RNA–Protein interactions for RNA: ENST00000244815.9

LRRFIP1-201, Transcript of LRR binding FLII interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LRRFIP1, Length 4,370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-201ENST00000244815 TRAV26-1A0A087WT03 109 aa12.02□□□□□ -0.49
LRRFIP1-201ENST00000244815 IGKV3D-7A0A0C4DH55 119 aa12.02□□□□□ -0.49
LRRFIP1-201ENST00000244815 TNFRSF13BO14836 293 aaPredicted RBP12.02□□□□□ -0.49
LRRFIP1-201ENST00000244815 SMIM20Q8N5G0 67 aa12.02□□□□□ -0.49
LRRFIP1-201ENST00000244815 Q8N976 141 aa12.02□□□□□ -0.49
LRRFIP1-201ENST00000244815 ESM1Q9NQ30 184 aa12.02□□□□□ -0.49
LRRFIP1-201ENST00000244815 SPANXB1Q9NS25 103 aaPredicted RBP12.02□□□□□ -0.49
LRRFIP1-201ENST00000244815 K7EQG2 157 aa12.02□□□□□ -0.49
LRRFIP1-201ENST00000244815 A0A0B4J2C4 111 aa12.02□□□□□ -0.49
LRRFIP1-201ENST00000244815 LECT2O14960 151 aa12.01□□□□□ -0.49
LRRFIP1-201ENST00000244815 C11orf21Q9P2W6 132 aa12.01□□□□□ -0.49
LRRFIP1-201ENST00000244815 COX7A2LO14548 114 aa12.01□□□□□ -0.49
LRRFIP1-201ENST00000244815 GAS8-AS1O95177 125 aa12.01□□□□□ -0.49
LRRFIP1-201ENST00000244815 SPTBN4Q9H254 2564 aa12.01□□□□□ -0.49
LRRFIP1-201ENST00000244815 PRB1P04280 392 aa12□□□□□ -0.49
LRRFIP1-201ENST00000244815 MIAQ16674 131 aa12□□□□□ -0.49
LRRFIP1-201ENST00000244815 URB1-AS1Q96HZ7 61 aa12□□□□□ -0.49
LRRFIP1-201ENST00000244815 ZNF22P17026 224 aaPredicted RBP12□□□□□ -0.49
LRRFIP1-201ENST00000244815 NFE4Q86UQ8 179 aa12□□□□□ -0.49
LRRFIP1-201ENST00000244815 TRBV10-1A0A0K0K1A3 114 aa11.99□□□□□ -0.49
LRRFIP1-201ENST00000244815 CDKN2A-AS1Q9UH64 79 aa11.99□□□□□ -0.49
LRRFIP1-201ENST00000244815 TNRC6BQ9UPQ9 1833 aaKnown RBP11.99□□□□□ -0.49
LRRFIP1-201ENST00000244815 NRACQ8N912 160 aa11.99□□□□□ -0.49
LRRFIP1-201ENST00000244815 RBMY1FQ15415 496 aaKnown RBP11.98□□□□□ -0.49
LRRFIP1-201ENST00000244815 HHLA3Q9XRX5 114 aa11.98□□□□□ -0.49
LRRFIP1-201ENST00000244815 MAP6D1Q9H9H5 199 aa11.98□□□□□ -0.49
LRRFIP1-201ENST00000244815 PTPRSQ13332 1948 aa11.98□□□□□ -0.49
LRRFIP1-201ENST00000244815 IGLV4-3A0A075B6K6 122 aa11.97□□□□□ -0.49
LRRFIP1-201ENST00000244815 C19orf84I3L1E1 186 aa11.97□□□□□ -0.49
LRRFIP1-201ENST00000244815 ODF3Q96PU9 254 aa11.97□□□□□ -0.49
LRRFIP1-201ENST00000244815 MT-ATP8P03928 68 aa11.97□□□□□ -0.49
LRRFIP1-201ENST00000244815 A0A1B0GX51 115 aa11.97□□□□□ -0.49
LRRFIP1-201ENST00000244815 M0QY20 66 aa11.97□□□□□ -0.49
LRRFIP1-201ENST00000244815 MRPL23Q16540 153 aaKnown RBP11.97□□□□□ -0.49
LRRFIP1-201ENST00000244815 IGHV4-4A0A075B6R2 117 aa11.96□□□□□ -0.49
LRRFIP1-201ENST00000244815 Q8N6K4 173 aa11.96□□□□□ -0.49
LRRFIP1-201ENST00000244815 IGKV2D-24A0A075B6R9 120 aa11.96□□□□□ -0.49
LRRFIP1-201ENST00000244815 ATP5G1P05496 136 aa11.96□□□□□ -0.49
LRRFIP1-201ENST00000244815 TMEM263Q8WUH6 116 aaKnown RBP11.96□□□□□ -0.5
LRRFIP1-201ENST00000244815 Q9HAA7 133 aa11.95□□□□□ -0.5
LRRFIP1-201ENST00000244815 TEX49A0A1B0GTD5 131 aa11.95□□□□□ -0.5
LRRFIP1-201ENST00000244815 J3QKU1 62 aa11.95□□□□□ -0.5
LRRFIP1-201ENST00000244815 Q6ZTI0 123 aa11.95□□□□□ -0.5
LRRFIP1-201ENST00000244815 TRBV27A0A0K0K1C4 114 aa11.95□□□□□ -0.5
LRRFIP1-201ENST00000244815 PRR9Q5T870 116 aa11.95□□□□□ -0.5
LRRFIP1-201ENST00000244815 ATOX1O00244 68 aa11.94□□□□□ -0.5
LRRFIP1-201ENST00000244815 CAMK2N2Q96S95 79 aa11.94□□□□□ -0.5
LRRFIP1-201ENST00000244815 LINC00467Q9BRT7 94 aa11.94□□□□□ -0.5
LRRFIP1-201ENST00000244815 LRP4O75096 1905 aa11.94□□□□□ -0.5
LRRFIP1-201ENST00000244815 RNASE3P12724 160 aaKnown RBP11.94□□□□□ -0.5
LRRFIP1-201ENST00000244815 CITED2Q99967 270 aaPredicted RBP11.94□□□□□ -0.5
LRRFIP1-201ENST00000244815 TMEM223A0PJW6 202 aa11.94□□□□□ -0.5
LRRFIP1-201ENST00000244815 CDK2AP2O75956 126 aa11.94□□□□□ -0.5
LRRFIP1-201ENST00000244815 C11orf71Q6IPW1 123 aa11.94□□□□□ -0.5
LRRFIP1-201ENST00000244815 C4orf3Q8WVX3 66 aa11.94□□□□□ -0.5
LRRFIP1-201ENST00000244815 CITED1Q99966 193 aa11.94□□□□□ -0.5
LRRFIP1-201ENST00000244815 MTORP42345 2549 aa11.93□□□□□ -0.5
LRRFIP1-201ENST00000244815 SPART-AS1P0CW21 52 aa11.93□□□□□ -0.5
LRRFIP1-201ENST00000244815 C1orf43Q9BWL3 253 aa11.93□□□□□ -0.5
LRRFIP1-201ENST00000244815 PRRC2AP48634 2157 aaKnown RBP11.93□□□□□ -0.5
LRRFIP1-201ENST00000244815 IGHV3-33P01772 117 aa11.93□□□□□ -0.5
LRRFIP1-201ENST00000244815 DEFB105AQ8NG35 78 aa11.93□□□□□ -0.5
LRRFIP1-201ENST00000244815 RNF183Q96D59 192 aa11.93□□□□□ -0.5
LRRFIP1-201ENST00000244815 CNFNQ9BYD5 112 aa11.93□□□□□ -0.5
LRRFIP1-201ENST00000244815 C10orf99Q6UWK7 81 aa11.92□□□□□ -0.5
LRRFIP1-201ENST00000244815 LRRK2Q5S007 2527 aa11.92□□□□□ -0.5
LRRFIP1-201ENST00000244815 RBM3P98179 157 aaKnown RBP11.91□□□□□ -0.5
LRRFIP1-201ENST00000244815 JMJD7-PLA2G4BH0Y9G9 81 aa11.91□□□□□ -0.5
LRRFIP1-201ENST00000244815 DEFB4AO15263 64 aa11.91□□□□□ -0.5
LRRFIP1-201ENST00000244815 PCNTO95613 3336 aa11.91□□□□□ -0.5
LRRFIP1-201ENST00000244815 hADV29S1A0JD25 119 aa11.91□□□□□ -0.5
LRRFIP1-201ENST00000244815 HIST2H2BDQ6DRA6 164 aa11.91□□□□□ -0.5
LRRFIP1-201ENST00000244815 LINC00643Q86TS7 51 aa11.91□□□□□ -0.5
LRRFIP1-201ENST00000244815 IGHV3-30P01768 117 aa11.9□□□□□ -0.5
LRRFIP1-201ENST00000244815 IGHV3-30-5P0DP03 117 aa11.9□□□□□ -0.5
LRRFIP1-201ENST00000244815 PROK1P58294 105 aa11.9□□□□□ -0.5
LRRFIP1-201ENST00000244815 C9orf66Q5T8R8 295 aa11.9□□□□□ -0.5
LRRFIP1-201ENST00000244815 TRBV6-5A0A0K0K1A5 114 aa11.9□□□□□ -0.5
LRRFIP1-201ENST00000244815 TRIAP1O43715 76 aa11.9□□□□□ -0.51
LRRFIP1-201ENST00000244815 POLR2KP53803 58 aaKnown RBP11.9□□□□□ -0.51
LRRFIP1-201ENST00000244815 SPANXCQ9NY87 97 aa11.9□□□□□ -0.51
LRRFIP1-201ENST00000244815 MRPS12O15235 138 aaKnown RBP11.89□□□□□ -0.51
LRRFIP1-201ENST00000244815 DEFB135Q30KP9 77 aa11.89□□□□□ -0.51
LRRFIP1-201ENST00000244815 PRO0255Q9UI72 69 aa11.89□□□□□ -0.51
LRRFIP1-201ENST00000244815 SPAG11BQ08648 103 aa11.89□□□□□ -0.51
LRRFIP1-201ENST00000244815 DEFB114Q30KQ6 69 aa11.88□□□□□ -0.51
LRRFIP1-201ENST00000244815 C14orf132Q9NPU4 83 aa11.88□□□□□ -0.51
LRRFIP1-201ENST00000244815 KLK12Q9UKR0 248 aa11.88□□□□□ -0.51
LRRFIP1-201ENST00000244815 RMI2Q96E14 147 aa11.88□□□□□ -0.51
LRRFIP1-201ENST00000244815 CLPSL1A2RUU4 121 aa11.87□□□□□ -0.51
LRRFIP1-201ENST00000244815 NDUFV3P56181 108 aaKnown RBP11.87□□□□□ -0.51
LRRFIP1-201ENST00000244815 LINC00308Q8TCZ7 52 aa11.87□□□□□ -0.51
LRRFIP1-201ENST00000244815 A8MZ25 164 aa11.87□□□□□ -0.51
LRRFIP1-201ENST00000244815 NCR3O14931 201 aa11.87□□□□□ -0.51
LRRFIP1-201ENST00000244815 CXCL5P42830 114 aa11.87□□□□□ -0.51
LRRFIP1-201ENST00000244815 ZMAT4Q9H898 229 aa11.87□□□□□ -0.51
LRRFIP1-201ENST00000244815 KLLNB2CW77 178 aa11.86□□□□□ -0.51
LRRFIP1-201ENST00000244815 CPAMD8Q8IZJ3 1885 aa11.86□□□□□ -0.51
LRRFIP1-201ENST00000244815 TRBV30A0A0K0K1B3 111 aa11.86□□□□□ -0.51
LRRFIP1-201ENST00000244815 Q6ZS46 218 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms