RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 GAGE13Q4V321 117 aa13.27□□□□□ -0.29
TNFSF9-201ENST00000245817 RETNQ9HD89 108 aa13.27□□□□□ -0.29
TNFSF9-201ENST00000245817 TEX43Q6ZNM6 134 aa13.26□□□□□ -0.29
TNFSF9-201ENST00000245817 ERASQ7Z444 233 aa13.26□□□□□ -0.29
TNFSF9-201ENST00000245817 DAZ4Q86SG3 579 aaKnown RBP13.26□□□□□ -0.29
TNFSF9-201ENST00000245817 DAZ3Q9NR90 486 aaKnown RBP13.26□□□□□ -0.29
TNFSF9-201ENST00000245817 IGHV3-38A0A0C4DH36 116 aa13.25□□□□□ -0.29
TNFSF9-201ENST00000245817 VAMP8Q9BV40 100 aa13.25□□□□□ -0.29
TNFSF9-201ENST00000245817 LINC01545Q5VT33 79 aa13.24□□□□□ -0.29
TNFSF9-201ENST00000245817 K7EIL1 84 aa13.24□□□□□ -0.29
TNFSF9-201ENST00000245817 ATP5G1P05496 136 aa13.24□□□□□ -0.29
TNFSF9-201ENST00000245817 LGALS9CQ6DKI2 356 aa13.24□□□□□ -0.29
TNFSF9-201ENST00000245817 ATOH7Q8N100 152 aa13.24□□□□□ -0.29
TNFSF9-201ENST00000245817 C20orf203Q8NBC4 194 aa13.24□□□□□ -0.29
TNFSF9-201ENST00000245817 PRO0255Q9UI72 69 aa13.24□□□□□ -0.29
TNFSF9-201ENST00000245817 CELA1Q9UNI1 258 aa13.24□□□□□ -0.29
TNFSF9-201ENST00000245817 UBE2D3P61077 147 aa13.23□□□□□ -0.29
TNFSF9-201ENST00000245817 UBE2D2P62837 147 aa13.23□□□□□ -0.29
TNFSF9-201ENST00000245817 RPL39P62891 51 aaKnown RBP13.23□□□□□ -0.29
TNFSF9-201ENST00000245817 SBSPONQ8IVN8 264 aa13.22□□□□□ -0.29
TNFSF9-201ENST00000245817 TMEM141Q96I45 108 aa13.22□□□□□ -0.29
TNFSF9-201ENST00000245817 PMCHL2Q9BQD1 86 aa13.22□□□□□ -0.29
TNFSF9-201ENST00000245817 SPATA25Q9BR10 227 aa13.21□□□□□ -0.29
TNFSF9-201ENST00000245817 LOC100131303A0A0U1RQF7 123 aa13.21□□□□□ -0.3
TNFSF9-201ENST00000245817 PCP4L1A6NKN8 68 aa13.21□□□□□ -0.3
TNFSF9-201ENST00000245817 CRYBA4P53673 196 aa13.21□□□□□ -0.3
TNFSF9-201ENST00000245817 TIMM17AQ99595 171 aa13.21□□□□□ -0.3
TNFSF9-201ENST00000245817 HSBP1L1C9JCN9 74 aa13.2□□□□□ -0.3
TNFSF9-201ENST00000245817 PAX4O43316 350 aa13.2□□□□□ -0.3
TNFSF9-201ENST00000245817 MRAPQ8TCY5 172 aa13.2□□□□□ -0.3
TNFSF9-201ENST00000245817 C11orf68Q9H3H3 251 aaKnown RBP13.2□□□□□ -0.3
TNFSF9-201ENST00000245817 ZMAT4Q9H898 229 aa13.2□□□□□ -0.3
TNFSF9-201ENST00000245817 PAM16Q9Y3D7 125 aa13.2□□□□□ -0.3
TNFSF9-201ENST00000245817 IGIPA6NJ69 53 aa13.19□□□□□ -0.3
TNFSF9-201ENST00000245817 TSTD3H0UI37 97 aa13.19□□□□□ -0.3
TNFSF9-201ENST00000245817 ZNF664Q8N3J9 261 aa13.19□□□□□ -0.3
TNFSF9-201ENST00000245817 TRAV9-2A0A087WT02 112 aa13.18□□□□□ -0.3
TNFSF9-201ENST00000245817 TRAV12-1A0A0B4J245 112 aa13.18□□□□□ -0.3
TNFSF9-201ENST00000245817 F5H768 121 aa13.18□□□□□ -0.3
TNFSF9-201ENST00000245817 GYPEP15421 78 aa13.18□□□□□ -0.3
TNFSF9-201ENST00000245817 PKIAP61925 76 aa13.18□□□□□ -0.3
TNFSF9-201ENST00000245817 CHCHD7Q9BUK0 85 aa13.18□□□□□ -0.3
TNFSF9-201ENST00000245817 A0A087WX48 190 aa13.18□□□□□ -0.3
TNFSF9-201ENST00000245817 HTN3P15516 51 aa13.18□□□□□ -0.3
TNFSF9-201ENST00000245817 DEFA6Q01524 100 aa13.18□□□□□ -0.3
TNFSF9-201ENST00000245817 ODF1Q14990 250 aa13.18□□□□□ -0.3
TNFSF9-201ENST00000245817 BAALCQ8WXS3 180 aa13.18□□□□□ -0.3
TNFSF9-201ENST00000245817 SPATA45Q537H7 98 aa13.17□□□□□ -0.3
TNFSF9-201ENST00000245817 PAPPA-AS1Q5QFB9 102 aa13.17□□□□□ -0.3
TNFSF9-201ENST00000245817 GTSF1LQ9H1H1 148 aa13.17□□□□□ -0.3
TNFSF9-201ENST00000245817 TMEM97Q5BJF2 176 aa13.16□□□□□ -0.3
TNFSF9-201ENST00000245817 PRO1933Q9H354 126 aa13.16□□□□□ -0.3
TNFSF9-201ENST00000245817 NBEAL2Q6ZNJ1 2754 aa13.15□□□□□ -0.3
TNFSF9-201ENST00000245817 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.15□□□□□ -0.3
TNFSF9-201ENST00000245817 IGKV2-29A2NJV5 120 aaPredicted RBP13.15□□□□□ -0.3
TNFSF9-201ENST00000245817 SMAGPQ0VAQ4 97 aa13.15□□□□□ -0.3
TNFSF9-201ENST00000245817 TM2D3Q9BRN9 247 aa13.15□□□□□ -0.3
TNFSF9-201ENST00000245817 SPANXA1Q9NS26 97 aa13.15□□□□□ -0.3
TNFSF9-201ENST00000245817 CHTOPQ9Y3Y2 248 aaKnown RBP13.15□□□□□ -0.3
TNFSF9-201ENST00000245817 PYGO1Q9Y3Y4 419 aa13.15□□□□□ -0.3
TNFSF9-201ENST00000245817 A0A0J9YWU9 116 aa13.15□□□□□ -0.31
TNFSF9-201ENST00000245817 A0A0J9YY99 117 aa13.15□□□□□ -0.31
TNFSF9-201ENST00000245817 DPM2O94777 84 aa13.15□□□□□ -0.31
TNFSF9-201ENST00000245817 IGKCP01834 107 aa13.15□□□□□ -0.31
TNFSF9-201ENST00000245817 PMVKQ15126 192 aa13.15□□□□□ -0.31
TNFSF9-201ENST00000245817 C12orf74Q32Q52 190 aa13.15□□□□□ -0.31
TNFSF9-201ENST00000245817 ATP6V0E2Q8NHE4 81 aa13.15□□□□□ -0.31
TNFSF9-201ENST00000245817 TRBV25-1A0A075B6N4 114 aa13.14□□□□□ -0.31
TNFSF9-201ENST00000245817 PRSS29PA6NIE9 313 aa13.14□□□□□ -0.31
TNFSF9-201ENST00000245817 UBE2L6O14933 153 aa13.14□□□□□ -0.31
TNFSF9-201ENST00000245817 MRPL35Q9NZE8 188 aaKnown RBP13.14□□□□□ -0.31
TNFSF9-201ENST00000245817 NPSP0C0P6 89 aa13.13□□□□□ -0.31
TNFSF9-201ENST00000245817 MAJINQ3KP22 176 aa13.13□□□□□ -0.31
TNFSF9-201ENST00000245817 DGAT2L7PQ6IED9 249 aa13.13□□□□□ -0.31
TNFSF9-201ENST00000245817 TMEM243Q9BU79 118 aa13.13□□□□□ -0.31
TNFSF9-201ENST00000245817 VCX2Q9H322 139 aa13.13□□□□□ -0.31
TNFSF9-201ENST00000245817 TRAV26-1A0A087WT03 109 aa13.12□□□□□ -0.31
TNFSF9-201ENST00000245817 hDV102S1A0JD36 115 aa13.12□□□□□ -0.31
TNFSF9-201ENST00000245817 F8VRH5 84 aa13.12□□□□□ -0.31
TNFSF9-201ENST00000245817 LINC00694P0DN24 101 aa13.12□□□□□ -0.31
TNFSF9-201ENST00000245817 PLNP26678 52 aa13.12□□□□□ -0.31
TNFSF9-201ENST00000245817 NTM-AS1Q6ZSK4 140 aa13.12□□□□□ -0.31
TNFSF9-201ENST00000245817 UBE2D4Q9Y2X8 147 aa13.12□□□□□ -0.31
TNFSF9-201ENST00000245817 C11orf45Q8TAV5 145 aa13.12□□□□□ -0.31
TNFSF9-201ENST00000245817 CST9LQ9H4G1 147 aa13.12□□□□□ -0.31
TNFSF9-201ENST00000245817 IGLV4-3A0A075B6K6 122 aa13.11□□□□□ -0.31
TNFSF9-201ENST00000245817 VSIG2Q96IQ7 327 aa13.11□□□□□ -0.31
TNFSF9-201ENST00000245817 OPRPNQ99935 248 aaPredicted RBP13.11□□□□□ -0.31
TNFSF9-201ENST00000245817 TRBV6-8A0A0A6YYG3 113 aa13.1□□□□□ -0.31
TNFSF9-201ENST00000245817 AMMECR1LQ6DCA0 310 aa13.1□□□□□ -0.31
TNFSF9-201ENST00000245817 TIMM21Q9BVV7 248 aa13.1□□□□□ -0.31
TNFSF9-201ENST00000245817 H7C423 109 aa13.09□□□□□ -0.31
TNFSF9-201ENST00000245817 MRPL23Q16540 153 aaKnown RBP13.09□□□□□ -0.31
TNFSF9-201ENST00000245817 CEMP1Q6PRD7 247 aaPredicted RBP13.09□□□□□ -0.31
TNFSF9-201ENST00000245817 SH2D6Q7Z4S9 175 aa13.08□□□□□ -0.31
TNFSF9-201ENST00000245817 ICOSQ9Y6W8 199 aa13.08□□□□□ -0.31
TNFSF9-201ENST00000245817 A0A096LPF7 62 aa13.08□□□□□ -0.32
TNFSF9-201ENST00000245817 FGF6P10767 208 aa13.08□□□□□ -0.32
TNFSF9-201ENST00000245817 ZC2HC1BQ5TFG8 222 aa13.08□□□□□ -0.32
TNFSF9-201ENST00000245817 Q6ZTC4 211 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 1555.6 ms