RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 NTM-AS1Q6ZSK4 140 aa4.87□□□□□ -1.63
SCARB2-226ENST00000640916 C15orf56Q8N910 161 aa4.87□□□□□ -1.63
SCARB2-226ENST00000640916 GFRA4Q9GZZ7 299 aa4.87□□□□□ -1.63
SCARB2-226ENST00000640916 GEMIN7Q9H840 131 aaKnown RBP4.87□□□□□ -1.63
SCARB2-226ENST00000640916 TRBV7-3A0A075B6L6 115 aa4.86□□□□□ -1.63
SCARB2-226ENST00000640916 IGKV3D-20A0A0C4DH25 116 aa4.86□□□□□ -1.63
SCARB2-226ENST00000640916 RPS10P46783 165 aaKnown RBP4.86□□□□□ -1.63
SCARB2-226ENST00000640916 AP3S2P59780 193 aa4.86□□□□□ -1.63
SCARB2-226ENST00000640916 RBX1P62877 108 aa4.86□□□□□ -1.63
SCARB2-226ENST00000640916 BAXQ07812 192 aa4.86□□□□□ -1.63
SCARB2-226ENST00000640916 CD164L2Q6UWJ8 174 aa4.86□□□□□ -1.63
SCARB2-226ENST00000640916 GOLT1AQ6ZVE7 132 aa4.86□□□□□ -1.63
SCARB2-226ENST00000640916 KRTAP9-8Q9BYQ0 159 aa4.86□□□□□ -1.63
SCARB2-226ENST00000640916 PCP4L1A6NKN8 68 aa4.85□□□□□ -1.63
SCARB2-226ENST00000640916 PTTG1O95997 202 aa4.85□□□□□ -1.63
SCARB2-226ENST00000640916 KRTAP1-4P0C5Y4 121 aa4.85□□□□□ -1.63
SCARB2-226ENST00000640916 IL7P13232 177 aa4.85□□□□□ -1.63
SCARB2-226ENST00000640916 FGF7P21781 194 aa4.85□□□□□ -1.63
SCARB2-226ENST00000640916 BTCP35070 178 aa4.85□□□□□ -1.63
SCARB2-226ENST00000640916 SUMO2P61956 95 aaKnown RBP4.85□□□□□ -1.63
SCARB2-226ENST00000640916 IAH1Q2TAA2 248 aaPredicted RBP4.85□□□□□ -1.63
SCARB2-226ENST00000640916 CNPY1Q3B7I2 92 aa4.85□□□□□ -1.63
SCARB2-226ENST00000640916 INO80EQ8NBZ0 244 aaPredicted RBP4.85□□□□□ -1.63
SCARB2-226ENST00000640916 OR10G8Q8NGN5 311 aa4.85□□□□□ -1.63
SCARB2-226ENST00000640916 SGK494Q96LW2 274 aa4.85□□□□□ -1.63
SCARB2-226ENST00000640916 HYLS1Q96M11 299 aa4.85□□□□□ -1.63
SCARB2-226ENST00000640916 SLC25A21Q9BQT8 299 aaPredicted RBP4.85□□□□□ -1.63
SCARB2-226ENST00000640916 NPCDR1Q9BY65 106 aa4.85□□□□□ -1.63
SCARB2-226ENST00000640916 TRBV10-1A0A0K0K1A3 114 aa4.84□□□□□ -1.63
SCARB2-226ENST00000640916 A0A1W2PPV4 95 aa4.84□□□□□ -1.63
SCARB2-226ENST00000640916 IGSF23A1L1A6 192 aa4.84□□□□□ -1.63
SCARB2-226ENST00000640916 RHODO00212 210 aa4.84□□□□□ -1.63
SCARB2-226ENST00000640916 IFNA7P01567 189 aa4.84□□□□□ -1.63
SCARB2-226ENST00000640916 SEC61GP60059 68 aa4.84□□□□□ -1.63
SCARB2-226ENST00000640916 GNG5P63218 68 aa4.84□□□□□ -1.63
SCARB2-226ENST00000640916 RPL36AP83881 106 aaKnown RBP4.84□□□□□ -1.63
SCARB2-226ENST00000640916 REG3AQ06141 175 aa4.84□□□□□ -1.63
SCARB2-226ENST00000640916 C20orf203Q8NBC4 194 aa4.84□□□□□ -1.63
SCARB2-226ENST00000640916 RPL36ALQ969Q0 106 aaKnown RBP4.84□□□□□ -1.63
SCARB2-226ENST00000640916 CHCHD5Q9BSY4 110 aa4.84□□□□□ -1.63
SCARB2-226ENST00000640916 NMES1Q9C002 83 aa4.84□□□□□ -1.63
SCARB2-226ENST00000640916 OTORQ9NRC9 128 aa4.84□□□□□ -1.63
SCARB2-226ENST00000640916 GSKIPQ9P0R6 139 aa4.84□□□□□ -1.63
SCARB2-226ENST00000640916 PLA2G10O15496 165 aa4.83□□□□□ -1.64
SCARB2-226ENST00000640916 OR7C2O60412 319 aa4.83□□□□□ -1.64
SCARB2-226ENST00000640916 NDUFB6O95139 128 aa4.83□□□□□ -1.64
SCARB2-226ENST00000640916 GCGP01275 180 aa4.83□□□□□ -1.64
SCARB2-226ENST00000640916 MBP02144 154 aa4.83□□□□□ -1.64
SCARB2-226ENST00000640916 RAB5CP51148 216 aa4.83□□□□□ -1.64
SCARB2-226ENST00000640916 BCAP31P51572 246 aa4.83□□□□□ -1.64
SCARB2-226ENST00000640916 GAGE6Q13070 117 aa4.83□□□□□ -1.64
SCARB2-226ENST00000640916 FAM74A4Q5TZK3 123 aa4.83□□□□□ -1.64
SCARB2-226ENST00000640916 KRTAP5-3Q6L8H2 238 aa4.83□□□□□ -1.64
SCARB2-226ENST00000640916 NEXN-AS1Q8NBZ9 246 aa4.83□□□□□ -1.64
SCARB2-226ENST00000640916 SFRP2Q96HF1 295 aa4.83□□□□□ -1.64
SCARB2-226ENST00000640916 SEC22CQ9BRL7 303 aa4.83□□□□□ -1.64
SCARB2-226ENST00000640916 IGLV1-50A0A075B6I6 118 aa4.82□□□□□ -1.64
SCARB2-226ENST00000640916 TRAV8-4A0A0B4J246 113 aa4.82□□□□□ -1.64
SCARB2-226ENST00000640916 CENPXA8MT69 81 aa4.82□□□□□ -1.64
SCARB2-226ENST00000640916 LYRM1O43325 122 aa4.82□□□□□ -1.64
SCARB2-226ENST00000640916 EIF3GO75821 320 aaKnown RBP eCLIP4.82□□□□□ -1.64
SCARB2-226ENST00000640916 P01737 135 aa4.82□□□□□ -1.64
SCARB2-226ENST00000640916 S100A11P31949 105 aa4.82□□□□□ -1.64
SCARB2-226ENST00000640916 SULT1A1P50225 295 aa4.82□□□□□ -1.64
SCARB2-226ENST00000640916 S100A10P60903 97 aa4.82□□□□□ -1.64
SCARB2-226ENST00000640916 SNRPEP62304 92 aaKnown RBP4.82□□□□□ -1.64
SCARB2-226ENST00000640916 UBE2L3P68036 154 aaKnown RBP4.82□□□□□ -1.64
SCARB2-226ENST00000640916 HIGD2BQ4VC39 106 aa4.82□□□□□ -1.64
SCARB2-226ENST00000640916 TMEM252Q8N6L7 170 aa4.82□□□□□ -1.64
SCARB2-226ENST00000640916 IL36BQ9NZH7 164 aa4.82□□□□□ -1.64
SCARB2-226ENST00000640916 OR5AC2Q9NZP5 309 aa4.82□□□□□ -1.64
SCARB2-226ENST00000640916 MBD2Q9UBB5 411 aa4.82□□□□□ -1.64
SCARB2-226ENST00000640916 IGLV4-60A0A075B6I1 120 aa4.81□□□□□ -1.64
SCARB2-226ENST00000640916 A0A1W2PNN7 141 aa4.81□□□□□ -1.64
SCARB2-226ENST00000640916 NAP1L6A6NFF2 107 aa4.81□□□□□ -1.64
SCARB2-226ENST00000640916 GZMBP10144 247 aa4.81□□□□□ -1.64
SCARB2-226ENST00000640916 PKIAP61925 76 aa4.81□□□□□ -1.64
SCARB2-226ENST00000640916 DNLZQ5SXM8 178 aa4.81□□□□□ -1.64
SCARB2-226ENST00000640916 THAP6Q8TBB0 222 aa4.81□□□□□ -1.64
SCARB2-226ENST00000640916 LSM5Q9Y4Y9 91 aaKnown RBP4.81□□□□□ -1.64
SCARB2-226ENST00000640916 H0Y9J4 135 aa4.8□□□□□ -1.64
SCARB2-226ENST00000640916 H3BVH4 76 aa4.8□□□□□ -1.64
SCARB2-226ENST00000640916 IFITM3Q01628 133 aa4.8□□□□□ -1.64
SCARB2-226ENST00000640916 ATP6V1FQ16864 119 aa4.8□□□□□ -1.64
SCARB2-226ENST00000640916 SMUG1Q53HV7 270 aa4.8□□□□□ -1.64
SCARB2-226ENST00000640916 FER1L6-AS1Q8NA97 138 aa4.8□□□□□ -1.64
SCARB2-226ENST00000640916 CMTM2Q8TAZ6 248 aa4.8□□□□□ -1.64
SCARB2-226ENST00000640916 LYRM2Q9NU23 88 aaPredicted RBP4.8□□□□□ -1.64
SCARB2-226ENST00000640916 LINC00474Q9P2X8 69 aa4.8□□□□□ -1.64
SCARB2-226ENST00000640916 PSG8Q9UQ74 426 aa4.8□□□□□ -1.64
SCARB2-226ENST00000640916 GVQW2A0A096LPI5 108 aaPredicted RBP4.79□□□□□ -1.64
SCARB2-226ENST00000640916 TSPAN13O95857 204 aa4.79□□□□□ -1.64
SCARB2-226ENST00000640916 IGLV7-43P04211 117 aa4.79□□□□□ -1.64
SCARB2-226ENST00000640916 ARMS2P0C7Q2 107 aa4.79□□□□□ -1.64
SCARB2-226ENST00000640916 S100A4P26447 101 aaKnown RBP4.79□□□□□ -1.64
SCARB2-226ENST00000640916 LINC01547P58512 204 aaPredicted RBP4.79□□□□□ -1.64
SCARB2-226ENST00000640916 HERV-K104P63124 156 aa4.79□□□□□ -1.64
SCARB2-226ENST00000640916 BLOC1S1P78537 153 aa4.79□□□□□ -1.64
SCARB2-226ENST00000640916 FOXI1Q12951 378 aa4.79□□□□□ -1.64
SCARB2-226ENST00000640916 IL15RAQ13261 267 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms