RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 NDUFA4O00483 81 aa8.54□□□□□ -1.04
USP31-201ENST00000219689 CD59P13987 128 aa8.54□□□□□ -1.04
USP31-201ENST00000219689 H7C423 109 aa8.54□□□□□ -1.04
USP31-201ENST00000219689 K7ERS5 55 aa8.54□□□□□ -1.04
USP31-201ENST00000219689 LHBP01229 141 aa8.54□□□□□ -1.04
USP31-201ENST00000219689 IGLV2-8P01709 118 aa8.54□□□□□ -1.04
USP31-201ENST00000219689 UBE2AP49459 152 aa8.54□□□□□ -1.04
USP31-201ENST00000219689 MRPL36Q9P0J6 103 aaKnown RBP8.54□□□□□ -1.04
USP31-201ENST00000219689 GATA4P43694 442 aa8.53□□□□□ -1.04
USP31-201ENST00000219689 C9orf47Q6ZRZ4 202 aa8.53□□□□□ -1.04
USP31-201ENST00000219689 SPRY4Q9C004 299 aa8.53□□□□□ -1.04
USP31-201ENST00000219689 IGHV3-33P01772 117 aa8.53□□□□□ -1.04
USP31-201ENST00000219689 Q0VFX4 171 aa8.53□□□□□ -1.04
USP31-201ENST00000219689 RMI2Q96E14 147 aa8.53□□□□□ -1.04
USP31-201ENST00000219689 A0A0J9YWU9 116 aa8.53□□□□□ -1.04
USP31-201ENST00000219689 IGHV7-4-1A0A0J9YVY3 117 aa8.53□□□□□ -1.04
USP31-201ENST00000219689 C4orf26Q17RF5 130 aa8.53□□□□□ -1.04
USP31-201ENST00000219689 COL27A1Q8IZC6 1860 aaPredicted RBP8.53□□□□□ -1.04
USP31-201ENST00000219689 TRBV27A0A0K0K1C4 114 aa8.52□□□□□ -1.04
USP31-201ENST00000219689 IGLV2-14P01704 120 aa8.52□□□□□ -1.04
USP31-201ENST00000219689 GATA3P23771 443 aa8.52□□□□□ -1.05
USP31-201ENST00000219689 Q6Q795 121 aa8.52□□□□□ -1.05
USP31-201ENST00000219689 TRBV30A0A0K0K1B3 111 aa8.52□□□□□ -1.05
USP31-201ENST00000219689 IGHV1-69P01742 117 aa8.52□□□□□ -1.05
USP31-201ENST00000219689 IGLV3-9A0A075B6K5 115 aa8.52□□□□□ -1.05
USP31-201ENST00000219689 LYRM9A8MSI8 78 aa8.52□□□□□ -1.05
USP31-201ENST00000219689 ZNF503-AS2A6NEH8 195 aa8.52□□□□□ -1.05
USP31-201ENST00000219689 IGHV3-30P01768 117 aa8.52□□□□□ -1.05
USP31-201ENST00000219689 IGHV3-30-5P0DP03 117 aa8.52□□□□□ -1.05
USP31-201ENST00000219689 TIMM17AQ99595 171 aa8.52□□□□□ -1.05
USP31-201ENST00000219689 PRAC2D3DTV9 90 aa8.51□□□□□ -1.05
USP31-201ENST00000219689 CHD6Q8TD26 2715 aa8.51□□□□□ -1.05
USP31-201ENST00000219689 EPOPA6NHQ4 379 aa8.51□□□□□ -1.05
USP31-201ENST00000219689 TMEM263Q8WUH6 116 aaKnown RBP8.51□□□□□ -1.05
USP31-201ENST00000219689 PSPHP1O15172 72 aa8.51□□□□□ -1.05
USP31-201ENST00000219689 TIRAPP58753 221 aa8.51□□□□□ -1.05
USP31-201ENST00000219689 LENEPQ9Y5L5 61 aa8.51□□□□□ -1.05
USP31-201ENST00000219689 ITPR3Q14573 2671 aa8.51□□□□□ -1.05
USP31-201ENST00000219689 DKK4Q9UBT3 224 aa8.5□□□□□ -1.05
USP31-201ENST00000219689 K7EQD1 137 aa8.5□□□□□ -1.05
USP31-201ENST00000219689 FAM19A3Q7Z5A8 133 aa8.5□□□□□ -1.05
USP31-201ENST00000219689 IGKV2D-24A0A075B6R9 120 aa8.5□□□□□ -1.05
USP31-201ENST00000219689 TRBV7-3A0A075B6L6 115 aa8.5□□□□□ -1.05
USP31-201ENST00000219689 B4DSR2 109 aa8.5□□□□□ -1.05
USP31-201ENST00000219689 IGHV4-59P01825 116 aa8.5□□□□□ -1.05
USP31-201ENST00000219689 CFAP46Q8IYW2 2715 aa8.5□□□□□ -1.05
USP31-201ENST00000219689 A0A0J9YY99 117 aa8.5□□□□□ -1.05
USP31-201ENST00000219689 FAM30AQ9NZY2 134 aa8.5□□□□□ -1.05
USP31-201ENST00000219689 Q8N976 141 aa8.5□□□□□ -1.05
USP31-201ENST00000219689 CEMP1Q6PRD7 247 aaPredicted RBP8.5□□□□□ -1.05
USP31-201ENST00000219689 CAMK2N2Q96S95 79 aa8.49□□□□□ -1.05
USP31-201ENST00000219689 GCN1Q92616 2671 aaKnown RBP8.49□□□□□ -1.05
USP31-201ENST00000219689 IGKV1OR2-108A0A075B7D4 117 aa8.49□□□□□ -1.05
USP31-201ENST00000219689 NEXN-AS1Q8NBZ9 246 aa8.49□□□□□ -1.05
USP31-201ENST00000219689 MRPS36P82909 103 aaKnown RBP8.49□□□□□ -1.05
USP31-201ENST00000219689 DIRC1Q969H9 104 aa8.49□□□□□ -1.05
USP31-201ENST00000219689 WFDC10BQ8IUB3 73 aa8.49□□□□□ -1.05
USP31-201ENST00000219689 VPREB1P12018 145 aa8.49□□□□□ -1.05
USP31-201ENST00000219689 MDFICQ9P1T7 246 aa8.49□□□□□ -1.05
USP31-201ENST00000219689 LINC01619G3V211 115 aa8.48□□□□□ -1.05
USP31-201ENST00000219689 LINC00526Q96FQ7 95 aa8.48□□□□□ -1.05
USP31-201ENST00000219689 GYPEP15421 78 aa8.48□□□□□ -1.05
USP31-201ENST00000219689 A0A0G2JNJ9 132 aa8.48□□□□□ -1.05
USP31-201ENST00000219689 FGF23Q9GZV9 251 aaPredicted RBP8.48□□□□□ -1.05
USP31-201ENST00000219689 Q9UFV3 132 aa8.48□□□□□ -1.05
USP31-201ENST00000219689 IGLV3-19P01714 112 aa8.48□□□□□ -1.05
USP31-201ENST00000219689 MIFP14174 115 aa8.48□□□□□ -1.05
USP31-201ENST00000219689 APOC4P55056 127 aa8.48□□□□□ -1.05
USP31-201ENST00000219689 MBD6Q96DN6 1003 aa8.47□□□□□ -1.05
USP31-201ENST00000219689 STAB2Q8WWQ8 2551 aa8.47□□□□□ -1.05
USP31-201ENST00000219689 I3L2K1 104 aa8.47□□□□□ -1.05
USP31-201ENST00000219689 VWCEQ96DN2 955 aa8.47□□□□□ -1.05
USP31-201ENST00000219689 U3KQK5 164 aa8.47□□□□□ -1.05
USP31-201ENST00000219689 COL4A3Q01955 1670 aa8.47□□□□□ -1.05
USP31-201ENST00000219689 DMBT1Q9UGM3 2413 aaPredicted RBP8.47□□□□□ -1.05
USP31-201ENST00000219689 TMEM223A0PJW6 202 aa8.47□□□□□ -1.05
USP31-201ENST00000219689 ZNF883P0CG24 379 aa8.47□□□□□ -1.05
USP31-201ENST00000219689 C22orf34Q6ZV56 151 aa8.47□□□□□ -1.05
USP31-201ENST00000219689 Q8TCH9 128 aa8.47□□□□□ -1.05
USP31-201ENST00000219689 E7EQL1 145 aa8.47□□□□□ -1.05
USP31-201ENST00000219689 ZFAND3Q9H8U3 227 aa8.47□□□□□ -1.05
USP31-201ENST00000219689 Q6ZS92 163 aa8.47□□□□□ -1.05
USP31-201ENST00000219689 LINC00311Q8N616 119 aa8.47□□□□□ -1.05
USP31-201ENST00000219689 NPBQ8NG41 125 aa8.47□□□□□ -1.05
USP31-201ENST00000219689 PRO0628Q9UI54 55 aa8.47□□□□□ -1.05
USP31-201ENST00000219689 K7EIM0 57 aa8.46□□□□□ -1.05
USP31-201ENST00000219689 AJUBAQ96IF1 538 aa8.46□□□□□ -1.05
USP31-201ENST00000219689 CASC2Q6XLA1 102 aa8.46□□□□□ -1.05
USP31-201ENST00000219689 COL6A5A8TX70 2615 aa8.46□□□□□ -1.05
USP31-201ENST00000219689 A8MZ25 164 aa8.46□□□□□ -1.06
USP31-201ENST00000219689 DSCR9P59020 149 aa8.46□□□□□ -1.06
USP31-201ENST00000219689 NANOS2P60321 138 aaKnown RBP8.46□□□□□ -1.06
USP31-201ENST00000219689 MBD3L4A6NDZ8 208 aaPredicted RBP8.46□□□□□ -1.06
USP31-201ENST00000219689 MBD3L3A6NE82 208 aaPredicted RBP8.46□□□□□ -1.06
USP31-201ENST00000219689 MBD3L5A6NJ08 208 aaPredicted RBP8.46□□□□□ -1.06
USP31-201ENST00000219689 J3QLI3 93 aa8.46□□□□□ -1.06
USP31-201ENST00000219689 COX7BP24311 80 aa8.46□□□□□ -1.06
USP31-201ENST00000219689 DEFB1P60022 68 aa8.46□□□□□ -1.06
USP31-201ENST00000219689 IGKV1-17P01599 117 aa8.45□□□□□ -1.06
USP31-201ENST00000219689 ODF3L1Q8IXM7 274 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms