□ -0.56
RFX1-201ENST00000254325 GAGE12IP0CL82 117 aa11.56□□□□□ -0.56
RFX1-201ENST00000254325 TIMM21Q9BVV7 248 aa11.56□□□□□ -0.56
RFX1-201ENST00000254325 FLNAP21333 2647 aaKnown RBP11.56□□□□□ -0.56
RFX1-201ENST00000254325 NOP10Q9NPE3 64 aaKnown RBP11.56□□□□□ -0.56
RFX1-201ENST00000254325 C12orf74Q32Q52 190 aa11.55□□□□□ -0.56
RFX1-201ENST00000254325 K7EP34 96 aa11.55□□□□□ -0.56
RFX1-201ENST00000254325 PGPEP1Q9NXJ5 209 aa11.55□□□□□ -0.56
RFX1-201ENST00000254325 LINC00315P59091 139 aa11.54□□□□□ -0.56
RFX1-201ENST00000254325 TMEM101Q96IK0 257 aa11.54□□□□□ -0.56
RFX1-201ENST00000254325 TTC32Q5I0X7 151 aa11.54□□□□□ -0.56
RFX1-201ENST00000254325 CEMP1Q6PRD7 247 aaPredicted RBP11.54□□□□□ -0.56
RFX1-201ENST00000254325 ESM1Q9NQ30 184 aa11.54□□□□□ -0.56
RFX1-201ENST00000254325 ODF3L2Q3SX64 289 aa11.53□□□□□ -0.56
RFX1-201ENST00000254325 FASNP49327 2511 aaKnown RBP11.53□□□□□ -0.56
RFX1-201ENST00000254325 RBMY1BA6NDE4 496 aaKnown RBP11.52□□□□□ -0.57
RFX1-201ENST00000254325 RBMY1EA6NEQ0 496 aaKnown RBP11.52□□□□□ -0.57
RFX1-201ENST00000254325 RNASE1P07998 156 aaKnown RBP11.52□□□□□ -0.57
RFX1-201ENST00000254325 RBMY1DP0C7P1 496 aaKnown RBP11.52□□□□□ -0.57
RFX1-201ENST00000254325 MUC4Q99102 2169 aa11.52□□□□□ -0.57
RFX1-201ENST00000254325 TSHBP01222 138 aa11.52□□□□□ -0.57
RFX1-201ENST00000254325 RBMY1A1P0DJD3 496 aaKnown RBP11.52□□□□□ -0.57
RFX1-201ENST00000254325 RBMY1CP0DJD4 496 aa11.52□□□□□ -0.57
RFX1-201ENST00000254325 RBMY1FQ15415 496 aaKnown RBP11.52□□□□□ -0.57
RFX1-201ENST00000254325 TRAV13-1A0A0B4J241 112 aa11.51□□□□□ -0.57
RFX1-201ENST00000254325 DEFB130BP0DP73 79 aa11.51□□□□□ -0.57
RFX1-201ENST00000254325 DEFB130AP0DP74 79 aa11.51□□□□□ -0.57
RFX1-201ENST00000254325 CFAP126Q5VTH2 177 aa11.51□□□□□ -0.57
RFX1-201ENST00000254325 IGIPA6NJ69 53 aa11.51□□□□□ -0.57
RFX1-201ENST00000254325 ADARB2-AS1A8MUL3 147 aa11.51□□□□□ -0.57
RFX1-201ENST00000254325 CIRBPQ14011 172 aaKnown RBP11.51□□□□□ -0.57
RFX1-201ENST00000254325 DNAJC30Q96LL9 226 aa11.51□□□□□ -0.57
RFX1-201ENST00000254325 UTP20O75691 2785 aaKnown RBP11.5□□□□□ -0.57
RFX1-201ENST00000254325 SMR3AQ99954 134 aa11.5□□□□□ -0.57
RFX1-201ENST00000254325 JMJD1CQ15652 2540 aa11.5□□□□□ -0.57
RFX1-201ENST00000254325 MEIG1Q5JSS6 88 aa11.5□□□□□ -0.57
RFX1-201ENST00000254325 CFAP161Q6P656 301 aa11.5□□□□□ -0.57
RFX1-201ENST00000254325 SVIPQ8NHG7 77 aa11.5□□□□□ -0.57
RFX1-201ENST00000254325 ITPR3Q14573 2671 aa11.5□□□□□ -0.57
RFX1-201ENST00000254325 MTURNQ8N3F0 131 aa11.49□□□□□ -0.57
RFX1-201ENST00000254325 SPANXA1Q9NS26 97 aa11.49□□□□□ -0.57
RFX1-201ENST00000254325 CRYBG3Q68DQ2 2970 aa11.49□□□□□ -0.57
RFX1-201ENST00000254325 NPC2P61916 151 aa11.49□□□□□ -0.57
RFX1-201ENST00000254325 Q6ZTI0 123 aa11.49□□□□□ -0.57
RFX1-201ENST00000254325 CHCHD5Q9BSY4 110 aa11.49□□□□□ -0.57
RFX1-201ENST00000254325 A0A0U1RRA0 63 aa11.49□□□□□ -0.57
RFX1-201ENST00000254325 TM2D2Q9BX73 214 aa11.49□□□□□ -0.57
RFX1-201ENST00000254325 WFDC10AQ9H1F0 79 aa11.49□□□□□ -0.57
RFX1-201ENST00000254325 IGLV4-3A0A075B6K6 122 aa11.48□□□□□ -0.57
RFX1-201ENST00000254325 IGLL5B9A064 214 aa11.48□□□□□ -0.57
RFX1-201ENST00000254325 TMEM262E9PQX1 116 aa11.48□□□□□ -0.57
RFX1-201ENST00000254325 LEPROTO15243 131 aa11.48□□□□□ -0.57
RFX1-201ENST00000254325 TEX15Q9BXT5 2789 aa11.48□□□□□ -0.57
RFX1-201ENST00000254325 SPINK8P0C7L1 97 aa11.48□□□□□ -0.57
RFX1-201ENST00000254325 TMEM263Q8WUH6 116 aaKnown RBP11.47□□□□□ -0.57
RFX1-201ENST00000254325 KRTAP1-3Q8IUG1 177 aa11.46□□□□□ -0.57
RFX1-201ENST00000254325 NDUFA12Q9UI09 145 aa11.46□□□□□ -0.57
RFX1-201ENST00000254325 CR1P17927 2039 aa11.46□□□□□ -0.57
RFX1-201ENST00000254325 TRBV7-3A0A075B6L6 115 aa11.46□□□□□ -0.57
RFX1-201ENST00000254325 K7EQD1 137 aa11.46□□□□□ -0.57
RFX1-201ENST00000254325 HILS1P60008 231 aa11.46□□□□□ -0.57
RFX1-201ENST00000254325 CKS1BP61024 79 aa11.46□□□□□ -0.57
RFX1-201ENST00000254325 TOMM7Q9P0U1 55 aa11.46□□□□□ -0.57
RFX1-201ENST00000254325 POM121L12Q8N7R1 296 aa11.46□□□□□ -0.58
RFX1-201ENST00000254325 ZANQ9Y493 2812 aa11.46□□□□□ -0.58
RFX1-201ENST00000254325 C16orf74Q96GX8 76 aa11.46□□□□□ -0.58
RFX1-201ENST00000254325 H3BMG7 143 aa11.45□□□□□ -0.58
RFX1-201ENST00000254325 MORN3Q6PF18 240 aaPredicted RBP11.44□□□□□ -0.58
RFX1-201ENST00000254325 LINC00467Q9BRT7 94 aa11.44□□□□□ -0.58
RFX1-201ENST00000254325 ERG28Q9UKR5 140 aa11.44□□□□□ -0.58
RFX1-201ENST00000254325 HECTD1Q9ULT8 2610 aa11.44□□□□□ -0.58
RFX1-201ENST00000254325 IGLV4-69A0A075B6H9 119 aa11.44□□□□□ -0.58
RFX1-201ENST00000254325 Q6ZUT4 128 aa11.44□□□□□ -0.58
RFX1-201ENST00000254325 TMEM243Q9BU79 118 aa11.44□□□□□ -0.58
RFX1-201ENST00000254325 RS1O15537 224 aa11.44□□□□□ -0.58
RFX1-201ENST00000254325 SNCGO76070 127 aa11.44□□□□□ -0.58
RFX1-201ENST00000254325 ZNF625Q96I27 306 aaPredicted RBP11.44□□□□□ -0.58
RFX1-201ENST00000254325 ZNF22P17026 224 aaPredicted RBP11.44□□□□□ -0.58
RFX1-201ENST00000254325 TRAV8-3A0A0A6YYJ7 113 aa11.43□□□□□ -0.58
RFX1-201ENST00000254325 COX6CP09669 75 aa11.43□□□□□ -0.58
RFX1-201ENST00000254325 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.42□□□□□ -0.58
RFX1-201ENST00000254325 LY6G6DO95868 133 aa11.42□□□□□ -0.58
RFX1-201ENST00000254325 C1orf158Q8N1D5 194 aa11.42□□□□□ -0.58
RFX1-201ENST00000254325 ANAPC13Q9BS18 74 aa11.42□□□□□ -0.58
RFX1-201ENST00000254325 CSMD1Q96PZ7 3565 aa11.42□□□□□ -0.58
RFX1-201ENST00000254325 ETDBQ3ZM63 59 aa11.42□□□□□ -0.58
RFX1-201ENST00000254325 Q6ZSN1 163 aa11.42□□□□□ -0.58
RFX1-201ENST00000254325 HTN3P15516 51 aa11.42□□□□□ -0.58
RFX1-201ENST00000254325 GAGE6Q13070 117 aa11.42□□□□□ -0.58
RFX1-201ENST00000254325 PIK3CD-AS1Q5SR53 167 aa11.41□□□□□ -0.58
RFX1-201ENST00000254325 TRAV4A0A0B4J268 109 aa11.41□□□□□ -0.58
RFX1-201ENST00000254325 A0A0J9YY99 117 aa11.41□□□□□ -0.58
RFX1-201ENST00000254325 TMEM223A0PJW6 202 aa11.41□□□□□ -0.58
RFX1-201ENST00000254325 INAFM1C9JVW0 142 aa11.41□□□□□ -0.58
RFX1-201ENST00000254325 IGHV3-30-3P0DP02 117 aa11.41□□□□□ -0.58
RFX1-201ENST00000254325 DAZ2Q13117 558 aaKnown RBP11.41□□□□□ -0.58
RFX1-201ENST00000254325 DAZ4Q86SG3 579 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms