RNA–Protein interactions for RNA: ENST00000641899.1

SRRM4-204, Transcript of serine/arginine repetitive matrix 4, humanhuman

Gene SRRM4, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-204ENST00000641899 CLRN3Q8NCR9 226 aa9.68□□□□□ -0.86
SRRM4-204ENST00000641899 ACTR3CQ9C0K3 210 aaPredicted RBP9.68□□□□□ -0.86
SRRM4-204ENST00000641899 MAP1LC3BQ9GZQ8 125 aa9.68□□□□□ -0.86
SRRM4-204ENST00000641899 CTXND1A0A1B0GTU2 59 aa9.67□□□□□ -0.86
SRRM4-204ENST00000641899 FAM74A7A6NL05 159 aa9.67□□□□□ -0.86
SRRM4-204ENST00000641899 FABP5P3A8MUU1 101 aa9.67□□□□□ -0.86
SRRM4-204ENST00000641899 ZNF726P1Q15940 193 aa9.67□□□□□ -0.86
SRRM4-204ENST00000641899 FAM74A3Q4VXF1 159 aa9.67□□□□□ -0.86
SRRM4-204ENST00000641899 UFSP1Q6NVU6 142 aa9.67□□□□□ -0.86
SRRM4-204ENST00000641899 C7orf33Q8WU49 177 aa9.67□□□□□ -0.86
SRRM4-204ENST00000641899 RNF185Q96GF1 192 aa9.67□□□□□ -0.86
SRRM4-204ENST00000641899 GNG13Q9P2W3 67 aa9.67□□□□□ -0.86
SRRM4-204ENST00000641899 TRBV7-3A0A075B6L6 115 aa9.66□□□□□ -0.86
SRRM4-204ENST00000641899 SRP19P09132 144 aaKnown RBP9.66□□□□□ -0.86
SRRM4-204ENST00000641899 ENHOQ6UWT2 76 aa9.66□□□□□ -0.86
SRRM4-204ENST00000641899 PHLDA3Q9Y5J5 127 aa9.66□□□□□ -0.86
SRRM4-204ENST00000641899 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.66□□□□□ -0.86
SRRM4-204ENST00000641899 TRBV6-8A0A0A6YYG3 113 aa9.65□□□□□ -0.86
SRRM4-204ENST00000641899 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.65□□□□□ -0.86
SRRM4-204ENST00000641899 B4DEV8 164 aa9.65□□□□□ -0.86
SRRM4-204ENST00000641899 M0R036 132 aa9.65□□□□□ -0.86
SRRM4-204ENST00000641899 PRSS1P07477 247 aa9.65□□□□□ -0.86
SRRM4-204ENST00000641899 Q9UF83 564 aa9.65□□□□□ -0.86
SRRM4-204ENST00000641899 EPDR1Q9UM22 224 aa9.65□□□□□ -0.86
SRRM4-204ENST00000641899 IGKV3D-20A0A0C4DH25 116 aa9.64□□□□□ -0.87
SRRM4-204ENST00000641899 H3BVH4 76 aa9.64□□□□□ -0.87
SRRM4-204ENST00000641899 ARL14EPLP0DKL9 152 aa9.64□□□□□ -0.87
SRRM4-204ENST00000641899 BCL2P10415 239 aa9.64□□□□□ -0.87
SRRM4-204ENST00000641899 CEBPGP53567 150 aa9.64□□□□□ -0.87
SRRM4-204ENST00000641899 TMEM97Q5BJF2 176 aa9.64□□□□□ -0.87
SRRM4-204ENST00000641899 SDIM1Q6ZPB5 146 aa9.64□□□□□ -0.87
SRRM4-204ENST00000641899 CHCHD5Q9BSY4 110 aa9.64□□□□□ -0.87
SRRM4-204ENST00000641899 JPT2Q9H910 190 aa9.64□□□□□ -0.87
SRRM4-204ENST00000641899 TMEM167BQ9NRX6 74 aa9.64□□□□□ -0.87
SRRM4-204ENST00000641899 AP5S1Q9NUS5 200 aa9.64□□□□□ -0.87
SRRM4-204ENST00000641899 VAX2Q9UIW0 290 aa9.64□□□□□ -0.87
SRRM4-204ENST00000641899 PKHD1L1Q86WI1 4243 aa9.64□□□□□ -0.87
SRRM4-204ENST00000641899 RNF213Q63HN8 5207 aa9.63□□□□□ -0.87
SRRM4-204ENST00000641899 IGHV3-64A0A075B6Q5 118 aa9.63□□□□□ -0.87
SRRM4-204ENST00000641899 EIF3GO75821 320 aaKnown RBP eCLIP9.63□□□□□ -0.87
SRRM4-204ENST00000641899 TAGLN2P37802 199 aaKnown RBP9.63□□□□□ -0.87
SRRM4-204ENST00000641899 CDC34P49427 236 aaPredicted RBP9.63□□□□□ -0.87
SRRM4-204ENST00000641899 UBE2D3P61077 147 aa9.63□□□□□ -0.87
SRRM4-204ENST00000641899 UBE2D2P62837 147 aa9.63□□□□□ -0.87
SRRM4-204ENST00000641899 SUMO1P63165 101 aaKnown RBP9.63□□□□□ -0.87
SRRM4-204ENST00000641899 CBLN2Q8IUK8 224 aa9.63□□□□□ -0.87
SRRM4-204ENST00000641899 SFRP2Q96HF1 295 aa9.63□□□□□ -0.87
SRRM4-204ENST00000641899 RPS10P5Q9NQ39 176 aa9.63□□□□□ -0.87
SRRM4-204ENST00000641899 SMCO4Q9NRQ5 59 aa9.63□□□□□ -0.87
SRRM4-204ENST00000641899 LRP2P98164 4655 aa9.63□□□□□ -0.87
SRRM4-204ENST00000641899 A0A087WWL8 130 aa9.62□□□□□ -0.87
SRRM4-204ENST00000641899 HMGB3O15347 200 aaKnown RBP9.62□□□□□ -0.87
SRRM4-204ENST00000641899 ARMS2P0C7Q2 107 aa9.62□□□□□ -0.87
SRRM4-204ENST00000641899 RHEBQ15382 184 aa9.62□□□□□ -0.87
SRRM4-204ENST00000641899 MPV17L2Q567V2 206 aa9.62□□□□□ -0.87
SRRM4-204ENST00000641899 ZFP82Q8N141 532 aa9.62□□□□□ -0.87
SRRM4-204ENST00000641899 RAB24Q969Q5 203 aa9.62□□□□□ -0.87
SRRM4-204ENST00000641899 MANBALQ9NQG1 85 aa9.62□□□□□ -0.87
SRRM4-204ENST00000641899 C7orf77A4D0Y5 90 aa9.61□□□□□ -0.87
SRRM4-204ENST00000641899 CNBPP62633 177 aaKnown RBP9.61□□□□□ -0.87
SRRM4-204ENST00000641899 CIRBPQ14011 172 aaKnown RBP9.61□□□□□ -0.87
SRRM4-204ENST00000641899 DNLZQ5SXM8 178 aa9.61□□□□□ -0.87
SRRM4-204ENST00000641899 hDV102S1A0JD36 115 aa9.6□□□□□ -0.87
SRRM4-204ENST00000641899 M0R381 172 aa9.6□□□□□ -0.87
SRRM4-204ENST00000641899 STAG3L2P0CL84 134 aa9.6□□□□□ -0.87
SRRM4-204ENST00000641899 STAG3L3P0CL85 134 aa9.6□□□□□ -0.87
SRRM4-204ENST00000641899 GCHFRP30047 84 aa9.6□□□□□ -0.87
SRRM4-204ENST00000641899 OR10G8Q8NGN5 311 aa9.6□□□□□ -0.87
SRRM4-204ENST00000641899 LINC01600Q96MT4 127 aa9.6□□□□□ -0.87
SRRM4-204ENST00000641899 ARL2-SNX15V9GYD0 113 aa9.6□□□□□ -0.87
SRRM4-204ENST00000641899 CXorf1O96002 111 aa9.59□□□□□ -0.87
SRRM4-204ENST00000641899 AKR1C3P42330 323 aa9.59□□□□□ -0.87
SRRM4-204ENST00000641899 RAB4BP61018 213 aa9.59□□□□□ -0.87
SRRM4-204ENST00000641899 A0A087WYN8 130 aa9.58□□□□□ -0.88
SRRM4-204ENST00000641899 PANO1I0J062 215 aa9.58□□□□□ -0.88
SRRM4-204ENST00000641899 NDUFS6O75380 124 aaKnown RBP9.58□□□□□ -0.88
SRRM4-204ENST00000641899 MEF2BQ02080 365 aaPredicted RBP9.58□□□□□ -0.88
SRRM4-204ENST00000641899 REG3GQ6UW15 175 aa9.58□□□□□ -0.88
SRRM4-204ENST00000641899 PRR34Q9NV39 138 aa9.58□□□□□ -0.88
SRRM4-204ENST00000641899 LOC105371267A0A1B0GV96 52 aa9.57□□□□□ -0.88
SRRM4-204ENST00000641899 A0A1W2PRE2 83 aa9.57□□□□□ -0.88
SRRM4-204ENST00000641899 GZMBP10144 247 aa9.57□□□□□ -0.88
SRRM4-204ENST00000641899 ZNF56Q15929 161 aa9.57□□□□□ -0.88
SRRM4-204ENST00000641899 FAM162BQ5T6X4 162 aa9.57□□□□□ -0.88
SRRM4-204ENST00000641899 LINC00269Q8N2A0 174 aa9.57□□□□□ -0.88
SRRM4-204ENST00000641899 TRBV25-1A0A075B6N4 114 aa9.56□□□□□ -0.88
SRRM4-204ENST00000641899 TRAV8-4A0A0B4J246 113 aa9.56□□□□□ -0.88
SRRM4-204ENST00000641899 ZNF727A8MUV8 499 aa9.56□□□□□ -0.88
SRRM4-204ENST00000641899 TMEM250H0YL14 139 aa9.56□□□□□ -0.88
SRRM4-204ENST00000641899 PHOX2AO14813 284 aa9.56□□□□□ -0.88
SRRM4-204ENST00000641899 PAGE4O60829 102 aa9.56□□□□□ -0.88
SRRM4-204ENST00000641899 P01737 135 aa9.56□□□□□ -0.88
SRRM4-204ENST00000641899 PNRC1Q12796 327 aaPredicted RBP9.56□□□□□ -0.88
SRRM4-204ENST00000641899 WDR73Q6P4I2 378 aa9.56□□□□□ -0.88
SRRM4-204ENST00000641899 SPACA4Q8TDM5 124 aa9.56□□□□□ -0.88
SRRM4-204ENST00000641899 ZFP30Q9Y2G7 519 aa9.56□□□□□ -0.88
SRRM4-204ENST00000641899 TRAV34A0A0B4J273 112 aa9.55□□□□□ -0.88
SRRM4-204ENST00000641899 GRIFINA4D1Z8 144 aa9.55□□□□□ -0.88
SRRM4-204ENST00000641899 RBX1P62877 108 aa9.55□□□□□ -0.88
SRRM4-204ENST00000641899 CLPSL2Q6UWE3 100 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms