RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 NDUFA11Q86Y39 141 aa8.67□□□□□ -1.02
TNFAIP1-201ENST00000226225 MRPL53Q96EL3 112 aaKnown RBP8.67□□□□□ -1.02
TNFAIP1-201ENST00000226225 XCL2Q9UBD3 114 aa8.67□□□□□ -1.02
TNFAIP1-201ENST00000226225 SUMO2P61956 95 aaKnown RBP8.67□□□□□ -1.02
TNFAIP1-201ENST00000226225 RBAKDNA6NC62 111 aa8.67□□□□□ -1.02
TNFAIP1-201ENST00000226225 C9JAW5 83 aa8.67□□□□□ -1.02
TNFAIP1-201ENST00000226225 GNRH2O43555 120 aa8.67□□□□□ -1.02
TNFAIP1-201ENST00000226225 KRTAP10-3P60369 221 aa8.67□□□□□ -1.02
TNFAIP1-201ENST00000226225 LINC01559Q495D7 138 aa8.67□□□□□ -1.02
TNFAIP1-201ENST00000226225 BAALCQ8WXS3 180 aa8.67□□□□□ -1.02
TNFAIP1-201ENST00000226225 CARD19Q96LW7 228 aa8.67□□□□□ -1.02
TNFAIP1-201ENST00000226225 JPT2Q9H910 190 aa8.67□□□□□ -1.02
TNFAIP1-201ENST00000226225 A0A087WWL8 130 aa8.66□□□□□ -1.02
TNFAIP1-201ENST00000226225 A6NJY4 79 aa8.66□□□□□ -1.02
TNFAIP1-201ENST00000226225 ANKRD29Q8N6D5 301 aa8.66□□□□□ -1.02
TNFAIP1-201ENST00000226225 SOCS3O14543 225 aa8.66□□□□□ -1.02
TNFAIP1-201ENST00000226225 NPC2P61916 151 aa8.66□□□□□ -1.02
TNFAIP1-201ENST00000226225 A8MWV9 139 aa8.66□□□□□ -1.02
TNFAIP1-201ENST00000226225 RASL10AQ92737 203 aa8.66□□□□□ -1.02
TNFAIP1-201ENST00000226225 WFDC10AQ9H1F0 79 aa8.66□□□□□ -1.02
TNFAIP1-201ENST00000226225 ZNF256Q9Y2P7 627 aaPredicted RBP8.66□□□□□ -1.02
TNFAIP1-201ENST00000226225 TRAV2A0A0B4J234 112 aa8.65□□□□□ -1.02
TNFAIP1-201ENST00000226225 A0A0J9YX75 114 aa8.65□□□□□ -1.02
TNFAIP1-201ENST00000226225 ADARB2-AS1A8MUL3 147 aa8.65□□□□□ -1.02
TNFAIP1-201ENST00000226225 TAL2Q16559 108 aa8.65□□□□□ -1.02
TNFAIP1-201ENST00000226225 OPRPNQ99935 248 aaPredicted RBP8.65□□□□□ -1.02
TNFAIP1-201ENST00000226225 NBEAL2Q6ZNJ1 2754 aa8.65□□□□□ -1.02
TNFAIP1-201ENST00000226225 C11orf86A6NJI1 115 aa8.65□□□□□ -1.02
TNFAIP1-201ENST00000226225 LINC01587Q99440 93 aa8.65□□□□□ -1.02
TNFAIP1-201ENST00000226225 TENM1Q9UKZ4 2725 aa8.65□□□□□ -1.03
TNFAIP1-201ENST00000226225 TP53TG1Q9Y2A0 90 aa8.65□□□□□ -1.03
TNFAIP1-201ENST00000226225 ASIPP42127 132 aa8.64□□□□□ -1.03
TNFAIP1-201ENST00000226225 MAP6D1Q9H9H5 199 aa8.64□□□□□ -1.03
TNFAIP1-201ENST00000226225 PPDPFLQ8WWR9 84 aa8.63□□□□□ -1.03
TNFAIP1-201ENST00000226225 ORMDL2Q53FV1 153 aa8.63□□□□□ -1.03
TNFAIP1-201ENST00000226225 NEXN-AS1Q8NBZ9 246 aa8.63□□□□□ -1.03
TNFAIP1-201ENST00000226225 KRTAP24-1Q3LI83 254 aa8.63□□□□□ -1.03
TNFAIP1-201ENST00000226225 ZFAND2AQ8N6M9 145 aa8.63□□□□□ -1.03
TNFAIP1-201ENST00000226225 PRM2P04554 102 aa8.62□□□□□ -1.03
TNFAIP1-201ENST00000226225 PRSS2P07478 247 aa8.62□□□□□ -1.03
TNFAIP1-201ENST00000226225 ZFAND6Q6FIF0 208 aa8.62□□□□□ -1.03
TNFAIP1-201ENST00000226225 CNFNQ9BYD5 112 aa8.62□□□□□ -1.03
TNFAIP1-201ENST00000226225 TEN1Q86WV5 123 aa8.62□□□□□ -1.03
TNFAIP1-201ENST00000226225 TSPEAR-AS2P59090 65 aa8.62□□□□□ -1.03
TNFAIP1-201ENST00000226225 IGHV3-73A0A0B4J1V6 119 aa8.61□□□□□ -1.03
TNFAIP1-201ENST00000226225 CFC1BP0CG36 223 aa8.61□□□□□ -1.03
TNFAIP1-201ENST00000226225 CFC1P0CG37 223 aa8.61□□□□□ -1.03
TNFAIP1-201ENST00000226225 ANK3Q12955 4377 aaKnown RBP8.61□□□□□ -1.03
TNFAIP1-201ENST00000226225 TOMM6Q96B49 74 aa8.61□□□□□ -1.03
TNFAIP1-201ENST00000226225 H3BMM0 161 aa8.61□□□□□ -1.03
TNFAIP1-201ENST00000226225 NTN5Q8WTR8 489 aaPredicted RBP8.61□□□□□ -1.03
TNFAIP1-201ENST00000226225 LENEPQ9Y5L5 61 aa8.61□□□□□ -1.03
TNFAIP1-201ENST00000226225 NOTCH1P46531 2555 aa8.6□□□□□ -1.03
TNFAIP1-201ENST00000226225 SLC25A20O43772 301 aa8.6□□□□□ -1.03
TNFAIP1-201ENST00000226225 LGALS3P17931 250 aaKnown RBP8.6□□□□□ -1.03
TNFAIP1-201ENST00000226225 HERVK_113P61574 105 aa8.6□□□□□ -1.03
TNFAIP1-201ENST00000226225 ODF3L2Q3SX64 289 aa8.6□□□□□ -1.03
TNFAIP1-201ENST00000226225 DPH3P1Q9H4G8 78 aa8.6□□□□□ -1.03
TNFAIP1-201ENST00000226225 TRAV4A0A0B4J268 109 aa8.6□□□□□ -1.03
TNFAIP1-201ENST00000226225 A4D1N5 150 aa8.6□□□□□ -1.03
TNFAIP1-201ENST00000226225 SNCGO76070 127 aa8.6□□□□□ -1.03
TNFAIP1-201ENST00000226225 A0A0J9YY99 117 aa8.59□□□□□ -1.03
TNFAIP1-201ENST00000226225 RNASE13Q5GAN3 156 aaKnown RBP8.59□□□□□ -1.03
TNFAIP1-201ENST00000226225 ERG28Q9UKR5 140 aa8.59□□□□□ -1.03
TNFAIP1-201ENST00000226225 MGAM2Q2M2H8 2515 aa8.59□□□□□ -1.03
TNFAIP1-201ENST00000226225 VWFP04275 2813 aa8.59□□□□□ -1.03
TNFAIP1-201ENST00000226225 TRAV25A0A0B4J276 109 aa8.59□□□□□ -1.04
TNFAIP1-201ENST00000226225 GAGE2BQ13066 116 aa8.59□□□□□ -1.04
TNFAIP1-201ENST00000226225 GAGE2EQ4V326 116 aa8.59□□□□□ -1.04
TNFAIP1-201ENST00000226225 TTC32Q5I0X7 151 aa8.59□□□□□ -1.04
TNFAIP1-201ENST00000226225 GAGE2DQ9UEU5 116 aa8.59□□□□□ -1.04
TNFAIP1-201ENST00000226225 TRAV12-1A0A0B4J245 112 aa8.58□□□□□ -1.04
TNFAIP1-201ENST00000226225 TEX49A0A1B0GTD5 131 aa8.58□□□□□ -1.04
TNFAIP1-201ENST00000226225 LINC00482Q8N8I6 264 aa8.58□□□□□ -1.04
TNFAIP1-201ENST00000226225 SPATA3Q8NHX4 192 aa8.58□□□□□ -1.04
TNFAIP1-201ENST00000226225 PRO1854Q9UHT4 67 aa8.58□□□□□ -1.04
TNFAIP1-201ENST00000226225 LINC01546A6NGU7 62 aa8.58□□□□□ -1.04
TNFAIP1-201ENST00000226225 UBE2D1P51668 147 aa8.58□□□□□ -1.04
TNFAIP1-201ENST00000226225 C9orf66Q5T8R8 295 aa8.58□□□□□ -1.04
TNFAIP1-201ENST00000226225 IGHV1OR15-1A0A075B7D0 117 aa8.58□□□□□ -1.04
TNFAIP1-201ENST00000226225 IGLV1-51P01701 117 aa8.58□□□□□ -1.04
TNFAIP1-201ENST00000226225 CRYGDP07320 174 aa8.58□□□□□ -1.04
TNFAIP1-201ENST00000226225 OXLD1Q5BKU9 147 aa8.58□□□□□ -1.04
TNFAIP1-201ENST00000226225 LYRM7Q5U5X0 104 aa8.58□□□□□ -1.04
TNFAIP1-201ENST00000226225 COX8CQ7Z4L0 72 aa8.58□□□□□ -1.04
TNFAIP1-201ENST00000226225 Q8N1Y9 231 aa8.58□□□□□ -1.04
TNFAIP1-201ENST00000226225 MDFICQ9P1T7 246 aa8.58□□□□□ -1.04
TNFAIP1-201ENST00000226225 CCDC179H3BU77 68 aa8.57□□□□□ -1.04
TNFAIP1-201ENST00000226225 C10orf126Q8N4M7 172 aa8.57□□□□□ -1.04
TNFAIP1-201ENST00000226225 SMIM20Q8N5G0 67 aa8.57□□□□□ -1.04
TNFAIP1-201ENST00000226225 INSP01308 110 aa8.56□□□□□ -1.04
TNFAIP1-201ENST00000226225 J3QQQ9 107 aa8.56□□□□□ -1.04
TNFAIP1-201ENST00000226225 TSHBP01222 138 aa8.56□□□□□ -1.04
TNFAIP1-201ENST00000226225 ZNF56Q15929 161 aa8.56□□□□□ -1.04
TNFAIP1-201ENST00000226225 ZNRF2Q8NHG8 242 aa8.56□□□□□ -1.04
TNFAIP1-201ENST00000226225 A0A0U1RRA0 63 aa8.56□□□□□ -1.04
TNFAIP1-201ENST00000226225 UBE2D3P61077 147 aa8.56□□□□□ -1.04
TNFAIP1-201ENST00000226225 UBE2D2P62837 147 aa8.56□□□□□ -1.04
TNFAIP1-201ENST00000226225 GAGE5Q13069 117 aa8.56□□□□□ -1.04
TNFAIP1-201ENST00000226225 GAGE6Q13070 117 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms