RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 KIR2DL4Q99706 377 aa9.68□□□□□ -0.86
SEC61B-201ENST00000223641 TRBV6-8A0A0A6YYG3 113 aa9.67□□□□□ -0.86
SEC61B-201ENST00000223641 C3orf84H3BNL1 204 aa9.67□□□□□ -0.86
SEC61B-201ENST00000223641 LINC00614P0C842 121 aa9.67□□□□□ -0.86
SEC61B-201ENST00000223641 ESDP10768 282 aa9.67□□□□□ -0.86
SEC61B-201ENST00000223641 ZFAND6Q6FIF0 208 aa9.67□□□□□ -0.86
SEC61B-201ENST00000223641 NIT1Q86X76 327 aa9.67□□□□□ -0.86
SEC61B-201ENST00000223641 LINC00310P59036 64 aa9.66□□□□□ -0.86
SEC61B-201ENST00000223641 RAB5BP61020 215 aa9.66□□□□□ -0.86
SEC61B-201ENST00000223641 COA6Q5JTJ3 125 aaKnown RBP9.66□□□□□ -0.86
SEC61B-201ENST00000223641 CASC10Q5T4H9 136 aa9.66□□□□□ -0.86
SEC61B-201ENST00000223641 TENM2Q9NT68 2774 aa9.65□□□□□ -0.86
SEC61B-201ENST00000223641 LELP1Q5T871 98 aa9.65□□□□□ -0.86
SEC61B-201ENST00000223641 DEFB104AQ8WTQ1 72 aa9.65□□□□□ -0.86
SEC61B-201ENST00000223641 CHCHD1Q96BP2 118 aaKnown RBP9.65□□□□□ -0.86
SEC61B-201ENST00000223641 CHCHD7Q9BUK0 85 aa9.65□□□□□ -0.86
SEC61B-201ENST00000223641 AP5S1Q9NUS5 200 aa9.65□□□□□ -0.86
SEC61B-201ENST00000223641 LAGE3Q14657 143 aa9.64□□□□□ -0.87
SEC61B-201ENST00000223641 ORMDL2Q53FV1 153 aa9.64□□□□□ -0.87
SEC61B-201ENST00000223641 FA2HQ7L5A8 372 aa9.64□□□□□ -0.87
SEC61B-201ENST00000223641 BAGE3Q86Y29 109 aa9.64□□□□□ -0.87
SEC61B-201ENST00000223641 LYSTQ99698 3801 aa9.64□□□□□ -0.87
SEC61B-201ENST00000223641 TRBV25-1A0A075B6N4 114 aa9.63□□□□□ -0.87
SEC61B-201ENST00000223641 IGHV1-24A0A0C4DH33 117 aa9.63□□□□□ -0.87
SEC61B-201ENST00000223641 FCER1GP30273 86 aa9.63□□□□□ -0.87
SEC61B-201ENST00000223641 AMTP48728 403 aa9.63□□□□□ -0.87
SEC61B-201ENST00000223641 CCL18P55774 89 aa9.63□□□□□ -0.87
SEC61B-201ENST00000223641 LINC00588Q9Y4M8 146 aa9.63□□□□□ -0.87
SEC61B-201ENST00000223641 A0A096LNJ9 63 aa9.62□□□□□ -0.87
SEC61B-201ENST00000223641 H7C423 109 aa9.62□□□□□ -0.87
SEC61B-201ENST00000223641 NUPR1O60356 82 aa9.62□□□□□ -0.87
SEC61B-201ENST00000223641 SERF1AO75920 110 aa9.62□□□□□ -0.87
SEC61B-201ENST00000223641 C20orf203Q8NBC4 194 aa9.62□□□□□ -0.87
SEC61B-201ENST00000223641 UPK3BQ9BT76 320 aa9.62□□□□□ -0.87
SEC61B-201ENST00000223641 MRPS16Q9Y3D3 137 aaKnown RBP9.62□□□□□ -0.87
SEC61B-201ENST00000223641 RNASEKQ6P5S7 137 aaKnown RBP9.61□□□□□ -0.87
SEC61B-201ENST00000223641 TMEM243Q9BU79 118 aa9.61□□□□□ -0.87
SEC61B-201ENST00000223641 VPS13DQ5THJ4 4388 aa9.61□□□□□ -0.87
SEC61B-201ENST00000223641 G0S2P27469 103 aa9.6□□□□□ -0.87
SEC61B-201ENST00000223641 NDUFA6P56556 154 aa9.6□□□□□ -0.87
SEC61B-201ENST00000223641 DNAH1Q9P2D7 4330 aa9.6□□□□□ -0.87
SEC61B-201ENST00000223641 TRAV8-6A0A0B4J262 113 aa9.59□□□□□ -0.87
SEC61B-201ENST00000223641 LINC01549A6NIU2 74 aa9.59□□□□□ -0.87
SEC61B-201ENST00000223641 HSBP1O75506 76 aa9.59□□□□□ -0.87
SEC61B-201ENST00000223641 C2orf66Q6UXQ4 117 aa9.59□□□□□ -0.87
SEC61B-201ENST00000223641 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.58□□□□□ -0.88
SEC61B-201ENST00000223641 IGKV2-29A2NJV5 120 aaPredicted RBP9.58□□□□□ -0.88
SEC61B-201ENST00000223641 RPL39P62891 51 aaKnown RBP9.58□□□□□ -0.88
SEC61B-201ENST00000223641 MRPL52Q86TS9 123 aaKnown RBP9.58□□□□□ -0.88
SEC61B-201ENST00000223641 WFDC10BQ8IUB3 73 aa9.58□□□□□ -0.88
SEC61B-201ENST00000223641 TMEM18Q96B42 140 aa9.58□□□□□ -0.88
SEC61B-201ENST00000223641 TOMM6Q96B49 74 aa9.58□□□□□ -0.88
SEC61B-201ENST00000223641 CHCHD5Q9BSY4 110 aa9.58□□□□□ -0.88
SEC61B-201ENST00000223641 TIMM21Q9BVV7 248 aa9.58□□□□□ -0.88
SEC61B-201ENST00000223641 CYSLTR1Q9Y271 337 aa9.58□□□□□ -0.88
SEC61B-201ENST00000223641 UBE2D4Q9Y2X8 147 aa9.58□□□□□ -0.88
SEC61B-201ENST00000223641 CSDC2Q9Y534 153 aaKnown RBP9.58□□□□□ -0.88
SEC61B-201ENST00000223641 A0A1B0GUV1 79 aa9.57□□□□□ -0.88
SEC61B-201ENST00000223641 HBDP02042 147 aa9.57□□□□□ -0.88
SEC61B-201ENST00000223641 BTF3P20290 206 aaKnown RBP9.57□□□□□ -0.88
SEC61B-201ENST00000223641 LGALS9CQ6DKI2 356 aa9.57□□□□□ -0.88
SEC61B-201ENST00000223641 PYGO1Q9Y3Y4 419 aa9.57□□□□□ -0.88
SEC61B-201ENST00000223641 IGIPA6NJ69 53 aa9.56□□□□□ -0.88
SEC61B-201ENST00000223641 DNAH10OSP0CZ25 163 aa9.56□□□□□ -0.88
SEC61B-201ENST00000223641 FGF6P10767 208 aa9.56□□□□□ -0.88
SEC61B-201ENST00000223641 PKIAP61925 76 aa9.56□□□□□ -0.88
SEC61B-201ENST00000223641 GAGE6Q13070 117 aa9.56□□□□□ -0.88
SEC61B-201ENST00000223641 PMCHL1Q16048 86 aa9.56□□□□□ -0.88
SEC61B-201ENST00000223641 PDZD11Q5EBL8 140 aa9.56□□□□□ -0.88
SEC61B-201ENST00000223641 FAM19A2Q8N3H0 131 aa9.56□□□□□ -0.88
SEC61B-201ENST00000223641 C5orf52A6NGY3 159 aa9.55□□□□□ -0.88
SEC61B-201ENST00000223641 UBE2L6O14933 153 aa9.55□□□□□ -0.88
SEC61B-201ENST00000223641 S100A6P06703 90 aa9.55□□□□□ -0.88
SEC61B-201ENST00000223641 NPSP0C0P6 89 aa9.55□□□□□ -0.88
SEC61B-201ENST00000223641 ZNF25P17030 456 aaPredicted RBP9.55□□□□□ -0.88
SEC61B-201ENST00000223641 MPV17L2Q567V2 206 aa9.55□□□□□ -0.88
SEC61B-201ENST00000223641 LINC01556Q5JQF7 62 aa9.55□□□□□ -0.88
SEC61B-201ENST00000223641 FAM104AQ969W3 186 aa9.55□□□□□ -0.88
SEC61B-201ENST00000223641 SPANXA1Q9NS26 97 aa9.55□□□□□ -0.88
SEC61B-201ENST00000223641 SIVA1O15304 175 aa9.54□□□□□ -0.88
SEC61B-201ENST00000223641 RBX1P62877 108 aa9.54□□□□□ -0.88
SEC61B-201ENST00000223641 SMAGPQ0VAQ4 97 aa9.54□□□□□ -0.88
SEC61B-201ENST00000223641 ERASQ7Z444 233 aa9.54□□□□□ -0.88
SEC61B-201ENST00000223641 PACRGQ96M98 296 aaPredicted RBP9.54□□□□□ -0.88
SEC61B-201ENST00000223641 TIMM17AQ99595 171 aa9.54□□□□□ -0.88
SEC61B-201ENST00000223641 Q9H8V8 135 aa9.54□□□□□ -0.88
SEC61B-201ENST00000223641 IGLV4-60A0A075B6I1 120 aa9.53□□□□□ -0.88
SEC61B-201ENST00000223641 TMEM262E9PQX1 116 aa9.53□□□□□ -0.88
SEC61B-201ENST00000223641 SNRPEP62304 92 aaKnown RBP9.53□□□□□ -0.88
SEC61B-201ENST00000223641 MRPS36P82909 103 aaKnown RBP9.53□□□□□ -0.88
SEC61B-201ENST00000223641 UBE2DNLQ8IWF7 75 aa9.53□□□□□ -0.88
SEC61B-201ENST00000223641 HIST3H2BBQ8N257 126 aa9.53□□□□□ -0.88
SEC61B-201ENST00000223641 Q8N3U1 123 aa9.53□□□□□ -0.88
SEC61B-201ENST00000223641 Q8N976 141 aa9.53□□□□□ -0.88
SEC61B-201ENST00000223641 CDC42SE2Q9NRR3 84 aa9.53□□□□□ -0.88
SEC61B-201ENST00000223641 A0A087WX48 190 aa9.52□□□□□ -0.89
SEC61B-201ENST00000223641 AMMECR1LQ6DCA0 310 aa9.52□□□□□ -0.89
SEC61B-201ENST00000223641 SCGB3A1Q96QR1 104 aa9.52□□□□□ -0.89
SEC61B-201ENST00000223641 ALMS1Q8TCU4 4167 aa9.52□□□□□ -0.89
SEC61B-201ENST00000223641 IGLV4-3A0A075B6K6 122 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 221.1 ms