RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 H0Y9J4 135 aa14.23□□□□□ -0.13
SMPD3-201ENST00000219334 PLA2G2AP14555 144 aa14.23□□□□□ -0.13
SMPD3-201ENST00000219334 PLXNB3Q9ULL4 1909 aa14.23□□□□□ -0.13
SMPD3-201ENST00000219334 TTTY13Q9BZ97 58 aa14.23□□□□□ -0.13
SMPD3-201ENST00000219334 NUPR1O60356 82 aa14.22□□□□□ -0.13
SMPD3-201ENST00000219334 NPSP0C0P6 89 aa14.22□□□□□ -0.13
SMPD3-201ENST00000219334 HIGD1BQ9P298 99 aa14.22□□□□□ -0.13
SMPD3-201ENST00000219334 LY6LH3BQJ8 138 aa14.22□□□□□ -0.13
SMPD3-201ENST00000219334 TMEM258P61165 79 aa14.22□□□□□ -0.13
SMPD3-201ENST00000219334 A0A0B4J2C4 111 aa14.22□□□□□ -0.13
SMPD3-201ENST00000219334 C10orf99Q6UWK7 81 aa14.22□□□□□ -0.13
SMPD3-201ENST00000219334 H7C423 109 aa14.21□□□□□ -0.13
SMPD3-201ENST00000219334 TMEM256-PLSCR3K7ERE1 68 aa14.21□□□□□ -0.13
SMPD3-201ENST00000219334 ODF1Q14990 250 aa14.21□□□□□ -0.14
SMPD3-201ENST00000219334 LTBP2Q14767 1821 aa14.2□□□□□ -0.14
SMPD3-201ENST00000219334 ZNF702PQ9H963 129 aa14.2□□□□□ -0.14
SMPD3-201ENST00000219334 CRYGBP07316 175 aa14.2□□□□□ -0.14
SMPD3-201ENST00000219334 IGKV3D-7A0A0C4DH55 119 aa14.19□□□□□ -0.14
SMPD3-201ENST00000219334 BRWD1-AS2P59051 145 aa14.19□□□□□ -0.14
SMPD3-201ENST00000219334 FAM19A1Q7Z5A9 133 aa14.19□□□□□ -0.14
SMPD3-201ENST00000219334 C20orf173Q96LM9 149 aa14.19□□□□□ -0.14
SMPD3-201ENST00000219334 FXYD2P54710 66 aa14.18□□□□□ -0.14
SMPD3-201ENST00000219334 PDE6GP18545 87 aa14.18□□□□□ -0.14
SMPD3-201ENST00000219334 NFE4Q86UQ8 179 aa14.18□□□□□ -0.14
SMPD3-201ENST00000219334 C7orf33Q8WU49 177 aa14.18□□□□□ -0.14
SMPD3-201ENST00000219334 C14orf132Q9NPU4 83 aa14.18□□□□□ -0.14
SMPD3-201ENST00000219334 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.18□□□□□ -0.14
SMPD3-201ENST00000219334 KIR2DL5BA0A0G2JN68 375 aa14.18□□□□□ -0.14
SMPD3-201ENST00000219334 KIR2DL5BA0A0G2JPC4 375 aa14.18□□□□□ -0.14
SMPD3-201ENST00000219334 KIR2DL5AQ8N109 375 aa14.18□□□□□ -0.14
SMPD3-201ENST00000219334 PSMB8P28062 276 aa14.17□□□□□ -0.14
SMPD3-201ENST00000219334 TRBV6-4A0A1B0GX49 114 aa14.17□□□□□ -0.14
SMPD3-201ENST00000219334 C1orf229Q6ZS94 237 aaPredicted RBP14.17□□□□□ -0.14
SMPD3-201ENST00000219334 WFDC9Q8NEX5 89 aa14.17□□□□□ -0.14
SMPD3-201ENST00000219334 ZFAND3Q9H8U3 227 aa14.17□□□□□ -0.14
SMPD3-201ENST00000219334 LINC00467Q9BRT7 94 aa14.17□□□□□ -0.14
SMPD3-201ENST00000219334 C11orf1Q9H5F2 150 aa14.17□□□□□ -0.14
SMPD3-201ENST00000219334 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.16□□□□□ -0.14
SMPD3-201ENST00000219334 CLEC2BQ92478 149 aa14.16□□□□□ -0.14
SMPD3-201ENST00000219334 SPANXCQ9NY87 97 aa14.16□□□□□ -0.14
SMPD3-201ENST00000219334 NCOA6Q14686 2063 aaPredicted RBP14.16□□□□□ -0.14
SMPD3-201ENST00000219334 TRBV6-8A0A0A6YYG3 113 aa14.15□□□□□ -0.14
SMPD3-201ENST00000219334 IGLC6P0CF74 106 aa14.15□□□□□ -0.14
SMPD3-201ENST00000219334 NEXN-AS1Q8NBZ9 246 aa14.15□□□□□ -0.14
SMPD3-201ENST00000219334 A0A096LNI7 61 aa14.15□□□□□ -0.14
SMPD3-201ENST00000219334 MIAQ16674 131 aa14.14□□□□□ -0.15
SMPD3-201ENST00000219334 C5orf47Q569G3 176 aa14.14□□□□□ -0.15
SMPD3-201ENST00000219334 IGF2RP11717 2491 aa14.14□□□□□ -0.15
SMPD3-201ENST00000219334 CFAP126Q5VTH2 177 aa14.14□□□□□ -0.15
SMPD3-201ENST00000219334 IGLV2-18A0A075B6J9 118 aa14.14□□□□□ -0.15
SMPD3-201ENST00000219334 TEN1Q86WV5 123 aa14.13□□□□□ -0.15
SMPD3-201ENST00000219334 TNRC6AQ8NDV7 1962 aaKnown RBP14.13□□□□□ -0.15
SMPD3-201ENST00000219334 COL4A3Q01955 1670 aa14.13□□□□□ -0.15
SMPD3-201ENST00000219334 SYCNQ0VAF6 134 aa14.13□□□□□ -0.15
SMPD3-201ENST00000219334 TRBV10-2A0A0K0K1G8 114 aa14.12□□□□□ -0.15
SMPD3-201ENST00000219334 FRMD6-AS1P0C7T7 363 aa14.12□□□□□ -0.15
SMPD3-201ENST00000219334 HIST2H2BDQ6DRA6 164 aa14.12□□□□□ -0.15
SMPD3-201ENST00000219334 H3BT86 120 aa14.12□□□□□ -0.15
SMPD3-201ENST00000219334 LINC00322Q6ZN03 302 aaPredicted RBP14.12□□□□□ -0.15
SMPD3-201ENST00000219334 BBC3Q96PG8 261 aaPredicted RBP14.12□□□□□ -0.15
SMPD3-201ENST00000219334 DENND4AQ7Z401 1863 aa14.12□□□□□ -0.15
SMPD3-201ENST00000219334 CDKN2A-AS1Q9UH64 79 aa14.11□□□□□ -0.15
SMPD3-201ENST00000219334 LY6G6CO95867 125 aa14.1□□□□□ -0.15
SMPD3-201ENST00000219334 FAM19A5Q7Z5A7 132 aaPredicted RBP14.1□□□□□ -0.15
SMPD3-201ENST00000219334 IGKV2D-26A0A0A0MRZ7 120 aa14.1□□□□□ -0.15
SMPD3-201ENST00000219334 A0A1B0GXF2 115 aa14.1□□□□□ -0.15
SMPD3-201ENST00000219334 M0R2N4 97 aa14.1□□□□□ -0.15
SMPD3-201ENST00000219334 Q6ZPA2 131 aa14.1□□□□□ -0.15
SMPD3-201ENST00000219334 PRB2P02812 416 aaPredicted RBP14.1□□□□□ -0.15
SMPD3-201ENST00000219334 KPRPQ5T749 579 aaPredicted RBP14.1□□□□□ -0.15
SMPD3-201ENST00000219334 GDF5OSQ5U4N7 250 aa14.1□□□□□ -0.15
SMPD3-201ENST00000219334 A0A0J9YXY3 114 aa14.09□□□□□ -0.15
SMPD3-201ENST00000219334 TDRG1Q3Y452 100 aa14.09□□□□□ -0.15
SMPD3-201ENST00000219334 ATOX1O00244 68 aa14.08□□□□□ -0.16
SMPD3-201ENST00000219334 IGLV2-8P01709 118 aa14.08□□□□□ -0.16
SMPD3-201ENST00000219334 MLST8Q9BVC4 326 aa14.08□□□□□ -0.16
SMPD3-201ENST00000219334 EIF4EBP1Q13541 118 aaPredicted RBP14.08□□□□□ -0.16
SMPD3-201ENST00000219334 MED12LQ86YW9 2145 aa14.08□□□□□ -0.16
SMPD3-201ENST00000219334 Q8N976 141 aa14.08□□□□□ -0.16
SMPD3-201ENST00000219334 Q8N6K4 173 aa14.07□□□□□ -0.16
SMPD3-201ENST00000219334 CDPF1Q6NVV7 123 aa14.07□□□□□ -0.16
SMPD3-201ENST00000219334 XAGE1AQ9HD64 81 aa14.07□□□□□ -0.16
SMPD3-201ENST00000219334 IBA57-AS1B1ANH7 110 aa14.07□□□□□ -0.16
SMPD3-201ENST00000219334 IGKV4-1P06312 121 aa14.07□□□□□ -0.16
SMPD3-201ENST00000219334 M0QY20 66 aa14.07□□□□□ -0.16
SMPD3-201ENST00000219334 PRRC2AP48634 2157 aaKnown RBP14.07□□□□□ -0.16
SMPD3-201ENST00000219334 IGLV4-3A0A075B6K6 122 aa14.05□□□□□ -0.16
SMPD3-201ENST00000219334 BPY2O14599 106 aa14.05□□□□□ -0.16
SMPD3-201ENST00000219334 WFDC10AQ9H1F0 79 aa14.05□□□□□ -0.16
SMPD3-201ENST00000219334 SEC61GP60059 68 aa14.05□□□□□ -0.16
SMPD3-201ENST00000219334 C18orf65Q6ZTR6 163 aa14.05□□□□□ -0.16
SMPD3-201ENST00000219334 OXLD1Q5BKU9 147 aa14.05□□□□□ -0.16
SMPD3-201ENST00000219334 RBX1P62877 108 aa14.04□□□□□ -0.16
SMPD3-201ENST00000219334 SMIM20Q8N5G0 67 aa14.04□□□□□ -0.16
SMPD3-201ENST00000219334 PCDH15Q96QU1 1955 aa14.04□□□□□ -0.16
SMPD3-201ENST00000219334 DSCAML1Q8TD84 2053 aa14.04□□□□□ -0.16
SMPD3-201ENST00000219334 CRIP3Q6Q6R5 217 aa14.04□□□□□ -0.16
SMPD3-201ENST00000219334 SPATA12Q7Z6I5 190 aa14.04□□□□□ -0.16
SMPD3-201ENST00000219334 NDUFA7O95182 113 aa14.03□□□□□ -0.16
SMPD3-201ENST00000219334 IGLV1-40P01703 118 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms