RNA–Protein interactions for RNA: ENST00000640872.1

PAX6-280, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-280ENST00000640872 DOPEY1Q5JWR5 2465 aa10.18□□□□□ -0.78
PAX6-280ENST00000640872 C9JAW5 83 aa10.18□□□□□ -0.78
PAX6-280ENST00000640872 H3BUA1 57 aa10.18□□□□□ -0.78
PAX6-280ENST00000640872 P0DMU3 169 aa10.18□□□□□ -0.78
PAX6-280ENST00000640872 FAM231AP0DMU4 169 aa10.18□□□□□ -0.78
PAX6-280ENST00000640872 FAM231CP0DMU5 169 aa10.18□□□□□ -0.78
PAX6-280ENST00000640872 RHOHQ15669 191 aa10.18□□□□□ -0.78
PAX6-280ENST00000640872 TRPT1Q86TN4 253 aaKnown RBP10.18□□□□□ -0.78
PAX6-280ENST00000640872 CITED1Q99966 193 aa10.18□□□□□ -0.78
PAX6-280ENST00000640872 ZNF256Q9Y2P7 627 aaPredicted RBP10.18□□□□□ -0.78
PAX6-280ENST00000640872 LRRK2Q5S007 2527 aa10.18□□□□□ -0.78
PAX6-280ENST00000640872 ZANQ9Y493 2812 aa10.18□□□□□ -0.78
PAX6-280ENST00000640872 IGHV3OR16-10A0A075B7F0 116 aa10.17□□□□□ -0.78
PAX6-280ENST00000640872 ZNF22P17026 224 aaPredicted RBP10.17□□□□□ -0.78
PAX6-280ENST00000640872 C9orf85Q96MD7 179 aa10.17□□□□□ -0.78
PAX6-280ENST00000640872 M0QY20 66 aa10.17□□□□□ -0.78
PAX6-280ENST00000640872 MUSTN1Q8IVN3 82 aa10.17□□□□□ -0.78
PAX6-280ENST00000640872 TRAV2A0A0B4J234 112 aa10.16□□□□□ -0.78
PAX6-280ENST00000640872 TRAV12-3A0A0B4J271 114 aa10.16□□□□□ -0.78
PAX6-280ENST00000640872 SRD5A1P18405 259 aa10.16□□□□□ -0.78
PAX6-280ENST00000640872 FAM74A4Q5TZK3 123 aa10.16□□□□□ -0.78
PAX6-280ENST00000640872 ABCA2Q9BZC7 2435 aa10.16□□□□□ -0.78
PAX6-280ENST00000640872 ZNF462Q96JM2 2506 aa10.16□□□□□ -0.78
PAX6-280ENST00000640872 IGHV3-16A0A0C4DH30 117 aa10.16□□□□□ -0.78
PAX6-280ENST00000640872 A0A0J9YX75 114 aa10.16□□□□□ -0.78
PAX6-280ENST00000640872 RHODO00212 210 aa10.16□□□□□ -0.78
PAX6-280ENST00000640872 EDN2P20800 178 aa10.16□□□□□ -0.78
PAX6-280ENST00000640872 ZFAND6Q6FIF0 208 aa10.16□□□□□ -0.78
PAX6-280ENST00000640872 DAZ1Q9NQZ3 744 aaKnown RBP10.16□□□□□ -0.78
PAX6-280ENST00000640872 GATA3P23771 443 aa10.15□□□□□ -0.78
PAX6-280ENST00000640872 DCANP1Q8TF63 244 aa10.15□□□□□ -0.78
PAX6-280ENST00000640872 LINC01600Q96MT4 127 aa10.15□□□□□ -0.78
PAX6-280ENST00000640872 MDFICQ9P1T7 246 aa10.15□□□□□ -0.78
PAX6-280ENST00000640872 M0R2P5 195 aa10.15□□□□□ -0.79
PAX6-280ENST00000640872 IGHG2P01859 326 aa10.15□□□□□ -0.79
PAX6-280ENST00000640872 ELANEP08246 267 aa10.15□□□□□ -0.79
PAX6-280ENST00000640872 C20orf203Q8NBC4 194 aa10.15□□□□□ -0.79
PAX6-280ENST00000640872 ANAPC13Q9BS18 74 aa10.15□□□□□ -0.79
PAX6-280ENST00000640872 USP9YO00507 2555 aaPredicted RBP10.14□□□□□ -0.79
PAX6-280ENST00000640872 ZNF56Q15929 161 aa10.14□□□□□ -0.79
PAX6-280ENST00000640872 BRD3OSQ6XYD6 125 aa10.14□□□□□ -0.79
PAX6-280ENST00000640872 TEX29Q8N6K0 151 aa10.14□□□□□ -0.79
PAX6-280ENST00000640872 FAM208BQ5VWN6 2430 aa10.14□□□□□ -0.79
PAX6-280ENST00000640872 EPG5Q9HCE0 2579 aa10.14□□□□□ -0.79
PAX6-280ENST00000640872 FBN2P35556 2912 aa10.14□□□□□ -0.79
PAX6-280ENST00000640872 IGHV3-64A0A075B6Q5 118 aa10.14□□□□□ -0.79
PAX6-280ENST00000640872 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.14□□□□□ -0.79
PAX6-280ENST00000640872 H7C2G1 150 aa10.14□□□□□ -0.79
PAX6-280ENST00000640872 PF4V1P10720 104 aa10.14□□□□□ -0.79
PAX6-280ENST00000640872 ID1P41134 155 aa10.14□□□□□ -0.79
PAX6-280ENST00000640872 IGLV4-3A0A075B6K6 122 aa10.13□□□□□ -0.79
PAX6-280ENST00000640872 A0A0J9YXV3 536 aa10.13□□□□□ -0.79
PAX6-280ENST00000640872 ATXN8Q156A1 80 aa10.13□□□□□ -0.79
PAX6-280ENST00000640872 LINC01620Q4KN68 170 aa10.13□□□□□ -0.79
PAX6-280ENST00000640872 ZNF580Q9UK33 172 aa10.13□□□□□ -0.79
PAX6-280ENST00000640872 A0A0J9YXY3 114 aa10.12□□□□□ -0.79
PAX6-280ENST00000640872 Q8N1Y9 231 aa10.12□□□□□ -0.79
PAX6-280ENST00000640872 NTN5Q8WTR8 489 aaPredicted RBP10.12□□□□□ -0.79
PAX6-280ENST00000640872 ODF3Q96PU9 254 aa10.12□□□□□ -0.79
PAX6-280ENST00000640872 LY6EQ16553 131 aa10.12□□□□□ -0.79
PAX6-280ENST00000640872 K7EMT4 169 aa10.11□□□□□ -0.79
PAX6-280ENST00000640872 IGLV1-40P01703 118 aa10.11□□□□□ -0.79
PAX6-280ENST00000640872 LITAFQ99732 161 aa10.11□□□□□ -0.79
PAX6-280ENST00000640872 TRBV30A0A0K0K1B3 111 aa10.11□□□□□ -0.79
PAX6-280ENST00000640872 I3L3M4 83 aa10.11□□□□□ -0.79
PAX6-280ENST00000640872 NHLRC4P0CG21 123 aaPredicted RBP10.11□□□□□ -0.79
PAX6-280ENST00000640872 RPL13AP40429 203 aaKnown RBP10.11□□□□□ -0.79
PAX6-280ENST00000640872 Q1RN00 199 aa10.11□□□□□ -0.79
PAX6-280ENST00000640872 A6NDX4 124 aa10.1□□□□□ -0.79
PAX6-280ENST00000640872 TRAV12-2A0A075B6T6 113 aa10.1□□□□□ -0.79
PAX6-280ENST00000640872 TRIAP1O43715 76 aa10.1□□□□□ -0.79
PAX6-280ENST00000640872 TRBV10-2A0A0K0K1G8 114 aa10.09□□□□□ -0.79
PAX6-280ENST00000640872 IGHV3-30-3P0DP02 117 aa10.09□□□□□ -0.79
PAX6-280ENST00000640872 BLCAPP62952 87 aa10.09□□□□□ -0.79
PAX6-280ENST00000640872 FAM104AQ969W3 186 aa10.09□□□□□ -0.79
PAX6-280ENST00000640872 IGHV1OR15-1A0A075B7D0 117 aa10.09□□□□□ -0.79
PAX6-280ENST00000640872 TRAV4A0A0B4J268 109 aa10.09□□□□□ -0.79
PAX6-280ENST00000640872 CRLF1O75462 422 aa10.09□□□□□ -0.79
PAX6-280ENST00000640872 IGHV4-39P01824 125 aa10.09□□□□□ -0.79
PAX6-280ENST00000640872 CFHR3Q02985 330 aa10.09□□□□□ -0.79
PAX6-280ENST00000640872 ABCA12Q86UK0 2595 aa10.08□□□□□ -0.8
PAX6-280ENST00000640872 H3BUX3 64 aa10.08□□□□□ -0.8
PAX6-280ENST00000640872 SNCGO76070 127 aa10.08□□□□□ -0.8
PAX6-280ENST00000640872 IGHV4-38-2P0DP08 117 aa10.08□□□□□ -0.8
PAX6-280ENST00000640872 GAGE5Q13069 117 aa10.08□□□□□ -0.8
PAX6-280ENST00000640872 GAGE6Q13070 117 aa10.08□□□□□ -0.8
PAX6-280ENST00000640872 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.08□□□□□ -0.8
PAX6-280ENST00000640872 TEX49A0A1B0GTD5 131 aa10.08□□□□□ -0.8
PAX6-280ENST00000640872 GAGE2BQ13066 116 aa10.08□□□□□ -0.8
PAX6-280ENST00000640872 GAGE2EQ4V326 116 aa10.08□□□□□ -0.8
PAX6-280ENST00000640872 TIMM21Q9BVV7 248 aa10.08□□□□□ -0.8
PAX6-280ENST00000640872 GAGE2DQ9UEU5 116 aa10.08□□□□□ -0.8
PAX6-280ENST00000640872 PYGO1Q9Y3Y4 419 aa10.08□□□□□ -0.8
PAX6-280ENST00000640872 ADARB2-AS1A8MUL3 147 aa10.07□□□□□ -0.8
PAX6-280ENST00000640872 IGKV3-20P01619 116 aa10.07□□□□□ -0.8
PAX6-280ENST00000640872 MRPS36P82909 103 aaKnown RBP10.07□□□□□ -0.8
PAX6-280ENST00000640872 SPXQ9BT56 116 aa10.07□□□□□ -0.8
PAX6-280ENST00000640872 BEX4Q9NWD9 120 aaPredicted RBP10.07□□□□□ -0.8
PAX6-280ENST00000640872 CSPG4Q6UVK1 2322 aa10.07□□□□□ -0.8
PAX6-280ENST00000640872 NDUFV3P56181 108 aaKnown RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms