RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 UBE2AP49459 152 aa10.05□□□□□ -0.8
PCDHGA3-201ENST00000253812 SPRY4Q9C004 299 aa10.05□□□□□ -0.8
PCDHGA3-201ENST00000253812 BPTFQ12830 3046 aa10.05□□□□□ -0.8
PCDHGA3-201ENST00000253812 PIEZO2Q9H5I5 2752 aa10.05□□□□□ -0.8
PCDHGA3-201ENST00000253812 K7ERS5 55 aa10.05□□□□□ -0.8
PCDHGA3-201ENST00000253812 PRR14LQ5THK1 2151 aa10.05□□□□□ -0.8
PCDHGA3-201ENST00000253812 CSDC2Q9Y534 153 aaKnown RBP10.05□□□□□ -0.8
PCDHGA3-201ENST00000253812 COL4A3Q01955 1670 aa10.04□□□□□ -0.8
PCDHGA3-201ENST00000253812 IGLV10-54A0A075B6I4 117 aa10.04□□□□□ -0.8
PCDHGA3-201ENST00000253812 IGKV2D-24A0A075B6R9 120 aa10.04□□□□□ -0.8
PCDHGA3-201ENST00000253812 MSMBP08118 114 aa10.04□□□□□ -0.8
PCDHGA3-201ENST00000253812 LINC00308Q8TCZ7 52 aa10.04□□□□□ -0.8
PCDHGA3-201ENST00000253812 C2CD3Q4AC94 2353 aa10.04□□□□□ -0.8
PCDHGA3-201ENST00000253812 KMT2EQ8IZD2 1858 aa10.04□□□□□ -0.8
PCDHGA3-201ENST00000253812 ZNF22P17026 224 aaPredicted RBP10.04□□□□□ -0.8
PCDHGA3-201ENST00000253812 IGFL2Q6UWQ7 119 aa10.04□□□□□ -0.8
PCDHGA3-201ENST00000253812 VPREB3Q9UKI3 123 aa10.04□□□□□ -0.8
PCDHGA3-201ENST00000253812 ODF3L1Q8IXM7 274 aa10.04□□□□□ -0.8
PCDHGA3-201ENST00000253812 Q6JHZ5 121 aa10.03□□□□□ -0.8
PCDHGA3-201ENST00000253812 IGHV3-30P01768 117 aa10.03□□□□□ -0.8
PCDHGA3-201ENST00000253812 IGHV3-30-5P0DP03 117 aa10.03□□□□□ -0.8
PCDHGA3-201ENST00000253812 SCXQ7RTU7 201 aa10.03□□□□□ -0.8
PCDHGA3-201ENST00000253812 PRR15LQ9BU68 103 aa10.03□□□□□ -0.8
PCDHGA3-201ENST00000253812 PLXNB1O43157 2135 aa10.03□□□□□ -0.8
PCDHGA3-201ENST00000253812 OBSL1O75147 1896 aa10.03□□□□□ -0.8
PCDHGA3-201ENST00000253812 LAMA2P24043 3122 aaKnown RBP10.03□□□□□ -0.8
PCDHGA3-201ENST00000253812 TMEM223A0PJW6 202 aa10.03□□□□□ -0.8
PCDHGA3-201ENST00000253812 IGLV2-14P01704 120 aa10.03□□□□□ -0.8
PCDHGA3-201ENST00000253812 ADAMTS9Q9P2N4 1935 aa10.03□□□□□ -0.8
PCDHGA3-201ENST00000253812 APOC4P55056 127 aa10.03□□□□□ -0.8
PCDHGA3-201ENST00000253812 LINC01356Q8N9X3 169 aa10.03□□□□□ -0.8
PCDHGA3-201ENST00000253812 P0C879 139 aa10.02□□□□□ -0.8
PCDHGA3-201ENST00000253812 SHISA2Q6UWI4 295 aa10.02□□□□□ -0.8
PCDHGA3-201ENST00000253812 TRBV27A0A0K0K1C4 114 aa10.02□□□□□ -0.81
PCDHGA3-201ENST00000253812 H0Y9J4 135 aa10.02□□□□□ -0.81
PCDHGA3-201ENST00000253812 IGKV4-1P06312 121 aa10.02□□□□□ -0.81
PCDHGA3-201ENST00000253812 NPBQ8NG41 125 aa10.02□□□□□ -0.81
PCDHGA3-201ENST00000253812 SPAG11BQ08648 103 aa10.02□□□□□ -0.81
PCDHGA3-201ENST00000253812 GRNP28799 593 aaKnown RBP10.02□□□□□ -0.81
PCDHGA3-201ENST00000253812 TIRAPP58753 221 aa10.02□□□□□ -0.81
PCDHGA3-201ENST00000253812 DKK4Q9UBT3 224 aa10.02□□□□□ -0.81
PCDHGA3-201ENST00000253812 GYPEP15421 78 aa10.01□□□□□ -0.81
PCDHGA3-201ENST00000253812 NRGNQ92686 78 aa10.01□□□□□ -0.81
PCDHGA3-201ENST00000253812 SEM1Q6ZVN7 128 aa10.01□□□□□ -0.81
PCDHGA3-201ENST00000253812 MAPK1IP1LQ8NDC0 245 aa10.01□□□□□ -0.81
PCDHGA3-201ENST00000253812 NCOA6Q14686 2063 aaPredicted RBP10.01□□□□□ -0.81
PCDHGA3-201ENST00000253812 IGHV7-81A0A0B4J1V7 117 aa10.01□□□□□ -0.81
PCDHGA3-201ENST00000253812 MIFP14174 115 aa10□□□□□ -0.81
PCDHGA3-201ENST00000253812 U3KQK5 164 aa10□□□□□ -0.81
PCDHGA3-201ENST00000253812 TRBV10-1A0A0K0K1A3 114 aa10□□□□□ -0.81
PCDHGA3-201ENST00000253812 IGF2-ASQ6U949 168 aa10□□□□□ -0.81
PCDHGA3-201ENST00000253812 CDKN2A-AS1Q9UH64 79 aa10□□□□□ -0.81
PCDHGA3-201ENST00000253812 PRO0628Q9UI54 55 aa10□□□□□ -0.81
PCDHGA3-201ENST00000253812 WISP2O76076 250 aa10□□□□□ -0.81
PCDHGA3-201ENST00000253812 ZNF80P51504 273 aaPredicted RBP10□□□□□ -0.81
PCDHGA3-201ENST00000253812 TRAV7A0A075B6U4 112 aa9.99□□□□□ -0.81
PCDHGA3-201ENST00000253812 SLPIP03973 132 aa9.99□□□□□ -0.81
PCDHGA3-201ENST00000253812 KRTAP27-1Q3LI81 207 aa9.99□□□□□ -0.81
PCDHGA3-201ENST00000253812 C16orf74Q96GX8 76 aa9.99□□□□□ -0.81
PCDHGA3-201ENST00000253812 MKI67P46013 3256 aaKnown RBP9.99□□□□□ -0.81
PCDHGA3-201ENST00000253812 RNF223E7ERA6 249 aa9.99□□□□□ -0.81
PCDHGA3-201ENST00000253812 FAM222AQ5U5X8 452 aa9.99□□□□□ -0.81
PCDHGA3-201ENST00000253812 IGHV4OR15-8A0A075B7B6 117 aa9.99□□□□□ -0.81
PCDHGA3-201ENST00000253812 A0A087WW49 117 aa9.99□□□□□ -0.81
PCDHGA3-201ENST00000253812 CEMP1Q6PRD7 247 aaPredicted RBP9.99□□□□□ -0.81
PCDHGA3-201ENST00000253812 H7C423 109 aa9.99□□□□□ -0.81
PCDHGA3-201ENST00000253812 LHBP01229 141 aa9.99□□□□□ -0.81
PCDHGA3-201ENST00000253812 IGKV1D-37A0A075B6S9 117 aa9.98□□□□□ -0.81
PCDHGA3-201ENST00000253812 CTSZQ9UBR2 303 aa9.98□□□□□ -0.81
PCDHGA3-201ENST00000253812 TLN1Q9Y490 2541 aaKnown RBP9.98□□□□□ -0.81
PCDHGA3-201ENST00000253812 ZNF295-AS1Q8N0V1 137 aa9.98□□□□□ -0.81
PCDHGA3-201ENST00000253812 LAMA3Q16787 3333 aa9.98□□□□□ -0.81
PCDHGA3-201ENST00000253812 CGB7P0DN87 165 aa9.98□□□□□ -0.81
PCDHGA3-201ENST00000253812 IBA57-AS1B1ANH7 110 aa9.97□□□□□ -0.81
PCDHGA3-201ENST00000253812 AJUBAQ96IF1 538 aa9.97□□□□□ -0.81
PCDHGA3-201ENST00000253812 PPDPFQ9H3Y8 114 aa9.97□□□□□ -0.81
PCDHGA3-201ENST00000253812 COL4A4P53420 1690 aaPredicted RBP9.97□□□□□ -0.81
PCDHGA3-201ENST00000253812 IGLV4-3A0A075B6K6 122 aa9.96□□□□□ -0.81
PCDHGA3-201ENST00000253812 CGB3P0DN86 165 aa9.96□□□□□ -0.81
PCDHGA3-201ENST00000253812 Q8N976 141 aa9.96□□□□□ -0.81
PCDHGA3-201ENST00000253812 SOSTDC1Q6X4U4 206 aa9.96□□□□□ -0.82
PCDHGA3-201ENST00000253812 E7EUB6 86 aa9.95□□□□□ -0.82
PCDHGA3-201ENST00000253812 K7EMT4 169 aa9.95□□□□□ -0.82
PCDHGA3-201ENST00000253812 IGLV2-23P01705 113 aa9.95□□□□□ -0.82
PCDHGA3-201ENST00000253812 Q96MF0 132 aa9.95□□□□□ -0.82
PCDHGA3-201ENST00000253812 SORL1Q92673 2214 aa9.95□□□□□ -0.82
PCDHGA3-201ENST00000253812 RITA1Q96K30 269 aa9.95□□□□□ -0.82
PCDHGA3-201ENST00000253812 LINC00310P59036 64 aa9.95□□□□□ -0.82
PCDHGA3-201ENST00000253812 SPRNQ5BIV9 151 aa9.95□□□□□ -0.82
PCDHGA3-201ENST00000253812 CCKP06307 115 aa9.94□□□□□ -0.82
PCDHGA3-201ENST00000253812 LOC107984640A0A0U1RRK4 108 aa9.94□□□□□ -0.82
PCDHGA3-201ENST00000253812 ZFAND3Q9H8U3 227 aa9.94□□□□□ -0.82
PCDHGA3-201ENST00000253812 PRR4Q16378 134 aa9.94□□□□□ -0.82
PCDHGA3-201ENST00000253812 CASC2Q6XLA1 102 aa9.94□□□□□ -0.82
PCDHGA3-201ENST00000253812 TMEM263Q8WUH6 116 aaKnown RBP9.93□□□□□ -0.82
PCDHGA3-201ENST00000253812 TNRC6BQ9UPQ9 1833 aaKnown RBP9.93□□□□□ -0.82
PCDHGA3-201ENST00000253812 APRG1Q8IVJ8 170 aa9.93□□□□□ -0.82
PCDHGA3-201ENST00000253812 PCNX3Q9H6A9 2034 aa9.93□□□□□ -0.82
PCDHGA3-201ENST00000253812 RNF185Q96GF1 192 aa9.92□□□□□ -0.82
PCDHGA3-201ENST00000253812 CEP295Q9C0D2 2601 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms