RNA–Protein interactions for RNA: ENST00000638375.1

HLA-A-209, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 975 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-209ENST00000638375 ZNRF2Q8NHG8 242 aa13.41□□□□□ -0.26
HLA-A-209ENST00000638375 TRAV9-1A0A075B6T8 112 aa13.4□□□□□ -0.26
HLA-A-209ENST00000638375 S100PP25815 95 aa13.4□□□□□ -0.26
HLA-A-209ENST00000638375 FAM104BQ5XKR9 115 aa13.4□□□□□ -0.26
HLA-A-209ENST00000638375 RASL11AQ6T310 242 aa13.4□□□□□ -0.26
HLA-A-209ENST00000638375 LINC00588Q9Y4M8 146 aa13.4□□□□□ -0.26
HLA-A-209ENST00000638375 SACSQ9NZJ4 4579 aa13.4□□□□□ -0.26
HLA-A-209ENST00000638375 H7C1H1 209 aa13.39□□□□□ -0.27
HLA-A-209ENST00000638375 GAS8-AS1O95177 125 aa13.39□□□□□ -0.27
HLA-A-209ENST00000638375 RPL36AP83881 106 aaKnown RBP13.39□□□□□ -0.27
HLA-A-209ENST00000638375 LYPD5Q6UWN5 251 aa13.39□□□□□ -0.27
HLA-A-209ENST00000638375 SH2D6Q7Z4S9 175 aa13.39□□□□□ -0.27
HLA-A-209ENST00000638375 RPL36ALQ969Q0 106 aaKnown RBP13.39□□□□□ -0.27
HLA-A-209ENST00000638375 TRBV7-3A0A075B6L6 115 aa13.38□□□□□ -0.27
HLA-A-209ENST00000638375 CCL18P55774 89 aa13.38□□□□□ -0.27
HLA-A-209ENST00000638375 UBE2D3P61077 147 aa13.38□□□□□ -0.27
HLA-A-209ENST00000638375 UBE2D2P62837 147 aa13.38□□□□□ -0.27
HLA-A-209ENST00000638375 ATP6V0E2Q8NHE4 81 aa13.38□□□□□ -0.27
HLA-A-209ENST00000638375 LCE6AA0A183 80 aa13.37□□□□□ -0.27
HLA-A-209ENST00000638375 LY6G6CO95867 125 aa13.37□□□□□ -0.27
HLA-A-209ENST00000638375 MRPL51Q4U2R6 128 aaKnown RBP13.37□□□□□ -0.27
HLA-A-209ENST00000638375 UBE2DNLQ8IWF7 75 aa13.37□□□□□ -0.27
HLA-A-209ENST00000638375 RPL39LQ96EH5 51 aaKnown RBP13.37□□□□□ -0.27
HLA-A-209ENST00000638375 DNAJC30Q96LL9 226 aa13.37□□□□□ -0.27
HLA-A-209ENST00000638375 NIT2Q9NQR4 276 aa13.37□□□□□ -0.27
HLA-A-209ENST00000638375 KMT2CQ8NEZ4 4911 aaKnown RBP13.37□□□□□ -0.27
HLA-A-209ENST00000638375 SMKR1H3BMG3 65 aa13.36□□□□□ -0.27
HLA-A-209ENST00000638375 FRZBQ92765 325 aa13.36□□□□□ -0.27
HLA-A-209ENST00000638375 MRAP2Q96G30 205 aa13.36□□□□□ -0.27
HLA-A-209ENST00000638375 NCR2O95944 276 aa13.35□□□□□ -0.27
HLA-A-209ENST00000638375 TIRAPP58753 221 aa13.35□□□□□ -0.27
HLA-A-209ENST00000638375 GTSF1LQ9H1H1 148 aa13.35□□□□□ -0.27
HLA-A-209ENST00000638375 MRPS16Q9Y3D3 137 aaKnown RBP13.35□□□□□ -0.27
HLA-A-209ENST00000638375 TNFRSF18Q9Y5U5 241 aa13.35□□□□□ -0.27
HLA-A-209ENST00000638375 RPS10P46783 165 aaKnown RBP13.34□□□□□ -0.27
HLA-A-209ENST00000638375 ELOBQ15370 118 aa13.34□□□□□ -0.27
HLA-A-209ENST00000638375 TMEM136Q6ZRR5 245 aa13.34□□□□□ -0.27
HLA-A-209ENST00000638375 TGIF2-C20orf24A0A0A6YYL0 155 aa13.33□□□□□ -0.28
HLA-A-209ENST00000638375 IGHV3-38A0A0C4DH36 116 aa13.33□□□□□ -0.28
HLA-A-209ENST00000638375 OR10J3Q5JRS4 329 aa13.32□□□□□ -0.28
HLA-A-209ENST00000638375 CBLN2Q8IUK8 224 aa13.32□□□□□ -0.28
HLA-A-209ENST00000638375 NRACQ8N912 160 aa13.32□□□□□ -0.28
HLA-A-209ENST00000638375 YPEL4Q96NS1 127 aa13.32□□□□□ -0.28
HLA-A-209ENST00000638375 UPK3BQ9BT76 320 aa13.32□□□□□ -0.28
HLA-A-209ENST00000638375 TRBV6-5A0A0K0K1A5 114 aa13.31□□□□□ -0.28
HLA-A-209ENST00000638375 DNAH6Q9C0G6 4158 aa13.3□□□□□ -0.28
HLA-A-209ENST00000638375 TRBV24-1A0A075B6N3 115 aa13.3□□□□□ -0.28
HLA-A-209ENST00000638375 D6R8Y8 96 aa13.3□□□□□ -0.28
HLA-A-209ENST00000638375 CKS2P33552 79 aa13.3□□□□□ -0.28
HLA-A-209ENST00000638375 LELP1Q5T871 98 aa13.3□□□□□ -0.28
HLA-A-209ENST00000638375 DAZ4Q86SG3 579 aaKnown RBP13.3□□□□□ -0.28
HLA-A-209ENST00000638375 DAZ3Q9NR90 486 aaKnown RBP13.3□□□□□ -0.28
HLA-A-209ENST00000638375 SMCO4Q9NRQ5 59 aa13.3□□□□□ -0.28
HLA-A-209ENST00000638375 RYR2Q92736 4967 aa13.3□□□□□ -0.28
HLA-A-209ENST00000638375 GNB1LQ9BYB4 327 aa13.29□□□□□ -0.28
HLA-A-209ENST00000638375 HYDINQ4G0P3 5121 aa13.29□□□□□ -0.28
HLA-A-209ENST00000638375 SDHAF1A6NFY7 115 aa13.28□□□□□ -0.28
HLA-A-209ENST00000638375 HLA-DQA1P01909 254 aa13.28□□□□□ -0.28
HLA-A-209ENST00000638375 WFDC10BQ8IUB3 73 aa13.28□□□□□ -0.28
HLA-A-209ENST00000638375 ST20Q9HBF5 79 aa13.28□□□□□ -0.28
HLA-A-209ENST00000638375 KMT2AQ03164 3969 aa13.28□□□□□ -0.28
HLA-A-209ENST00000638375 PPBPP02775 128 aa13.27□□□□□ -0.29
HLA-A-209ENST00000638375 COX19Q49B96 90 aa13.27□□□□□ -0.29
HLA-A-209ENST00000638375 NTM-AS1Q6ZSK4 140 aa13.27□□□□□ -0.29
HLA-A-209ENST00000638375 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.27□□□□□ -0.29
HLA-A-209ENST00000638375 DEFB104AQ8WTQ1 72 aa13.27□□□□□ -0.29
HLA-A-209ENST00000638375 TMEM70Q9BUB7 260 aa13.27□□□□□ -0.29
HLA-A-209ENST00000638375 Q9H8V8 135 aa13.27□□□□□ -0.29
HLA-A-209ENST00000638375 ATP6V1G1O75348 118 aa13.26□□□□□ -0.29
HLA-A-209ENST00000638375 TNFRSF6BO95407 300 aa13.26□□□□□ -0.29
HLA-A-209ENST00000638375 PPP1R17O96001 155 aa13.26□□□□□ -0.29
HLA-A-209ENST00000638375 NPYP01303 97 aa13.26□□□□□ -0.29
HLA-A-209ENST00000638375 POLR2KP53803 58 aaKnown RBP13.26□□□□□ -0.29
HLA-A-209ENST00000638375 ORMDL3Q8N138 153 aa13.26□□□□□ -0.29
HLA-A-209ENST00000638375 TRBV6-8A0A0A6YYG3 113 aa13.25□□□□□ -0.29
HLA-A-209ENST00000638375 SUMO2P61956 95 aaKnown RBP13.25□□□□□ -0.29
HLA-A-209ENST00000638375 PRELID3AQ96N28 172 aa13.25□□□□□ -0.29
HLA-A-209ENST00000638375 IGLV2-18A0A075B6J9 118 aa13.24□□□□□ -0.29
HLA-A-209ENST00000638375 TRAV8-6A0A0B4J262 113 aa13.24□□□□□ -0.29
HLA-A-209ENST00000638375 SIVA1O15304 175 aa13.24□□□□□ -0.29
HLA-A-209ENST00000638375 SCO1O75880 301 aa13.24□□□□□ -0.29
HLA-A-209ENST00000638375 APCSP02743 223 aa13.24□□□□□ -0.29
HLA-A-209ENST00000638375 MT-ND6P03923 174 aa13.24□□□□□ -0.29
HLA-A-209ENST00000638375 KIAA1644Q3SXP7 199 aa13.24□□□□□ -0.29
HLA-A-209ENST00000638375 TMEM97Q5BJF2 176 aa13.24□□□□□ -0.29
HLA-A-209ENST00000638375 PHOX2AO14813 284 aa13.23□□□□□ -0.29
HLA-A-209ENST00000638375 C20orf78Q9BR46 151 aa13.23□□□□□ -0.29
HLA-A-209ENST00000638375 MRPL18Q9H0U6 180 aaKnown RBP13.23□□□□□ -0.29
HLA-A-209ENST00000638375 TRBV27A0A0K0K1C4 114 aa13.22□□□□□ -0.29
HLA-A-209ENST00000638375 I3L3M4 83 aa13.22□□□□□ -0.29
HLA-A-209ENST00000638375 COTL1Q14019 142 aa13.22□□□□□ -0.29
HLA-A-209ENST00000638375 DNAH10OSP0CZ25 163 aa13.21□□□□□ -0.29
HLA-A-209ENST00000638375 PMCHP20382 165 aa13.21□□□□□ -0.29
HLA-A-209ENST00000638375 RPL32P62910 135 aaKnown RBP13.21□□□□□ -0.29
HLA-A-209ENST00000638375 IQCJQ1A5X6 159 aa13.21□□□□□ -0.29
HLA-A-209ENST00000638375 Q8N3U1 123 aa13.21□□□□□ -0.29
HLA-A-209ENST00000638375 LAMTOR2Q9Y2Q5 125 aa13.21□□□□□ -0.29
HLA-A-209ENST00000638375 IGHV1-24A0A0C4DH33 117 aa13.2□□□□□ -0.3
HLA-A-209ENST00000638375 VCYO14598 125 aa13.2□□□□□ -0.3
HLA-A-209ENST00000638375 TSHBP01222 138 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms