RNA–Protein interactions for RNA: ENST00000252699.6

ACTN4-201, Transcript of actinin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTN4, Length 4,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-201ENST00000252699 C11orf21Q9P2W6 132 aa12.69□□□□□ -0.38
ACTN4-201ENST00000252699 TRAV8-4A0A0B4J246 113 aa12.69□□□□□ -0.38
ACTN4-201ENST00000252699 C11orf86A6NJI1 115 aa12.69□□□□□ -0.38
ACTN4-201ENST00000252699 FAM222AQ5U5X8 452 aa12.68□□□□□ -0.38
ACTN4-201ENST00000252699 SHISA2Q6UWI4 295 aa12.68□□□□□ -0.38
ACTN4-201ENST00000252699 TRBV20-1A0A075B6N2 111 aa12.68□□□□□ -0.38
ACTN4-201ENST00000252699 MRPS12O15235 138 aaKnown RBP12.68□□□□□ -0.38
ACTN4-201ENST00000252699 C12orf74Q32Q52 190 aa12.68□□□□□ -0.38
ACTN4-201ENST00000252699 CEMP1Q6PRD7 247 aaPredicted RBP12.67□□□□□ -0.38
ACTN4-201ENST00000252699 NKAPP1Q8N9T2 125 aa12.67□□□□□ -0.38
ACTN4-201ENST00000252699 SCRT2Q9NQ03 307 aa12.67□□□□□ -0.38
ACTN4-201ENST00000252699 MTURNQ8N3F0 131 aa12.67□□□□□ -0.38
ACTN4-201ENST00000252699 EDN2P20800 178 aa12.66□□□□□ -0.38
ACTN4-201ENST00000252699 KLLNB2CW77 178 aa12.66□□□□□ -0.38
ACTN4-201ENST00000252699 COX7A2LO14548 114 aa12.66□□□□□ -0.38
ACTN4-201ENST00000252699 WFDC10AQ9H1F0 79 aa12.66□□□□□ -0.38
ACTN4-201ENST00000252699 SMIM9A6NGZ8 99 aa12.66□□□□□ -0.38
ACTN4-201ENST00000252699 HERV-K104P63124 156 aa12.66□□□□□ -0.38
ACTN4-201ENST00000252699 MRGPRG-AS1Q2M3A8 158 aa12.66□□□□□ -0.38
ACTN4-201ENST00000252699 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.66□□□□□ -0.38
ACTN4-201ENST00000252699 PRSS47A8MTI9 375 aa12.64□□□□□ -0.39
ACTN4-201ENST00000252699 RNASE3P12724 160 aaKnown RBP12.64□□□□□ -0.39
ACTN4-201ENST00000252699 TRAV13-2A0A0B4J235 113 aa12.64□□□□□ -0.39
ACTN4-201ENST00000252699 PCP4P48539 62 aa12.64□□□□□ -0.39
ACTN4-201ENST00000252699 SPATA12Q7Z6I5 190 aa12.64□□□□□ -0.39
ACTN4-201ENST00000252699 BOD1L2Q8IYS8 172 aa12.64□□□□□ -0.39
ACTN4-201ENST00000252699 EDA2RQ9HAV5 297 aa12.64□□□□□ -0.39
ACTN4-201ENST00000252699 A0A0C4DFX4 3053 aa12.64□□□□□ -0.39
ACTN4-201ENST00000252699 E9PLD3 99 aa12.64□□□□□ -0.39
ACTN4-201ENST00000252699 RNF185Q96GF1 192 aa12.64□□□□□ -0.39
ACTN4-201ENST00000252699 A0A1W2PPM0 123 aa12.64□□□□□ -0.39
ACTN4-201ENST00000252699 KLK12Q9UKR0 248 aa12.63□□□□□ -0.39
ACTN4-201ENST00000252699 PRUNE2Q8WUY3 3088 aa12.63□□□□□ -0.39
ACTN4-201ENST00000252699 Q6ZUT4 128 aa12.63□□□□□ -0.39
ACTN4-201ENST00000252699 TRAV26-1A0A087WT03 109 aa12.62□□□□□ -0.39
ACTN4-201ENST00000252699 M0QY20 66 aa12.62□□□□□ -0.39
ACTN4-201ENST00000252699 CFAP126Q5VTH2 177 aa12.62□□□□□ -0.39
ACTN4-201ENST00000252699 Q6ZVH6 145 aa12.62□□□□□ -0.39
ACTN4-201ENST00000252699 NDUFA7O95182 113 aa12.62□□□□□ -0.39
ACTN4-201ENST00000252699 LYRM9A8MSI8 78 aa12.61□□□□□ -0.39
ACTN4-201ENST00000252699 LAMA2P24043 3122 aaKnown RBP12.61□□□□□ -0.39
ACTN4-201ENST00000252699 BRI3O95415 125 aa12.61□□□□□ -0.39
ACTN4-201ENST00000252699 CFC1BP0CG36 223 aa12.61□□□□□ -0.39
ACTN4-201ENST00000252699 CFC1P0CG37 223 aa12.61□□□□□ -0.39
ACTN4-201ENST00000252699 COX7B2Q8TF08 81 aa12.61□□□□□ -0.39
ACTN4-201ENST00000252699 CAMK2N2Q96S95 79 aa12.61□□□□□ -0.39
ACTN4-201ENST00000252699 ETDBQ3ZM63 59 aa12.61□□□□□ -0.39
ACTN4-201ENST00000252699 PRM2P04554 102 aa12.6□□□□□ -0.39
ACTN4-201ENST00000252699 HECTD1Q9ULT8 2610 aa12.6□□□□□ -0.39
ACTN4-201ENST00000252699 K7EP34 96 aa12.6□□□□□ -0.39
ACTN4-201ENST00000252699 PROK1P58294 105 aa12.6□□□□□ -0.39
ACTN4-201ENST00000252699 IFITM1P13164 125 aa12.6□□□□□ -0.39
ACTN4-201ENST00000252699 C11orf45Q8TAV5 145 aa12.6□□□□□ -0.39
ACTN4-201ENST00000252699 ZNF580Q9UK33 172 aa12.6□□□□□ -0.39
ACTN4-201ENST00000252699 H3BMG7 143 aa12.59□□□□□ -0.39
ACTN4-201ENST00000252699 NEXN-AS1Q8NBZ9 246 aa12.59□□□□□ -0.39
ACTN4-201ENST00000252699 SIGMAR1Q99720 223 aa12.59□□□□□ -0.39
ACTN4-201ENST00000252699 A4D1N5 150 aa12.59□□□□□ -0.39
ACTN4-201ENST00000252699 MUSTN1Q8IVN3 82 aa12.59□□□□□ -0.39
ACTN4-201ENST00000252699 CCL25O15444 150 aa12.59□□□□□ -0.39
ACTN4-201ENST00000252699 NPSP0C0P6 89 aa12.59□□□□□ -0.39
ACTN4-201ENST00000252699 U3KQK5 164 aa12.59□□□□□ -0.39
ACTN4-201ENST00000252699 F8WEM9 126 aa12.58□□□□□ -0.4
ACTN4-201ENST00000252699 ODF3L2Q3SX64 289 aa12.58□□□□□ -0.4
ACTN4-201ENST00000252699 LINC00467Q9BRT7 94 aa12.58□□□□□ -0.4
ACTN4-201ENST00000252699 DAND5Q8N907 189 aa12.57□□□□□ -0.4
ACTN4-201ENST00000252699 HIGD1BQ9P298 99 aa12.57□□□□□ -0.4
ACTN4-201ENST00000252699 FXYD2P54710 66 aa12.57□□□□□ -0.4
ACTN4-201ENST00000252699 FAM110AQ9BQ89 295 aa12.57□□□□□ -0.4
ACTN4-201ENST00000252699 IGLL5B9A064 214 aa12.57□□□□□ -0.4
ACTN4-201ENST00000252699 IGHV1-58A0A0C4DH39 117 aa12.56□□□□□ -0.4
ACTN4-201ENST00000252699 MIFP14174 115 aa12.56□□□□□ -0.4
ACTN4-201ENST00000252699 SND1-IT1Q9HBX3 110 aa12.56□□□□□ -0.4
ACTN4-201ENST00000252699 RS1O15537 224 aa12.56□□□□□ -0.4
ACTN4-201ENST00000252699 C9orf85Q96MD7 179 aa12.55□□□□□ -0.4
ACTN4-201ENST00000252699 GAGE2AQ6NT46 116 aa12.55□□□□□ -0.4
ACTN4-201ENST00000252699 F8W1H4 67 aa12.54□□□□□ -0.4
ACTN4-201ENST00000252699 K7EP13 123 aa12.54□□□□□ -0.4
ACTN4-201ENST00000252699 NRACQ8N912 160 aa12.54□□□□□ -0.4
ACTN4-201ENST00000252699 TRBV27A0A0K0K1C4 114 aa12.54□□□□□ -0.4
ACTN4-201ENST00000252699 IGHV4-4A0A075B6R2 117 aa12.54□□□□□ -0.4
ACTN4-201ENST00000252699 SPAG11BQ08648 103 aa12.54□□□□□ -0.4
ACTN4-201ENST00000252699 OCIAD2Q56VL3 154 aa12.54□□□□□ -0.4
ACTN4-201ENST00000252699 LURAP1LQ8IV03 231 aa12.54□□□□□ -0.4
ACTN4-201ENST00000252699 TET2Q6N021 2002 aaPredicted RBP12.54□□□□□ -0.4
ACTN4-201ENST00000252699 TRBV6-4A0A1B0GX49 114 aa12.53□□□□□ -0.4
ACTN4-201ENST00000252699 CRYGDP07320 174 aa12.53□□□□□ -0.4
ACTN4-201ENST00000252699 CNFNQ9BYD5 112 aa12.53□□□□□ -0.4
ACTN4-201ENST00000252699 TRBV6-5A0A0K0K1A5 114 aa12.53□□□□□ -0.4
ACTN4-201ENST00000252699 GAS8-AS1O95177 125 aa12.53□□□□□ -0.4
ACTN4-201ENST00000252699 GTSF1LQ9H1H1 148 aa12.53□□□□□ -0.4
ACTN4-201ENST00000252699 GAGE2EQ4V326 116 aa12.52□□□□□ -0.4
ACTN4-201ENST00000252699 GAGE2DQ9UEU5 116 aa12.52□□□□□ -0.4
ACTN4-201ENST00000252699 IGLV4-3A0A075B6K6 122 aa12.52□□□□□ -0.4
ACTN4-201ENST00000252699 F8P00451 2351 aa12.52□□□□□ -0.4
ACTN4-201ENST00000252699 INAFM2P0DMQ5 153 aa12.52□□□□□ -0.41
ACTN4-201ENST00000252699 OXLD1Q5BKU9 147 aa12.52□□□□□ -0.41
ACTN4-201ENST00000252699 CARD19Q96LW7 228 aa12.52□□□□□ -0.41
ACTN4-201ENST00000252699 GAGE2BQ13066 116 aa12.51□□□□□ -0.41
ACTN4-201ENST00000252699 DEFB131BA0A096LNP1 70 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms