RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 PYGO1Q9Y3Y4 419 aa14.16□□□□□ -0.14
CDC42EP1-201ENST00000249014 CCL24O00175 119 aa14.16□□□□□ -0.14
CDC42EP1-201ENST00000249014 AZU1P20160 251 aa14.16□□□□□ -0.14
CDC42EP1-201ENST00000249014 TEX29Q8N6K0 151 aa14.16□□□□□ -0.14
CDC42EP1-201ENST00000249014 IGHV3-64A0A075B6Q5 118 aa14.15□□□□□ -0.14
CDC42EP1-201ENST00000249014 TMEM238LA0A1B0GVL6 79 aa14.15□□□□□ -0.14
CDC42EP1-201ENST00000249014 A6NJY4 79 aa14.15□□□□□ -0.14
CDC42EP1-201ENST00000249014 LGALS3P17931 250 aaKnown RBP14.15□□□□□ -0.14
CDC42EP1-201ENST00000249014 BEAN1Q3B7T3 259 aa14.15□□□□□ -0.14
CDC42EP1-201ENST00000249014 SLC25A29Q8N8R3 303 aa14.15□□□□□ -0.14
CDC42EP1-201ENST00000249014 SPANXB1Q9NS25 103 aaPredicted RBP14.15□□□□□ -0.14
CDC42EP1-201ENST00000249014 PGPEP1Q9NXJ5 209 aa14.15□□□□□ -0.14
CDC42EP1-201ENST00000249014 H3BMG7 143 aa14.15□□□□□ -0.15
CDC42EP1-201ENST00000249014 LEPROTO15243 131 aa14.15□□□□□ -0.15
CDC42EP1-201ENST00000249014 KRTAP1-1Q07627 177 aa14.15□□□□□ -0.15
CDC42EP1-201ENST00000249014 CHCHD7Q9BUK0 85 aa14.15□□□□□ -0.15
CDC42EP1-201ENST00000249014 TRAV25A0A0B4J276 109 aa14.14□□□□□ -0.15
CDC42EP1-201ENST00000249014 IGHV3-30P01768 117 aa14.14□□□□□ -0.15
CDC42EP1-201ENST00000249014 IGHV3-30-5P0DP03 117 aa14.14□□□□□ -0.15
CDC42EP1-201ENST00000249014 CLUHP3Q96NS8 147 aa14.14□□□□□ -0.15
CDC42EP1-201ENST00000249014 SPXQ9BT56 116 aa14.14□□□□□ -0.15
CDC42EP1-201ENST00000249014 G3V4G9 280 aa14.13□□□□□ -0.15
CDC42EP1-201ENST00000249014 IGHV3-53P01767 116 aa14.13□□□□□ -0.15
CDC42EP1-201ENST00000249014 RNASE13Q5GAN3 156 aaKnown RBP14.13□□□□□ -0.15
CDC42EP1-201ENST00000249014 CITED2Q99967 270 aaPredicted RBP14.13□□□□□ -0.15
CDC42EP1-201ENST00000249014 STHQ8IWL8 128 aa14.13□□□□□ -0.15
CDC42EP1-201ENST00000249014 C1orf158Q8N1D5 194 aa14.13□□□□□ -0.15
CDC42EP1-201ENST00000249014 RS1O15537 224 aa14.12□□□□□ -0.15
CDC42EP1-201ENST00000249014 IGHV3OR16-12A0A075B7B8 117 aa14.12□□□□□ -0.15
CDC42EP1-201ENST00000249014 IGHV3-38A0A0C4DH36 116 aa14.12□□□□□ -0.15
CDC42EP1-201ENST00000249014 APOMO95445 188 aa14.11□□□□□ -0.15
CDC42EP1-201ENST00000249014 NIPBLQ6KC79 2804 aaeCLIP14.11□□□□□ -0.15
CDC42EP1-201ENST00000249014 MRPS36P82909 103 aaKnown RBP14.1□□□□□ -0.15
CDC42EP1-201ENST00000249014 WFDC2Q14508 124 aa14.1□□□□□ -0.15
CDC42EP1-201ENST00000249014 UBE2D4Q9Y2X8 147 aa14.1□□□□□ -0.15
CDC42EP1-201ENST00000249014 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.1□□□□□ -0.15
CDC42EP1-201ENST00000249014 IGKV2-29A2NJV5 120 aaPredicted RBP14.1□□□□□ -0.15
CDC42EP1-201ENST00000249014 TSPAN13O95857 204 aa14.1□□□□□ -0.15
CDC42EP1-201ENST00000249014 NDUFA11Q86Y39 141 aa14.1□□□□□ -0.15
CDC42EP1-201ENST00000249014 LINC01006Q8NI28 216 aa14.1□□□□□ -0.15
CDC42EP1-201ENST00000249014 ACANP16112 2415 aa14.1□□□□□ -0.15
CDC42EP1-201ENST00000249014 F8W1H4 67 aa14.09□□□□□ -0.15
CDC42EP1-201ENST00000249014 SETD2Q9BYW2 2564 aaPredicted RBP14.09□□□□□ -0.15
CDC42EP1-201ENST00000249014 TEX48A0A1B0GUV7 120 aa14.09□□□□□ -0.15
CDC42EP1-201ENST00000249014 CRYBA4P53673 196 aa14.09□□□□□ -0.15
CDC42EP1-201ENST00000249014 RPL24P83731 157 aaKnown RBP14.09□□□□□ -0.15
CDC42EP1-201ENST00000249014 MTURNQ8N3F0 131 aa14.09□□□□□ -0.15
CDC42EP1-201ENST00000249014 IL17DQ8TAD2 202 aa14.09□□□□□ -0.15
CDC42EP1-201ENST00000249014 CFC1BP0CG36 223 aa14.08□□□□□ -0.16
CDC42EP1-201ENST00000249014 CFC1P0CG37 223 aa14.08□□□□□ -0.16
CDC42EP1-201ENST00000249014 DNAJC30Q96LL9 226 aa14.08□□□□□ -0.16
CDC42EP1-201ENST00000249014 YAE1D1Q9NRH1 226 aa14.08□□□□□ -0.16
CDC42EP1-201ENST00000249014 SFTA2Q6UW10 78 aa14.07□□□□□ -0.16
CDC42EP1-201ENST00000249014 TSSC4Q9Y5U2 329 aaPredicted RBP14.07□□□□□ -0.16
CDC42EP1-201ENST00000249014 C10orf126Q8N4M7 172 aa14.07□□□□□ -0.16
CDC42EP1-201ENST00000249014 SPANXA1Q9NS26 97 aa14.07□□□□□ -0.16
CDC42EP1-201ENST00000249014 PRO0461Q9UI25 63 aa14.07□□□□□ -0.16
CDC42EP1-201ENST00000249014 SETXQ7Z333 2677 aaKnown RBP14.07□□□□□ -0.16
CDC42EP1-201ENST00000249014 IGHV3-30-3P0DP02 117 aa14.06□□□□□ -0.16
CDC42EP1-201ENST00000249014 TRGV1A0A0A0MS02 117 aa14.06□□□□□ -0.16
CDC42EP1-201ENST00000249014 TRAV8-3A0A0A6YYJ7 113 aa14.06□□□□□ -0.16
CDC42EP1-201ENST00000249014 Q6ZUT4 128 aa14.06□□□□□ -0.16
CDC42EP1-201ENST00000249014 COTL1Q14019 142 aa14.05□□□□□ -0.16
CDC42EP1-201ENST00000249014 ITPR2Q14571 2701 aa14.05□□□□□ -0.16
CDC42EP1-201ENST00000249014 TIMM21Q9BVV7 248 aa14.05□□□□□ -0.16
CDC42EP1-201ENST00000249014 ANK3Q12955 4377 aaKnown RBP14.05□□□□□ -0.16
CDC42EP1-201ENST00000249014 RNASE1P07998 156 aaKnown RBP14.05□□□□□ -0.16
CDC42EP1-201ENST00000249014 GAGE13Q4V321 117 aa14.05□□□□□ -0.16
CDC42EP1-201ENST00000249014 ADARB2-AS1A8MUL3 147 aa14.04□□□□□ -0.16
CDC42EP1-201ENST00000249014 C16orf95Q9H693 158 aa14.04□□□□□ -0.16
CDC42EP1-201ENST00000249014 UBE2D3P61077 147 aa14.03□□□□□ -0.16
CDC42EP1-201ENST00000249014 UBE2D2P62837 147 aa14.03□□□□□ -0.16
CDC42EP1-201ENST00000249014 LOC107984156A0A0G2JMH3 177 aa14.03□□□□□ -0.16
CDC42EP1-201ENST00000249014 A0A0J9YXY3 114 aa14.03□□□□□ -0.16
CDC42EP1-201ENST00000249014 Q6ZTI0 123 aa14.03□□□□□ -0.16
CDC42EP1-201ENST00000249014 SH2D6Q7Z4S9 175 aa14.03□□□□□ -0.16
CDC42EP1-201ENST00000249014 ARL17AQ8IVW1 177 aa14.03□□□□□ -0.16
CDC42EP1-201ENST00000249014 WFDC10AQ9H1F0 79 aa14.03□□□□□ -0.16
CDC42EP1-201ENST00000249014 MTORP42345 2549 aa14.03□□□□□ -0.16
CDC42EP1-201ENST00000249014 TINCRA0A1B0GVN0 87 aa14.02□□□□□ -0.16
CDC42EP1-201ENST00000249014 A4D1N5 150 aa14.02□□□□□ -0.16
CDC42EP1-201ENST00000249014 EIF4EBP3O60516 100 aaPredicted RBP14.02□□□□□ -0.16
CDC42EP1-201ENST00000249014 GIG44P09565 113 aaPredicted RBP14.02□□□□□ -0.16
CDC42EP1-201ENST00000249014 ETDBQ3ZM63 59 aa14.02□□□□□ -0.17
CDC42EP1-201ENST00000249014 IGHV1-58A0A0C4DH39 117 aa14.01□□□□□ -0.17
CDC42EP1-201ENST00000249014 MUSTN1Q8IVN3 82 aa14.01□□□□□ -0.17
CDC42EP1-201ENST00000249014 JMJD1CQ15652 2540 aa14.01□□□□□ -0.17
CDC42EP1-201ENST00000249014 A8MZ25 164 aa14□□□□□ -0.17
CDC42EP1-201ENST00000249014 TMEM263Q8WUH6 116 aaKnown RBP14□□□□□ -0.17
CDC42EP1-201ENST00000249014 PRO1854Q9UHT4 67 aa14□□□□□ -0.17
CDC42EP1-201ENST00000249014 KMT2BQ9UMN6 2715 aaPredicted RBP13.99□□□□□ -0.17
CDC42EP1-201ENST00000249014 SPINK8P0C7L1 97 aa13.99□□□□□ -0.17
CDC42EP1-201ENST00000249014 PSMB2P49721 201 aa13.99□□□□□ -0.17
CDC42EP1-201ENST00000249014 VSIG2Q96IQ7 327 aa13.99□□□□□ -0.17
CDC42EP1-201ENST00000249014 LITAFQ99732 161 aa13.99□□□□□ -0.17
CDC42EP1-201ENST00000249014 TMEM238C9JI98 176 aa13.99□□□□□ -0.17
CDC42EP1-201ENST00000249014 PLA2G2AP14555 144 aa13.98□□□□□ -0.17
CDC42EP1-201ENST00000249014 NOTCH3Q9UM47 2321 aa13.98□□□□□ -0.17
CDC42EP1-201ENST00000249014 IGLV1-51P01701 117 aa13.98□□□□□ -0.17
CDC42EP1-201ENST00000249014 SMCPP49901 116 aaPredicted RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms