RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 RPP21Q9H633 154 aaKnown RBP1.95□□□□□ -2.1
CCDC7-213ENST00000639290 ZNF492Q9P255 531 aa1.95□□□□□ -2.1
CCDC7-213ENST00000639290 TRAPPC2LQ9UL33 140 aa1.95□□□□□ -2.1
CCDC7-213ENST00000639290 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.94□□□□□ -2.1
CCDC7-213ENST00000639290 GSTZ1O43708 216 aaPredicted RBP1.94□□□□□ -2.1
CCDC7-213ENST00000639290 IGKV1-39P01597 117 aa1.94□□□□□ -2.1
CCDC7-213ENST00000639290 IGKV1D-39P04432 117 aa1.94□□□□□ -2.1
CCDC7-213ENST00000639290 COX4I1P13073 169 aa1.94□□□□□ -2.1
CCDC7-213ENST00000639290 G6PCP35575 357 aa1.94□□□□□ -2.1
CCDC7-213ENST00000639290 RPS27P42677 84 aaKnown RBP1.94□□□□□ -2.1
CCDC7-213ENST00000639290 NUDT2P50583 147 aa1.94□□□□□ -2.1
CCDC7-213ENST00000639290 FXYD6P3P58550 94 aa1.94□□□□□ -2.1
CCDC7-213ENST00000639290 DEFA1P59665 94 aa1.94□□□□□ -2.1
CCDC7-213ENST00000639290 Q0VG73 95 aa1.94□□□□□ -2.1
CCDC7-213ENST00000639290 SCGB2B2Q4G0G5 96 aa1.94□□□□□ -2.1
CCDC7-213ENST00000639290 ZFP1Q6P2D0 407 aa1.94□□□□□ -2.1
CCDC7-213ENST00000639290 AMTNQ6UX39 209 aa1.94□□□□□ -2.1
CCDC7-213ENST00000639290 DNAJC9Q8WXX5 260 aa1.94□□□□□ -2.1
CCDC7-213ENST00000639290 SOSTQ9BQB4 213 aa1.94□□□□□ -2.1
CCDC7-213ENST00000639290 CHCHD7Q9BUK0 85 aa1.94□□□□□ -2.1
CCDC7-213ENST00000639290 C8orf17Q9NRJ1 99 aa1.94□□□□□ -2.1
CCDC7-213ENST00000639290 AK3Q9UIJ7 227 aa1.94□□□□□ -2.1
CCDC7-213ENST00000639290 BORCS7-ASMTA0A0B4J1R7 106 aa1.94□□□□□ -2.1
CCDC7-213ENST00000639290 IGKV1-6A0A0C4DH72 117 aa1.94□□□□□ -2.1
CCDC7-213ENST00000639290 ZFP92A6NM28 416 aa1.94□□□□□ -2.1
CCDC7-213ENST00000639290 A8MWL6 223 aa1.94□□□□□ -2.1
CCDC7-213ENST00000639290 H7BYZ3 331 aa1.94□□□□□ -2.1
CCDC7-213ENST00000639290 MT2AP02795 61 aa1.94□□□□□ -2.1
CCDC7-213ENST00000639290 RPS28P62857 69 aaKnown RBP1.94□□□□□ -2.1
CCDC7-213ENST00000639290 RHEBQ15382 184 aa1.94□□□□□ -2.1
CCDC7-213ENST00000639290 HMGN3Q15651 99 aa1.94□□□□□ -2.1
CCDC7-213ENST00000639290 RPL39P5Q59GN2 51 aa1.94□□□□□ -2.1
CCDC7-213ENST00000639290 RNASE13Q5GAN3 156 aaKnown RBP1.94□□□□□ -2.1
CCDC7-213ENST00000639290 KRTAP5-11Q6L8G4 156 aa1.94□□□□□ -2.1
CCDC7-213ENST00000639290 BAP18Q8IXM2 172 aa1.94□□□□□ -2.1
CCDC7-213ENST00000639290 CEND1Q8N111 149 aa1.94□□□□□ -2.1
CCDC7-213ENST00000639290 LINC00471Q8N535 108 aa1.94□□□□□ -2.1
CCDC7-213ENST00000639290 OR13C8Q8NGS7 320 aa1.94□□□□□ -2.1
CCDC7-213ENST00000639290 HDHD3Q9BSH5 251 aaPredicted RBP1.94□□□□□ -2.1
CCDC7-213ENST00000639290 MRPL32Q9BYC8 188 aaKnown RBP1.94□□□□□ -2.1
CCDC7-213ENST00000639290 TMEM126AQ9H061 195 aa1.94□□□□□ -2.1
CCDC7-213ENST00000639290 SLC35B3Q9H1N7 401 aa1.94□□□□□ -2.1
CCDC7-213ENST00000639290 TAF9BQ9HBM6 251 aa1.94□□□□□ -2.1
CCDC7-213ENST00000639290 ABRACLQ9P1F3 81 aa1.94□□□□□ -2.1
CCDC7-213ENST00000639290 COPZ2Q9P299 210 aa1.94□□□□□ -2.1
CCDC7-213ENST00000639290 TRBV19A0A075B6N1 114 aa1.93□□□□□ -2.1
CCDC7-213ENST00000639290 A0A0J9YX75 114 aa1.93□□□□□ -2.1
CCDC7-213ENST00000639290 LINC00587B1AMM8 73 aa1.93□□□□□ -2.1
CCDC7-213ENST00000639290 BPY2O14599 106 aa1.93□□□□□ -2.1
CCDC7-213ENST00000639290 RBFOX2O43251 390 aaKnown RBP eCLIP1.93□□□□□ -2.1
CCDC7-213ENST00000639290 OR7C2O60412 319 aa1.93□□□□□ -2.1
CCDC7-213ENST00000639290 FAM107AO95990 144 aa1.93□□□□□ -2.1
CCDC7-213ENST00000639290 CXorf1O96002 111 aa1.93□□□□□ -2.1
CCDC7-213ENST00000639290 APELAP0DMC3 54 aa1.93□□□□□ -2.1
CCDC7-213ENST00000639290 AZU1P20160 251 aa1.93□□□□□ -2.1
CCDC7-213ENST00000639290 S100A7P31151 101 aa1.93□□□□□ -2.1
CCDC7-213ENST00000639290 WHAMMP3Q1A5X7 153 aa1.93□□□□□ -2.1
CCDC7-213ENST00000639290 LCE1AQ5T7P2 110 aa1.93□□□□□ -2.1
CCDC7-213ENST00000639290 BCL2L15Q5TBC7 163 aa1.93□□□□□ -2.1
CCDC7-213ENST00000639290 LINC01590Q5TEZ4 76 aa1.93□□□□□ -2.1
CCDC7-213ENST00000639290 LAIR2Q6ISS4 152 aa1.93□□□□□ -2.1
CCDC7-213ENST00000639290 Q6ZS49 121 aa1.93□□□□□ -2.1
CCDC7-213ENST00000639290 C12orf45Q8N5I9 185 aaPredicted RBP1.93□□□□□ -2.1
CCDC7-213ENST00000639290 RHOXF1Q8NHV9 184 aa1.93□□□□□ -2.1
CCDC7-213ENST00000639290 THEM6Q8WUY1 208 aa1.93□□□□□ -2.1
CCDC7-213ENST00000639290 C20orf27Q9GZN8 174 aa1.93□□□□□ -2.1
CCDC7-213ENST00000639290 A0A087WX48 190 aa1.93□□□□□ -2.1
CCDC7-213ENST00000639290 TRAV4A0A0B4J268 109 aa1.93□□□□□ -2.1
CCDC7-213ENST00000639290 A0A1B0GVX0 72 aa1.93□□□□□ -2.1
CCDC7-213ENST00000639290 A0A1B0GX51 115 aa1.93□□□□□ -2.1
CCDC7-213ENST00000639290 RIIAD1A6NNX1 92 aa1.93□□□□□ -2.1
CCDC7-213ENST00000639290 BET1O15155 118 aa1.93□□□□□ -2.1
CCDC7-213ENST00000639290 APCSP02743 223 aa1.93□□□□□ -2.1
CCDC7-213ENST00000639290 HOXB6P17509 224 aaKnown RBP1.93□□□□□ -2.1
CCDC7-213ENST00000639290 LGALS3P17931 250 aaKnown RBP1.93□□□□□ -2.1
CCDC7-213ENST00000639290 S100A2P29034 98 aa1.93□□□□□ -2.1
CCDC7-213ENST00000639290 SERPINB10P48595 397 aa1.93□□□□□ -2.1
CCDC7-213ENST00000639290 HIGD2BQ4VC39 106 aa1.93□□□□□ -2.1
CCDC7-213ENST00000639290 Q56UQ5 140 aa1.93□□□□□ -2.1
CCDC7-213ENST00000639290 NUP35Q8NFH5 326 aa1.93□□□□□ -2.1
CCDC7-213ENST00000639290 C2orf88Q9BSF0 95 aa1.93□□□□□ -2.1
CCDC7-213ENST00000639290 HHLA3Q9XRX5 114 aa1.93□□□□□ -2.1
CCDC7-213ENST00000639290 IGHV3-49A0A0A0MS15 119 aa1.92□□□□□ -2.1
CCDC7-213ENST00000639290 F8W036 122 aa1.92□□□□□ -2.1
CCDC7-213ENST00000639290 J3KT08 172 aa1.92□□□□□ -2.1
CCDC7-213ENST00000639290 LST1O00453 97 aa1.92□□□□□ -2.1
CCDC7-213ENST00000639290 COX7A2LO14548 114 aa1.92□□□□□ -2.1
CCDC7-213ENST00000639290 DAPP51397 102 aa1.92□□□□□ -2.1
CCDC7-213ENST00000639290 FXYD7P58549 80 aa1.92□□□□□ -2.1
CCDC7-213ENST00000639290 ZC2HC1BQ5TFG8 222 aa1.92□□□□□ -2.1
CCDC7-213ENST00000639290 PCP2Q8IVA1 136 aa1.92□□□□□ -2.1
CCDC7-213ENST00000639290 Q8N9P0 234 aaPredicted RBP1.92□□□□□ -2.1
CCDC7-213ENST00000639290 PHYHIPLQ96FC7 376 aa1.92□□□□□ -2.1
CCDC7-213ENST00000639290 VPS25Q9BRG1 176 aa1.92□□□□□ -2.1
CCDC7-213ENST00000639290 YIPF3Q9GZM5 350 aa1.92□□□□□ -2.1
CCDC7-213ENST00000639290 LAMTOR3Q9UHA4 124 aa1.92□□□□□ -2.1
CCDC7-213ENST00000639290 TMEM14AQ9Y6G1 99 aa1.92□□□□□ -2.1
CCDC7-213ENST00000639290 R4GMQ9 66 aa1.92□□□□□ -2.1
CCDC7-213ENST00000639290 A0A1B0GV90 55 aa1.92□□□□□ -2.1
CCDC7-213ENST00000639290 LINC00862A6NCI5 91 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms