RNA–Protein interactions for RNA: ENST00000638144.1

CLN6-225, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 576 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-225ENST00000638144 DEFB104AQ8WTQ1 72 aa8.44□□□□□ -1.06
CLN6-225ENST00000638144 ISOC2Q96AB3 205 aa8.44□□□□□ -1.06
CLN6-225ENST00000638144 CNFNQ9BYD5 112 aa8.44□□□□□ -1.06
CLN6-225ENST00000638144 DPH3P1Q9H4G8 78 aa8.44□□□□□ -1.06
CLN6-225ENST00000638144 TRAV26-2A0A0B4J265 109 aa8.43□□□□□ -1.06
CLN6-225ENST00000638144 M0QY20 66 aa8.43□□□□□ -1.06
CLN6-225ENST00000638144 DAZ4Q86SG3 579 aaKnown RBP8.43□□□□□ -1.06
CLN6-225ENST00000638144 DAZ3Q9NR90 486 aaKnown RBP8.43□□□□□ -1.06
CLN6-225ENST00000638144 NAT8Q9UHE5 227 aa8.43□□□□□ -1.06
CLN6-225ENST00000638144 HIGD1CA8MV81 97 aa8.42□□□□□ -1.06
CLN6-225ENST00000638144 FAM74A3Q4VXF1 159 aa8.42□□□□□ -1.06
CLN6-225ENST00000638144 CT83Q5H943 113 aa8.42□□□□□ -1.06
CLN6-225ENST00000638144 C10orf126Q8N4M7 172 aa8.42□□□□□ -1.06
CLN6-225ENST00000638144 DNAJC30Q96LL9 226 aa8.42□□□□□ -1.06
CLN6-225ENST00000638144 OSTCQ9NRP0 149 aa8.42□□□□□ -1.06
CLN6-225ENST00000638144 V9GYV3 84 aa8.42□□□□□ -1.06
CLN6-225ENST00000638144 DYNC1H1Q14204 4646 aaKnown RBP8.42□□□□□ -1.06
CLN6-225ENST00000638144 A0A087WWC5 75 aa8.41□□□□□ -1.06
CLN6-225ENST00000638144 KRTAP10-2P60368 255 aa8.41□□□□□ -1.06
CLN6-225ENST00000638144 RAB14P61106 215 aa8.41□□□□□ -1.06
CLN6-225ENST00000638144 IFITM2Q01629 132 aa8.41□□□□□ -1.06
CLN6-225ENST00000638144 WDR73Q6P4I2 378 aa8.41□□□□□ -1.06
CLN6-225ENST00000638144 SPATA12Q7Z6I5 190 aa8.41□□□□□ -1.06
CLN6-225ENST00000638144 NIT1Q86X76 327 aa8.41□□□□□ -1.06
CLN6-225ENST00000638144 C15orf54Q8N8G6 183 aa8.41□□□□□ -1.06
CLN6-225ENST00000638144 TSKUQ8WUA8 353 aa8.41□□□□□ -1.06
CLN6-225ENST00000638144 IBA57-AS1B1ANH7 110 aa8.4□□□□□ -1.06
CLN6-225ENST00000638144 RASL11AQ6T310 242 aa8.4□□□□□ -1.06
CLN6-225ENST00000638144 NTM-AS1Q6ZSK4 140 aa8.4□□□□□ -1.06
CLN6-225ENST00000638144 KIAA1109Q2LD37 5005 aa8.39□□□□□ -1.07
CLN6-225ENST00000638144 TRBV6-8A0A0A6YYG3 113 aa8.39□□□□□ -1.07
CLN6-225ENST00000638144 H7C1H1 209 aa8.39□□□□□ -1.07
CLN6-225ENST00000638144 K7EP13 123 aa8.39□□□□□ -1.07
CLN6-225ENST00000638144 BTF3P20290 206 aaKnown RBP8.39□□□□□ -1.07
CLN6-225ENST00000638144 NFE4Q86UQ8 179 aa8.39□□□□□ -1.07
CLN6-225ENST00000638144 GATD1Q8NB37 220 aa8.39□□□□□ -1.07
CLN6-225ENST00000638144 BORCS7Q96B45 105 aa8.39□□□□□ -1.07
CLN6-225ENST00000638144 RPL39LQ96EH5 51 aaKnown RBP8.39□□□□□ -1.07
CLN6-225ENST00000638144 CHCHD5Q9BSY4 110 aa8.39□□□□□ -1.07
CLN6-225ENST00000638144 URGCP-MRPS24S4R325 110 aa8.39□□□□□ -1.07
CLN6-225ENST00000638144 A0A1B0GUT8 65 aa8.38□□□□□ -1.07
CLN6-225ENST00000638144 C16orf90A8MZG2 172 aa8.38□□□□□ -1.07
CLN6-225ENST00000638144 GAS8-AS1O95177 125 aa8.38□□□□□ -1.07
CLN6-225ENST00000638144 MPV17L2Q567V2 206 aa8.38□□□□□ -1.07
CLN6-225ENST00000638144 SMIM15Q7Z3B0 74 aa8.38□□□□□ -1.07
CLN6-225ENST00000638144 NUP35Q8NFH5 326 aa8.38□□□□□ -1.07
CLN6-225ENST00000638144 GFRA4Q9GZZ7 299 aa8.38□□□□□ -1.07
CLN6-225ENST00000638144 SMDT1Q9H4I9 107 aa8.38□□□□□ -1.07
CLN6-225ENST00000638144 KLK12Q9UKR0 248 aa8.38□□□□□ -1.07
CLN6-225ENST00000638144 A0A087WTM6 91 aa8.37□□□□□ -1.07
CLN6-225ENST00000638144 A0A087WX48 190 aa8.37□□□□□ -1.07
CLN6-225ENST00000638144 TMEM262E9PQX1 116 aa8.37□□□□□ -1.07
CLN6-225ENST00000638144 PSCAO43653 123 aa8.37□□□□□ -1.07
CLN6-225ENST00000638144 GAGE6Q13070 117 aa8.37□□□□□ -1.07
CLN6-225ENST00000638144 CLLU1Q5K131 121 aa8.37□□□□□ -1.07
CLN6-225ENST00000638144 NIT2Q9NQR4 276 aa8.37□□□□□ -1.07
CLN6-225ENST00000638144 Q8N976 141 aa8.36□□□□□ -1.07
CLN6-225ENST00000638144 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.36□□□□□ -1.07
CLN6-225ENST00000638144 HERC2O95714 4834 aa8.35□□□□□ -1.07
CLN6-225ENST00000638144 FAM231BA6NCW3 169 aa8.35□□□□□ -1.07
CLN6-225ENST00000638144 NCR2O95944 276 aa8.35□□□□□ -1.07
CLN6-225ENST00000638144 LAGE3Q14657 143 aa8.35□□□□□ -1.07
CLN6-225ENST00000638144 KCNIP4Q6PIL6 250 aa8.35□□□□□ -1.07
CLN6-225ENST00000638144 CLPSL2Q6UWE3 100 aa8.35□□□□□ -1.07
CLN6-225ENST00000638144 AMN1Q8IY45 258 aa8.35□□□□□ -1.07
CLN6-225ENST00000638144 UBE2WQ96B02 151 aa8.35□□□□□ -1.07
CLN6-225ENST00000638144 NAT8BQ9UHF3 227 aa8.35□□□□□ -1.07
CLN6-225ENST00000638144 TRBV25-1A0A075B6N4 114 aa8.34□□□□□ -1.07
CLN6-225ENST00000638144 IGHV1-24A0A0C4DH33 117 aa8.34□□□□□ -1.07
CLN6-225ENST00000638144 SMIM27A0A1W2PRY6 76 aa8.34□□□□□ -1.07
CLN6-225ENST00000638144 SMKR1H3BMG3 65 aa8.34□□□□□ -1.07
CLN6-225ENST00000638144 LECT2O14960 151 aa8.34□□□□□ -1.07
CLN6-225ENST00000638144 RPS10P46783 165 aaKnown RBP8.34□□□□□ -1.07
CLN6-225ENST00000638144 RIGQ13278 110 aa8.34□□□□□ -1.07
CLN6-225ENST00000638144 WFDC2Q14508 124 aa8.34□□□□□ -1.07
CLN6-225ENST00000638144 ATRAIDQ6UW56 229 aa8.34□□□□□ -1.07
CLN6-225ENST00000638144 RNF185Q96GF1 192 aa8.34□□□□□ -1.07
CLN6-225ENST00000638144 DNAH5Q8TE73 4624 aa8.34□□□□□ -1.07
CLN6-225ENST00000638144 IGKV2D-24A0A075B6R9 120 aa8.33□□□□□ -1.08
CLN6-225ENST00000638144 LRCOL1A6NCL2 159 aa8.33□□□□□ -1.08
CLN6-225ENST00000638144 EREGO14944 169 aa8.33□□□□□ -1.08
CLN6-225ENST00000638144 ANGP03950 147 aaKnown RBP8.33□□□□□ -1.08
CLN6-225ENST00000638144 CAMPP49913 170 aa8.33□□□□□ -1.08
CLN6-225ENST00000638144 IQCJQ1A5X6 159 aa8.33□□□□□ -1.08
CLN6-225ENST00000638144 MRPL54Q6P161 138 aaKnown RBP8.33□□□□□ -1.08
CLN6-225ENST00000638144 MAPKAPK5-AS1Q8N8E1 139 aa8.33□□□□□ -1.08
CLN6-225ENST00000638144 TMEM191AQ9H0A3 160 aa8.33□□□□□ -1.08
CLN6-225ENST00000638144 LRP1BQ9NZR2 4599 aa8.33□□□□□ -1.08
CLN6-225ENST00000638144 TRAV8-3A0A0A6YYJ7 113 aa8.32□□□□□ -1.08
CLN6-225ENST00000638144 SDHAF1A6NFY7 115 aa8.32□□□□□ -1.08
CLN6-225ENST00000638144 RAB4AP20338 218 aa8.32□□□□□ -1.08
CLN6-225ENST00000638144 AMTP48728 403 aa8.32□□□□□ -1.08
CLN6-225ENST00000638144 RBX1P62877 108 aa8.32□□□□□ -1.08
CLN6-225ENST00000638144 COTL1Q14019 142 aa8.32□□□□□ -1.08
CLN6-225ENST00000638144 TMEM97Q5BJF2 176 aa8.32□□□□□ -1.08
CLN6-225ENST00000638144 TMEM243Q9BU79 118 aa8.32□□□□□ -1.08
CLN6-225ENST00000638144 CHCHD7Q9BUK0 85 aa8.32□□□□□ -1.08
CLN6-225ENST00000638144 CRPP02741 224 aa8.31□□□□□ -1.08
CLN6-225ENST00000638144 ADCYAP1P18509 176 aa8.31□□□□□ -1.08
CLN6-225ENST00000638144 ENHOQ6UWT2 76 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms