RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 ABCA12Q86UK0 2595 aa6.27□□□□□ -1.41
APOB-201ENST00000233242 BLCAPP62952 87 aa6.27□□□□□ -1.41
APOB-201ENST00000233242 RITA1Q96K30 269 aa6.27□□□□□ -1.41
APOB-201ENST00000233242 FN1P02751 2386 aaKnown RBP6.27□□□□□ -1.41
APOB-201ENST00000233242 USP17L23D6RBM5 183 aa6.27□□□□□ -1.41
APOB-201ENST00000233242 LST1O00453 97 aa6.27□□□□□ -1.41
APOB-201ENST00000233242 TIRAPP58753 221 aa6.27□□□□□ -1.41
APOB-201ENST00000233242 KIAA1549LQ6ZVL6 1849 aa6.27□□□□□ -1.41
APOB-201ENST00000233242 LINC00308Q8TCZ7 52 aa6.26□□□□□ -1.41
APOB-201ENST00000233242 MUC4Q99102 2169 aa6.26□□□□□ -1.41
APOB-201ENST00000233242 Q8N9W7 124 aa6.26□□□□□ -1.41
APOB-201ENST00000233242 K7ENP7 123 aa6.26□□□□□ -1.41
APOB-201ENST00000233242 IGKV2D-24A0A075B6R9 120 aa6.26□□□□□ -1.41
APOB-201ENST00000233242 IGKV2D-26A0A0A0MRZ7 120 aa6.26□□□□□ -1.41
APOB-201ENST00000233242 Q6ZQT7 251 aa6.26□□□□□ -1.41
APOB-201ENST00000233242 SPTSSBQ8NFR3 76 aa6.26□□□□□ -1.41
APOB-201ENST00000233242 IGHV4-28A0A0C4DH34 117 aa6.26□□□□□ -1.41
APOB-201ENST00000233242 CLPSL1A2RUU4 121 aa6.26□□□□□ -1.41
APOB-201ENST00000233242 XGP55808 180 aa6.26□□□□□ -1.41
APOB-201ENST00000233242 IGHV4-4A0A075B6R2 117 aa6.26□□□□□ -1.41
APOB-201ENST00000233242 A0A0J9YX75 114 aa6.26□□□□□ -1.41
APOB-201ENST00000233242 CCDC179H3BU77 68 aa6.26□□□□□ -1.41
APOB-201ENST00000233242 EIF4EBP1Q13541 118 aaPredicted RBP6.26□□□□□ -1.41
APOB-201ENST00000233242 PYGO1Q9Y3Y4 419 aa6.26□□□□□ -1.41
APOB-201ENST00000233242 SMIM26A0A096LP01 95 aa6.25□□□□□ -1.41
APOB-201ENST00000233242 MRPS12O15235 138 aaKnown RBP6.25□□□□□ -1.41
APOB-201ENST00000233242 MYCNOSP40205 109 aa6.25□□□□□ -1.41
APOB-201ENST00000233242 ENHOQ6UWT2 76 aa6.25□□□□□ -1.41
APOB-201ENST00000233242 F8P00451 2351 aa6.25□□□□□ -1.41
APOB-201ENST00000233242 TMEM263Q8WUH6 116 aaKnown RBP6.25□□□□□ -1.41
APOB-201ENST00000233242 GNLYP22749 145 aa6.25□□□□□ -1.41
APOB-201ENST00000233242 SPRY2O43597 315 aa6.25□□□□□ -1.41
APOB-201ENST00000233242 Q6JHZ5 121 aa6.25□□□□□ -1.41
APOB-201ENST00000233242 SPAG11BQ08648 103 aa6.25□□□□□ -1.41
APOB-201ENST00000233242 SEC61GP60059 68 aa6.25□□□□□ -1.41
APOB-201ENST00000233242 CGB3P0DN86 165 aa6.25□□□□□ -1.41
APOB-201ENST00000233242 CGB7P0DN87 165 aa6.25□□□□□ -1.41
APOB-201ENST00000233242 LY6DQ14210 128 aa6.25□□□□□ -1.41
APOB-201ENST00000233242 CLUHP3Q96NS8 147 aa6.25□□□□□ -1.41
APOB-201ENST00000233242 CCL24O00175 119 aa6.24□□□□□ -1.41
APOB-201ENST00000233242 PRB1P04280 392 aa6.24□□□□□ -1.41
APOB-201ENST00000233242 FAM19A3Q7Z5A8 133 aa6.24□□□□□ -1.41
APOB-201ENST00000233242 TRBV27A0A0K0K1C4 114 aa6.24□□□□□ -1.41
APOB-201ENST00000233242 NCR3O14931 201 aa6.24□□□□□ -1.41
APOB-201ENST00000233242 LINC00526Q96FQ7 95 aa6.24□□□□□ -1.41
APOB-201ENST00000233242 MAPKAPK5-AS1Q8N8E1 139 aa6.24□□□□□ -1.41
APOB-201ENST00000233242 IGFL2Q6UWQ7 119 aa6.24□□□□□ -1.41
APOB-201ENST00000233242 SPART-AS1P0CW21 52 aa6.24□□□□□ -1.41
APOB-201ENST00000233242 ZNF80P51504 273 aaPredicted RBP6.24□□□□□ -1.41
APOB-201ENST00000233242 MPLKIPQ8TAP9 179 aa6.23□□□□□ -1.41
APOB-201ENST00000233242 RNF223E7ERA6 249 aa6.23□□□□□ -1.41
APOB-201ENST00000233242 BRWD1-AS2P59051 145 aa6.23□□□□□ -1.41
APOB-201ENST00000233242 HHLA3Q9XRX5 114 aa6.23□□□□□ -1.41
APOB-201ENST00000233242 FSTL3O95633 263 aa6.23□□□□□ -1.41
APOB-201ENST00000233242 RNF185Q96GF1 192 aa6.23□□□□□ -1.41
APOB-201ENST00000233242 SERP1Q9Y6X1 66 aa6.23□□□□□ -1.41
APOB-201ENST00000233242 PIK3CD-AS1Q5SR53 167 aa6.23□□□□□ -1.41
APOB-201ENST00000233242 E7EUB6 86 aa6.23□□□□□ -1.41
APOB-201ENST00000233242 CNFNQ9BYD5 112 aa6.23□□□□□ -1.41
APOB-201ENST00000233242 SP5Q6BEB4 398 aaPredicted RBP6.23□□□□□ -1.41
APOB-201ENST00000233242 C1orf195Q5TG92 126 aa6.23□□□□□ -1.41
APOB-201ENST00000233242 IGLV4-3A0A075B6K6 122 aa6.22□□□□□ -1.41
APOB-201ENST00000233242 A0A096LPF7 62 aa6.22□□□□□ -1.41
APOB-201ENST00000233242 PRR15LQ9BU68 103 aa6.22□□□□□ -1.41
APOB-201ENST00000233242 ZMAT4Q9H898 229 aa6.22□□□□□ -1.41
APOB-201ENST00000233242 TRBV6-5A0A0K0K1A5 114 aa6.22□□□□□ -1.41
APOB-201ENST00000233242 ZFAND2AQ8N6M9 145 aa6.22□□□□□ -1.41
APOB-201ENST00000233242 A0A0U1RQV1 116 aa6.22□□□□□ -1.41
APOB-201ENST00000233242 SMIM9A6NGZ8 99 aa6.22□□□□□ -1.41
APOB-201ENST00000233242 IGLV2-11P01706 119 aa6.22□□□□□ -1.41
APOB-201ENST00000233242 IGLV10-54A0A075B6I4 117 aa6.22□□□□□ -1.41
APOB-201ENST00000233242 M0QXV9 152 aa6.22□□□□□ -1.41
APOB-201ENST00000233242 DKK4Q9UBT3 224 aa6.22□□□□□ -1.41
APOB-201ENST00000233242 M0QY20 66 aa6.22□□□□□ -1.41
APOB-201ENST00000233242 CDKN2A-AS1Q9UH64 79 aa6.22□□□□□ -1.41
APOB-201ENST00000233242 JMJD1CQ15652 2540 aa6.21□□□□□ -1.41
APOB-201ENST00000233242 IGF2-ASQ6U949 168 aa6.21□□□□□ -1.41
APOB-201ENST00000233242 MUC7Q8TAX7 377 aa6.21□□□□□ -1.41
APOB-201ENST00000233242 CRIP3Q6Q6R5 217 aa6.21□□□□□ -1.42
APOB-201ENST00000233242 IGHV4OR15-8A0A075B7B6 117 aa6.21□□□□□ -1.42
APOB-201ENST00000233242 A0A087WW49 117 aa6.21□□□□□ -1.42
APOB-201ENST00000233242 IGHV4-59P01825 116 aa6.2□□□□□ -1.42
APOB-201ENST00000233242 Q6ZPA2 131 aa6.2□□□□□ -1.42
APOB-201ENST00000233242 CCDC140Q96MF4 163 aa6.2□□□□□ -1.42
APOB-201ENST00000233242 SPRNQ5BIV9 151 aa6.2□□□□□ -1.42
APOB-201ENST00000233242 NRACQ8N912 160 aa6.2□□□□□ -1.42
APOB-201ENST00000233242 SLURP1P55000 103 aa6.2□□□□□ -1.42
APOB-201ENST00000233242 COL4A3Q01955 1670 aa6.2□□□□□ -1.42
APOB-201ENST00000233242 LINC00310P59036 64 aa6.2□□□□□ -1.42
APOB-201ENST00000233242 SEM1Q6ZVN7 128 aa6.2□□□□□ -1.42
APOB-201ENST00000233242 C4orf3Q8WVX3 66 aa6.2□□□□□ -1.42
APOB-201ENST00000233242 PRO0255Q9UI72 69 aa6.2□□□□□ -1.42
APOB-201ENST00000233242 APRG1Q8IVJ8 170 aa6.2□□□□□ -1.42
APOB-201ENST00000233242 IGF2RP11717 2491 aa6.2□□□□□ -1.42
APOB-201ENST00000233242 DEFB112Q30KQ8 113 aa6.19□□□□□ -1.42
APOB-201ENST00000233242 DEFB121Q5J5C9 76 aa6.19□□□□□ -1.42
APOB-201ENST00000233242 Q8N976 141 aa6.19□□□□□ -1.42
APOB-201ENST00000233242 PRB2P02812 416 aaPredicted RBP6.19□□□□□ -1.42
APOB-201ENST00000233242 UBE2AP49459 152 aa6.19□□□□□ -1.42
APOB-201ENST00000233242 C9orf66Q5T8R8 295 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms