RNA–Protein interactions for RNA: ENST00000641009.1

LINC00339-211, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 1,450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-211ENST00000641009 TRBV6-8A0A0A6YYG3 113 aa9.14□□□□□ -0.95
LINC00339-211ENST00000641009 OR5AL1P0C617 328 aa9.14□□□□□ -0.95
LINC00339-211ENST00000641009 RPL35P42766 123 aaKnown RBP9.14□□□□□ -0.95
LINC00339-211ENST00000641009 ELOBQ15370 118 aa9.14□□□□□ -0.95
LINC00339-211ENST00000641009 GNG13Q9P2W3 67 aa9.14□□□□□ -0.95
LINC00339-211ENST00000641009 RBFOX3A6NFN3 312 aa9.13□□□□□ -0.95
LINC00339-211ENST00000641009 EIF5AP63241 154 aaKnown RBP9.13□□□□□ -0.95
LINC00339-211ENST00000641009 MPV17L2Q567V2 206 aa9.13□□□□□ -0.95
LINC00339-211ENST00000641009 ATRAIDQ6UW56 229 aa9.13□□□□□ -0.95
LINC00339-211ENST00000641009 Q8N976 141 aa9.13□□□□□ -0.95
LINC00339-211ENST00000641009 F5H697 171 aa9.12□□□□□ -0.95
LINC00339-211ENST00000641009 MANBALQ9NQG1 85 aa9.12□□□□□ -0.95
LINC00339-211ENST00000641009 GZMBP10144 247 aa9.11□□□□□ -0.95
LINC00339-211ENST00000641009 Q0VG73 95 aa9.11□□□□□ -0.95
LINC00339-211ENST00000641009 CENPWQ5EE01 88 aa9.11□□□□□ -0.95
LINC00339-211ENST00000641009 ENHOQ6UWT2 76 aa9.11□□□□□ -0.95
LINC00339-211ENST00000641009 C15orf54Q8N8G6 183 aa9.11□□□□□ -0.95
LINC00339-211ENST00000641009 C11orf52Q96A22 123 aa9.11□□□□□ -0.95
LINC00339-211ENST00000641009 KIF25-AS1Q9Y6Z4 181 aa9.11□□□□□ -0.95
LINC00339-211ENST00000641009 ANGP03950 147 aaKnown RBP9.1□□□□□ -0.95
LINC00339-211ENST00000641009 NTM-AS1Q6ZSK4 140 aa9.1□□□□□ -0.95
LINC00339-211ENST00000641009 SLC7A5P1Q8MH63 180 aa9.1□□□□□ -0.95
LINC00339-211ENST00000641009 LINC00528Q8N1L1 170 aa9.1□□□□□ -0.95
LINC00339-211ENST00000641009 AP1S3Q96PC3 154 aa9.1□□□□□ -0.95
LINC00339-211ENST00000641009 CHCHD5Q9BSY4 110 aa9.1□□□□□ -0.95
LINC00339-211ENST00000641009 C1orf43Q9BWL3 253 aa9.1□□□□□ -0.95
LINC00339-211ENST00000641009 IGLV2-8P01709 118 aa9.09□□□□□ -0.95
LINC00339-211ENST00000641009 CRPP02741 224 aa9.09□□□□□ -0.95
LINC00339-211ENST00000641009 SMIM17P0DL12 118 aa9.09□□□□□ -0.95
LINC00339-211ENST00000641009 SCXQ7RTU7 201 aa9.09□□□□□ -0.95
LINC00339-211ENST00000641009 TPPP3Q9BW30 176 aa9.09□□□□□ -0.95
LINC00339-211ENST00000641009 TRAV1-1A0A0B4J248 108 aa9.08□□□□□ -0.96
LINC00339-211ENST00000641009 RAB19A4D1S5 217 aa9.08□□□□□ -0.96
LINC00339-211ENST00000641009 PLA2G1BP04054 148 aaKnown RBP9.08□□□□□ -0.96
LINC00339-211ENST00000641009 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.08□□□□□ -0.96
LINC00339-211ENST00000641009 VAX2Q9UIW0 290 aa9.08□□□□□ -0.96
LINC00339-211ENST00000641009 MGPP08493 103 aa9.08□□□□□ -0.96
LINC00339-211ENST00000641009 IGLC6P0CF74 106 aa9.08□□□□□ -0.96
LINC00339-211ENST00000641009 RAB5CP51148 216 aa9.08□□□□□ -0.96
LINC00339-211ENST00000641009 FER1L6-AS1Q8NA97 138 aa9.08□□□□□ -0.96
LINC00339-211ENST00000641009 OR2D3Q8NGH3 330 aa9.08□□□□□ -0.96
LINC00339-211ENST00000641009 C19orf71A6NCJ1 209 aa9.07□□□□□ -0.96
LINC00339-211ENST00000641009 HLA-DQA1P01909 254 aa9.07□□□□□ -0.96
LINC00339-211ENST00000641009 CLPSL2Q6UWE3 100 aa9.07□□□□□ -0.96
LINC00339-211ENST00000641009 C9orf62Q8N4C0 152 aa9.07□□□□□ -0.96
LINC00339-211ENST00000641009 DAZAP1Q96EP5 407 aaKnown RBP9.07□□□□□ -0.96
LINC00339-211ENST00000641009 TEX46H3BTG2 121 aa9.06□□□□□ -0.96
LINC00339-211ENST00000641009 GNG4P50150 75 aa9.06□□□□□ -0.96
LINC00339-211ENST00000641009 SULT1A2P50226 295 aa9.06□□□□□ -0.96
LINC00339-211ENST00000641009 PKIAP61925 76 aa9.06□□□□□ -0.96
LINC00339-211ENST00000641009 MEF2BQ02080 365 aaPredicted RBP9.06□□□□□ -0.96
LINC00339-211ENST00000641009 GAGE6Q13070 117 aa9.06□□□□□ -0.96
LINC00339-211ENST00000641009 TMEM97Q5BJF2 176 aa9.06□□□□□ -0.96
LINC00339-211ENST00000641009 EIF5AL1Q6IS14 154 aaKnown RBP9.06□□□□□ -0.96
LINC00339-211ENST00000641009 CHAC1Q9BUX1 264 aa9.06□□□□□ -0.96
LINC00339-211ENST00000641009 LRP1Q07954 4544 aaKnown RBP9.06□□□□□ -0.96
LINC00339-211ENST00000641009 TRBV20OR9-2A0A075B6H5 130 aa9.05□□□□□ -0.96
LINC00339-211ENST00000641009 TRBV25-1A0A075B6N4 114 aa9.05□□□□□ -0.96
LINC00339-211ENST00000641009 USP17L23D6RBM5 183 aa9.05□□□□□ -0.96
LINC00339-211ENST00000641009 M0QY20 66 aa9.05□□□□□ -0.96
LINC00339-211ENST00000641009 RPS20P60866 119 aaKnown RBP9.05□□□□□ -0.96
LINC00339-211ENST00000641009 RBX1P62877 108 aa9.05□□□□□ -0.96
LINC00339-211ENST00000641009 MIAQ16674 131 aa9.05□□□□□ -0.96
LINC00339-211ENST00000641009 C14orf177Q52M58 125 aa9.05□□□□□ -0.96
LINC00339-211ENST00000641009 SUMO4Q6EEV6 95 aa9.05□□□□□ -0.96
LINC00339-211ENST00000641009 CIRBP-AS1Q8TBR5 109 aa9.05□□□□□ -0.96
LINC00339-211ENST00000641009 PDE6DO43924 150 aa9.04□□□□□ -0.96
LINC00339-211ENST00000641009 CACNG7P62955 275 aa9.04□□□□□ -0.96
LINC00339-211ENST00000641009 LINC00269Q8N2A0 174 aa9.04□□□□□ -0.96
LINC00339-211ENST00000641009 SMIM12Q96EX1 92 aa9.04□□□□□ -0.96
LINC00339-211ENST00000641009 PRR34Q9NV39 138 aa9.04□□□□□ -0.96
LINC00339-211ENST00000641009 MED9Q9NWA0 146 aa9.04□□□□□ -0.96
LINC00339-211ENST00000641009 IGHV1-24A0A0C4DH33 117 aa9.03□□□□□ -0.96
LINC00339-211ENST00000641009 J3QL48 77 aa9.03□□□□□ -0.96
LINC00339-211ENST00000641009 P01737 135 aa9.03□□□□□ -0.96
LINC00339-211ENST00000641009 IQCJQ1A5X6 159 aa9.03□□□□□ -0.96
LINC00339-211ENST00000641009 XKRY2A2RUG3 117 aa9.02□□□□□ -0.96
LINC00339-211ENST00000641009 H7C1H1 209 aa9.02□□□□□ -0.96
LINC00339-211ENST00000641009 IFNA1P01562 189 aa9.02□□□□□ -0.96
LINC00339-211ENST00000641009 PRSS1P07477 247 aa9.02□□□□□ -0.96
LINC00339-211ENST00000641009 BCL2P10415 239 aa9.02□□□□□ -0.96
LINC00339-211ENST00000641009 KRTAP26-1Q6PEX3 210 aa9.02□□□□□ -0.96
LINC00339-211ENST00000641009 LYZL1Q6UWQ5 148 aa9.02□□□□□ -0.96
LINC00339-211ENST00000641009 F2Z2F3 143 aa9.02□□□□□ -0.97
LINC00339-211ENST00000641009 NTF3P20783 257 aa9.02□□□□□ -0.97
LINC00339-211ENST00000641009 RASL11AQ6T310 242 aa9.02□□□□□ -0.97
LINC00339-211ENST00000641009 DEFB104AQ8WTQ1 72 aa9.02□□□□□ -0.97
LINC00339-211ENST00000641009 PKHD1L1Q86WI1 4243 aa9.02□□□□□ -0.97
LINC00339-211ENST00000641009 FAT3Q8TDW7 4589 aa9.01□□□□□ -0.97
LINC00339-211ENST00000641009 TRGC1P0CF51 173 aa9.01□□□□□ -0.97
LINC00339-211ENST00000641009 KRTAP10-4P60372 401 aaPredicted RBP9.01□□□□□ -0.97
LINC00339-211ENST00000641009 SLC51BQ86UW2 128 aa9.01□□□□□ -0.97
LINC00339-211ENST00000641009 NUDT10Q8NFP7 164 aa9.01□□□□□ -0.97
LINC00339-211ENST00000641009 NUDT11Q96G61 164 aa9.01□□□□□ -0.97
LINC00339-211ENST00000641009 IGLV10-54A0A075B6I4 117 aa9□□□□□ -0.97
LINC00339-211ENST00000641009 LINC00862A6NCI5 91 aa9□□□□□ -0.97
LINC00339-211ENST00000641009 REG3AQ06141 175 aa9□□□□□ -0.97
LINC00339-211ENST00000641009 TEX261Q6UWH6 196 aa9□□□□□ -0.97
LINC00339-211ENST00000641009 C20orf203Q8NBC4 194 aa9□□□□□ -0.97
LINC00339-211ENST00000641009 DPH3P1Q9H4G8 78 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms