RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 CACNG7P62955 275 aa10.04□□□□□ -0.8
UPK3A-201ENST00000216211 HAMPP81172 84 aa10.04□□□□□ -0.8
UPK3A-201ENST00000216211 LELP1Q5T871 98 aa10.04□□□□□ -0.8
UPK3A-201ENST00000216211 ALKBH7Q9BT30 221 aaPredicted RBP10.04□□□□□ -0.8
UPK3A-201ENST00000216211 IGLV5-52A0A0A0MRZ9 124 aa10.03□□□□□ -0.8
UPK3A-201ENST00000216211 ESDP10768 282 aa10.03□□□□□ -0.8
UPK3A-201ENST00000216211 NTF3P20783 257 aa10.03□□□□□ -0.8
UPK3A-201ENST00000216211 ATP6V0E2Q8NHE4 81 aa10.03□□□□□ -0.8
UPK3A-201ENST00000216211 PTH2Q96A98 100 aa10.03□□□□□ -0.8
UPK3A-201ENST00000216211 GTSF1LQ9H1H1 148 aa10.03□□□□□ -0.8
UPK3A-201ENST00000216211 ASIPP42127 132 aa10.02□□□□□ -0.81
UPK3A-201ENST00000216211 AKR1D1P51857 326 aa10.02□□□□□ -0.81
UPK3A-201ENST00000216211 TWIST1Q15672 202 aa10.02□□□□□ -0.81
UPK3A-201ENST00000216211 DMRTA1Q5VZB9 504 aa10.02□□□□□ -0.81
UPK3A-201ENST00000216211 FAM104BQ5XKR9 115 aa10.02□□□□□ -0.81
UPK3A-201ENST00000216211 Q6ZSN1 163 aa10.02□□□□□ -0.81
UPK3A-201ENST00000216211 TMEM191AQ9H0A3 160 aa10.02□□□□□ -0.81
UPK3A-201ENST00000216211 S100A4P26447 101 aaKnown RBP10.01□□□□□ -0.81
UPK3A-201ENST00000216211 S100A2P29034 98 aa10.01□□□□□ -0.81
UPK3A-201ENST00000216211 BAGE3Q86Y29 109 aa10.01□□□□□ -0.81
UPK3A-201ENST00000216211 Q8N814 137 aa10.01□□□□□ -0.81
UPK3A-201ENST00000216211 C18orf32Q8TCD1 76 aa10.01□□□□□ -0.81
UPK3A-201ENST00000216211 MYCBP2O75592 4640 aa10.01□□□□□ -0.81
UPK3A-201ENST00000216211 MUC21A0A0G2JKD1 596 aa10□□□□□ -0.81
UPK3A-201ENST00000216211 MUC21A0A140T8X8 626 aa10□□□□□ -0.81
UPK3A-201ENST00000216211 GAGE12JA6NER3 117 aa10□□□□□ -0.81
UPK3A-201ENST00000216211 H3BVH4 76 aa10□□□□□ -0.81
UPK3A-201ENST00000216211 LINC00310P59036 64 aa10□□□□□ -0.81
UPK3A-201ENST00000216211 GAGE1Q13065 139 aa10□□□□□ -0.81
UPK3A-201ENST00000216211 GAGE4Q13068 117 aa10□□□□□ -0.81
UPK3A-201ENST00000216211 GAGE5Q13069 117 aa10□□□□□ -0.81
UPK3A-201ENST00000216211 GAGE13Q4V321 117 aa10□□□□□ -0.81
UPK3A-201ENST00000216211 Q8N3U1 123 aa10□□□□□ -0.81
UPK3A-201ENST00000216211 NTN5Q8WTR8 489 aaPredicted RBP10□□□□□ -0.81
UPK3A-201ENST00000216211 JPT2Q9H910 190 aa10□□□□□ -0.81
UPK3A-201ENST00000216211 SRRM2Q9UQ35 2752 aaKnown RBP10□□□□□ -0.81
UPK3A-201ENST00000216211 NUPR1O60356 82 aa9.99□□□□□ -0.81
UPK3A-201ENST00000216211 SERF1AO75920 110 aa9.99□□□□□ -0.81
UPK3A-201ENST00000216211 PDZD11Q5EBL8 140 aa9.99□□□□□ -0.81
UPK3A-201ENST00000216211 ZFP2Q6ZN57 461 aa9.99□□□□□ -0.81
UPK3A-201ENST00000216211 OR10AG1Q8NH19 301 aa9.99□□□□□ -0.81
UPK3A-201ENST00000216211 TMEM18Q96B42 140 aa9.99□□□□□ -0.81
UPK3A-201ENST00000216211 HIST1H2BLQ99880 126 aa9.99□□□□□ -0.81
UPK3A-201ENST00000216211 A8MWV9 139 aa9.98□□□□□ -0.81
UPK3A-201ENST00000216211 LINC00694P0DN24 101 aa9.98□□□□□ -0.81
UPK3A-201ENST00000216211 FABP4P15090 132 aa9.98□□□□□ -0.81
UPK3A-201ENST00000216211 MRPL51Q4U2R6 128 aaKnown RBP9.98□□□□□ -0.81
UPK3A-201ENST00000216211 AMN1Q8IY45 258 aa9.98□□□□□ -0.81
UPK3A-201ENST00000216211 PACRGQ96M98 296 aaPredicted RBP9.98□□□□□ -0.81
UPK3A-201ENST00000216211 TMEM70Q9BUB7 260 aa9.98□□□□□ -0.81
UPK3A-201ENST00000216211 Q9UF83 564 aa9.98□□□□□ -0.81
UPK3A-201ENST00000216211 SSTP61278 116 aa9.97□□□□□ -0.81
UPK3A-201ENST00000216211 WFDC2Q14508 124 aa9.97□□□□□ -0.81
UPK3A-201ENST00000216211 LAGE3Q14657 143 aa9.97□□□□□ -0.81
UPK3A-201ENST00000216211 PIK3CD-AS1Q5SR53 167 aa9.97□□□□□ -0.81
UPK3A-201ENST00000216211 SPANXN1Q5VSR9 72 aa9.97□□□□□ -0.81
UPK3A-201ENST00000216211 UFSP1Q6NVU6 142 aa9.97□□□□□ -0.81
UPK3A-201ENST00000216211 SMIM15Q7Z3B0 74 aa9.97□□□□□ -0.81
UPK3A-201ENST00000216211 C14orf178Q8N769 122 aaPredicted RBP9.97□□□□□ -0.81
UPK3A-201ENST00000216211 RNF185Q96GF1 192 aa9.97□□□□□ -0.81
UPK3A-201ENST00000216211 SAMD10Q9BYL1 202 aa9.97□□□□□ -0.81
UPK3A-201ENST00000216211 DMBT1Q9UGM3 2413 aaPredicted RBP9.96□□□□□ -0.81
UPK3A-201ENST00000216211 PPBPP02775 128 aa9.96□□□□□ -0.82
UPK3A-201ENST00000216211 RAB4AP20338 218 aa9.96□□□□□ -0.82
UPK3A-201ENST00000216211 IQCJQ1A5X6 159 aa9.96□□□□□ -0.82
UPK3A-201ENST00000216211 LINC00518Q8N0U6 118 aa9.96□□□□□ -0.82
UPK3A-201ENST00000216211 OR10D4PQ8NGN7 298 aa9.96□□□□□ -0.82
UPK3A-201ENST00000216211 TM2D2Q9BX73 214 aa9.96□□□□□ -0.82
UPK3A-201ENST00000216211 FAM30AQ9NZY2 134 aa9.96□□□□□ -0.82
UPK3A-201ENST00000216211 PHLDA3Q9Y5J5 127 aa9.96□□□□□ -0.82
UPK3A-201ENST00000216211 FAM229AH3BQW9 127 aa9.95□□□□□ -0.82
UPK3A-201ENST00000216211 DAZ4Q86SG3 579 aaKnown RBP9.95□□□□□ -0.82
UPK3A-201ENST00000216211 ORMDL3Q8N138 153 aa9.95□□□□□ -0.82
UPK3A-201ENST00000216211 DAZ3Q9NR90 486 aaKnown RBP9.95□□□□□ -0.82
UPK3A-201ENST00000216211 D6R8Y8 96 aa9.94□□□□□ -0.82
UPK3A-201ENST00000216211 LECT2O14960 151 aa9.94□□□□□ -0.82
UPK3A-201ENST00000216211 SMIM6P0DI80 62 aa9.94□□□□□ -0.82
UPK3A-201ENST00000216211 NIT1Q86X76 327 aa9.94□□□□□ -0.82
UPK3A-201ENST00000216211 SYT8Q8NBV8 401 aa9.94□□□□□ -0.82
UPK3A-201ENST00000216211 CHCHD1Q96BP2 118 aaKnown RBP9.94□□□□□ -0.82
UPK3A-201ENST00000216211 URB1-AS1Q96HZ7 61 aa9.94□□□□□ -0.82
UPK3A-201ENST00000216211 PRELID3AQ96N28 172 aa9.94□□□□□ -0.82
UPK3A-201ENST00000216211 FLG2Q5D862 2391 aaPredicted RBP9.93□□□□□ -0.82
UPK3A-201ENST00000216211 TRAV8-3A0A0A6YYJ7 113 aa9.93□□□□□ -0.82
UPK3A-201ENST00000216211 CKS2P33552 79 aa9.93□□□□□ -0.82
UPK3A-201ENST00000216211 FAM74A4Q5TZK3 123 aa9.93□□□□□ -0.82
UPK3A-201ENST00000216211 LAMTOR2Q9Y2Q5 125 aa9.93□□□□□ -0.82
UPK3A-201ENST00000216211 A0A087WWL8 130 aa9.92□□□□□ -0.82
UPK3A-201ENST00000216211 M0R381 172 aa9.92□□□□□ -0.82
UPK3A-201ENST00000216211 RHODO00212 210 aa9.92□□□□□ -0.82
UPK3A-201ENST00000216211 DPH3P1Q9H4G8 78 aa9.92□□□□□ -0.82
UPK3A-201ENST00000216211 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.91□□□□□ -0.82
UPK3A-201ENST00000216211 LINC00614P0C842 121 aa9.91□□□□□ -0.82
UPK3A-201ENST00000216211 MRAP2Q96G30 205 aa9.91□□□□□ -0.82
UPK3A-201ENST00000216211 HSBP1O75506 76 aa9.9□□□□□ -0.82
UPK3A-201ENST00000216211 PMCHP20382 165 aa9.9□□□□□ -0.82
UPK3A-201ENST00000216211 AMTP48728 403 aa9.9□□□□□ -0.82
UPK3A-201ENST00000216211 RNASEKQ6P5S7 137 aaKnown RBP9.9□□□□□ -0.82
UPK3A-201ENST00000216211 BAALCQ8WXS3 180 aa9.9□□□□□ -0.82
UPK3A-201ENST00000216211 DNAJC30Q96LL9 226 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms