RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 TRBV7-3A0A075B6L6 115 aa9.06□□□□□ -0.96
GTF3A-209ENST00000640289 A0A1B0GXF2 115 aa9.06□□□□□ -0.96
GTF3A-209ENST00000640289 GAS8-AS1O95177 125 aa9.06□□□□□ -0.96
GTF3A-209ENST00000640289 UBE2D3P61077 147 aa9.06□□□□□ -0.96
GTF3A-209ENST00000640289 UBE2D2P62837 147 aa9.06□□□□□ -0.96
GTF3A-209ENST00000640289 UPK3BQ9BT76 320 aa9.06□□□□□ -0.96
GTF3A-209ENST00000640289 GTSF1LQ9H1H1 148 aa9.06□□□□□ -0.96
GTF3A-209ENST00000640289 RPS10P5Q9NQ39 176 aa9.06□□□□□ -0.96
GTF3A-209ENST00000640289 IGHV3-38A0A0C4DH36 116 aa9.05□□□□□ -0.96
GTF3A-209ENST00000640289 H7C1H1 209 aa9.05□□□□□ -0.96
GTF3A-209ENST00000640289 RAB4AP20338 218 aa9.05□□□□□ -0.96
GTF3A-209ENST00000640289 HBBP68871 147 aa9.05□□□□□ -0.96
GTF3A-209ENST00000640289 NDUFA5Q16718 116 aa9.05□□□□□ -0.96
GTF3A-209ENST00000640289 RASL11AQ6T310 242 aa9.05□□□□□ -0.96
GTF3A-209ENST00000640289 RPL39LQ96EH5 51 aaKnown RBP9.05□□□□□ -0.96
GTF3A-209ENST00000640289 KMT2AQ03164 3969 aa9.04□□□□□ -0.96
GTF3A-209ENST00000640289 A0A1B0GW15 77 aa9.04□□□□□ -0.96
GTF3A-209ENST00000640289 M0R2N4 97 aa9.04□□□□□ -0.96
GTF3A-209ENST00000640289 TIRAPP58753 221 aa9.04□□□□□ -0.96
GTF3A-209ENST00000640289 RHEBQ15382 184 aa9.04□□□□□ -0.96
GTF3A-209ENST00000640289 WFDC10BQ8IUB3 73 aa9.04□□□□□ -0.96
GTF3A-209ENST00000640289 SVBPQ8N300 66 aa9.04□□□□□ -0.96
GTF3A-209ENST00000640289 IMMP2LQ96T52 175 aa9.04□□□□□ -0.96
GTF3A-209ENST00000640289 Q9H8V8 135 aa9.04□□□□□ -0.96
GTF3A-209ENST00000640289 NIT2Q9NQR4 276 aa9.04□□□□□ -0.96
GTF3A-209ENST00000640289 TNFRSF18Q9Y5U5 241 aa9.04□□□□□ -0.96
GTF3A-209ENST00000640289 A0A087WWC5 75 aa9.03□□□□□ -0.96
GTF3A-209ENST00000640289 SMKR1H3BMG3 65 aa9.03□□□□□ -0.96
GTF3A-209ENST00000640289 SNAPINO95295 136 aa9.03□□□□□ -0.96
GTF3A-209ENST00000640289 FAM104BQ5XKR9 115 aa9.03□□□□□ -0.96
GTF3A-209ENST00000640289 ATP5L2Q7Z4Y8 100 aa9.03□□□□□ -0.96
GTF3A-209ENST00000640289 BTF3L4Q96K17 158 aa9.03□□□□□ -0.96
GTF3A-209ENST00000640289 DNAJC30Q96LL9 226 aa9.03□□□□□ -0.96
GTF3A-209ENST00000640289 URGCP-MRPS24S4R325 110 aa9.03□□□□□ -0.96
GTF3A-209ENST00000640289 NCR2O95944 276 aa9.02□□□□□ -0.97
GTF3A-209ENST00000640289 S100A8P05109 93 aa9.02□□□□□ -0.97
GTF3A-209ENST00000640289 MRPL51Q4U2R6 128 aaKnown RBP9.02□□□□□ -0.97
GTF3A-209ENST00000640289 OR10J3Q5JRS4 329 aa9.02□□□□□ -0.97
GTF3A-209ENST00000640289 LELP1Q5T871 98 aa9.02□□□□□ -0.97
GTF3A-209ENST00000640289 KCNIP4Q6PIL6 250 aa9.02□□□□□ -0.97
GTF3A-209ENST00000640289 DEFB104AQ8WTQ1 72 aa9.02□□□□□ -0.97
GTF3A-209ENST00000640289 TMEM242Q9NWH2 141 aa9.02□□□□□ -0.97
GTF3A-209ENST00000640289 DNAH6Q9C0G6 4158 aa9.01□□□□□ -0.97
GTF3A-209ENST00000640289 SIVA1O15304 175 aa9.01□□□□□ -0.97
GTF3A-209ENST00000640289 RPS10P46783 165 aaKnown RBP9.01□□□□□ -0.97
GTF3A-209ENST00000640289 ATRAIDQ6UW56 229 aa9.01□□□□□ -0.97
GTF3A-209ENST00000640289 MRAP2Q96G30 205 aa9.01□□□□□ -0.97
GTF3A-209ENST00000640289 NBDYA0A0U1RRE5 68 aa9□□□□□ -0.97
GTF3A-209ENST00000640289 S100PP25815 95 aa9□□□□□ -0.97
GTF3A-209ENST00000640289 DAZ4Q86SG3 579 aaKnown RBP9□□□□□ -0.97
GTF3A-209ENST00000640289 FRZBQ92765 325 aa9□□□□□ -0.97
GTF3A-209ENST00000640289 KRTAP1-5Q9BYS1 174 aa9□□□□□ -0.97
GTF3A-209ENST00000640289 DAZ3Q9NR90 486 aaKnown RBP9□□□□□ -0.97
GTF3A-209ENST00000640289 TRAV8-6A0A0B4J262 113 aa8.99□□□□□ -0.97
GTF3A-209ENST00000640289 Q6ZR54 194 aa8.99□□□□□ -0.97
GTF3A-209ENST00000640289 NTM-AS1Q6ZSK4 140 aa8.99□□□□□ -0.97
GTF3A-209ENST00000640289 TRAV9-1A0A075B6T8 112 aa8.98□□□□□ -0.97
GTF3A-209ENST00000640289 TRBV6-8A0A0A6YYG3 113 aa8.98□□□□□ -0.97
GTF3A-209ENST00000640289 TRBV6-5A0A0K0K1A5 114 aa8.98□□□□□ -0.97
GTF3A-209ENST00000640289 SDHAF1A6NFY7 115 aa8.98□□□□□ -0.97
GTF3A-209ENST00000640289 D6R8Y8 96 aa8.98□□□□□ -0.97
GTF3A-209ENST00000640289 Q8N3U1 123 aa8.98□□□□□ -0.97
GTF3A-209ENST00000640289 NRACQ8N912 160 aa8.98□□□□□ -0.97
GTF3A-209ENST00000640289 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.98□□□□□ -0.97
GTF3A-209ENST00000640289 IGHV3-30P01768 117 aa8.97□□□□□ -0.97
GTF3A-209ENST00000640289 IGHV3-33P01772 117 aa8.97□□□□□ -0.97
GTF3A-209ENST00000640289 DNAH10OSP0CZ25 163 aa8.97□□□□□ -0.97
GTF3A-209ENST00000640289 IGHV3-30-3P0DP02 117 aa8.97□□□□□ -0.97
GTF3A-209ENST00000640289 IGHV3-30-5P0DP03 117 aa8.97□□□□□ -0.97
GTF3A-209ENST00000640289 CKS2P33552 79 aa8.97□□□□□ -0.97
GTF3A-209ENST00000640289 TMEM136Q6ZRR5 245 aa8.97□□□□□ -0.97
GTF3A-209ENST00000640289 ST20Q9HBF5 79 aa8.97□□□□□ -0.97
GTF3A-209ENST00000640289 TGIF2-C20orf24A0A0A6YYL0 155 aa8.96□□□□□ -0.98
GTF3A-209ENST00000640289 NPYP01303 97 aa8.95□□□□□ -0.98
GTF3A-209ENST00000640289 POLR2KP53803 58 aaKnown RBP8.95□□□□□ -0.98
GTF3A-209ENST00000640289 ELOBQ15370 118 aa8.95□□□□□ -0.98
GTF3A-209ENST00000640289 TMEM97Q5BJF2 176 aa8.95□□□□□ -0.98
GTF3A-209ENST00000640289 TTC32Q5I0X7 151 aa8.95□□□□□ -0.98
GTF3A-209ENST00000640289 LINC01556Q5JQF7 62 aa8.95□□□□□ -0.98
GTF3A-209ENST00000640289 NIT1Q86X76 327 aa8.95□□□□□ -0.98
GTF3A-209ENST00000640289 TMEM70Q9BUB7 260 aa8.95□□□□□ -0.98
GTF3A-209ENST00000640289 TRBV25-1A0A075B6N4 114 aa8.94□□□□□ -0.98
GTF3A-209ENST00000640289 IGHV1-24A0A0C4DH33 117 aa8.94□□□□□ -0.98
GTF3A-209ENST00000640289 TNFRSF6BO95407 300 aa8.94□□□□□ -0.98
GTF3A-209ENST00000640289 PMCHP20382 165 aa8.94□□□□□ -0.98
GTF3A-209ENST00000640289 SUMO2P61956 95 aaKnown RBP8.94□□□□□ -0.98
GTF3A-209ENST00000640289 COTL1Q14019 142 aa8.94□□□□□ -0.98
GTF3A-209ENST00000640289 IQCJQ1A5X6 159 aa8.94□□□□□ -0.98
GTF3A-209ENST00000640289 ORMDL3Q8N138 153 aa8.94□□□□□ -0.98
GTF3A-209ENST00000640289 CHCHD5Q9BSY4 110 aa8.94□□□□□ -0.98
GTF3A-209ENST00000640289 TRBV24-1A0A075B6N3 115 aa8.93□□□□□ -0.98
GTF3A-209ENST00000640289 I3L3M4 83 aa8.93□□□□□ -0.98
GTF3A-209ENST00000640289 PPP1R17O96001 155 aa8.93□□□□□ -0.98
GTF3A-209ENST00000640289 PPBPP02775 128 aa8.93□□□□□ -0.98
GTF3A-209ENST00000640289 GAGE6Q13070 117 aa8.93□□□□□ -0.98
GTF3A-209ENST00000640289 KIAA1644Q3SXP7 199 aa8.93□□□□□ -0.98
GTF3A-209ENST00000640289 CBLN2Q8IUK8 224 aa8.93□□□□□ -0.98
GTF3A-209ENST00000640289 PRELID3AQ96N28 172 aa8.93□□□□□ -0.98
GTF3A-209ENST00000640289 TRBV27A0A0K0K1C4 114 aa8.92□□□□□ -0.98
GTF3A-209ENST00000640289 TMEM262E9PQX1 116 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms