RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 CHD6Q8TD26 2715 aa8.99□□□□□ -0.97
CAPN3-221ENST00000638141 TRAV21A0A0B4J279 112 aa8.99□□□□□ -0.97
CAPN3-221ENST00000638141 MIAQ16674 131 aa8.99□□□□□ -0.97
CAPN3-221ENST00000638141 UPK3BQ9BT76 320 aa8.99□□□□□ -0.97
CAPN3-221ENST00000638141 TRBV7-1A0A0A6YYK4 115 aa8.99□□□□□ -0.97
CAPN3-221ENST00000638141 TRBV6-5A0A0K0K1A5 114 aa8.99□□□□□ -0.97
CAPN3-221ENST00000638141 RPL18AQ02543 176 aaKnown RBP8.99□□□□□ -0.97
CAPN3-221ENST00000638141 FAM222AQ5U5X8 452 aa8.99□□□□□ -0.97
CAPN3-221ENST00000638141 KIF25-AS1Q9Y6Z4 181 aa8.99□□□□□ -0.97
CAPN3-221ENST00000638141 ATRXP46100 2492 aa8.99□□□□□ -0.97
CAPN3-221ENST00000638141 CADP27708 2225 aa8.98□□□□□ -0.97
CAPN3-221ENST00000638141 TRBV27A0A0K0K1C4 114 aa8.98□□□□□ -0.97
CAPN3-221ENST00000638141 MGPP08493 103 aa8.98□□□□□ -0.97
CAPN3-221ENST00000638141 RHOHQ15669 191 aa8.98□□□□□ -0.97
CAPN3-221ENST00000638141 RNF182Q8N6D2 247 aa8.98□□□□□ -0.97
CAPN3-221ENST00000638141 SERP2Q8N6R1 65 aa8.98□□□□□ -0.97
CAPN3-221ENST00000638141 CCL17Q92583 94 aa8.98□□□□□ -0.97
CAPN3-221ENST00000638141 PHLDA3Q9Y5J5 127 aa8.98□□□□□ -0.97
CAPN3-221ENST00000638141 ZFYVE26Q68DK2 2539 aa8.98□□□□□ -0.97
CAPN3-221ENST00000638141 TIMM17BO60830 172 aa8.98□□□□□ -0.97
CAPN3-221ENST00000638141 LINC00315P59091 139 aa8.98□□□□□ -0.97
CAPN3-221ENST00000638141 NSUN5P1Q3KNT7 163 aa8.98□□□□□ -0.97
CAPN3-221ENST00000638141 LINC00477Q96M19 166 aa8.98□□□□□ -0.97
CAPN3-221ENST00000638141 OXTP01178 125 aa8.97□□□□□ -0.97
CAPN3-221ENST00000638141 RPL39P62891 51 aaKnown RBP8.97□□□□□ -0.97
CAPN3-221ENST00000638141 S4R3C0 116 aa8.97□□□□□ -0.97
CAPN3-221ENST00000638141 TLN1Q9Y490 2541 aaKnown RBP8.97□□□□□ -0.97
CAPN3-221ENST00000638141 IGSF10Q6WRI0 2623 aa8.97□□□□□ -0.97
CAPN3-221ENST00000638141 TRAV8-3A0A0A6YYJ7 113 aa8.97□□□□□ -0.97
CAPN3-221ENST00000638141 NDUFC2-KCTD14E9PQ53 114 aa8.97□□□□□ -0.97
CAPN3-221ENST00000638141 F8WDY8 70 aa8.97□□□□□ -0.97
CAPN3-221ENST00000638141 INAFM2P0DMQ5 153 aa8.97□□□□□ -0.97
CAPN3-221ENST00000638141 C9orf139Q6ZV77 190 aa8.97□□□□□ -0.97
CAPN3-221ENST00000638141 DPM3Q9P2X0 92 aa8.97□□□□□ -0.97
CAPN3-221ENST00000638141 S100A4P26447 101 aaKnown RBP8.96□□□□□ -0.98
CAPN3-221ENST00000638141 C4orf26Q17RF5 130 aa8.95□□□□□ -0.98
CAPN3-221ENST00000638141 PRR9Q5T870 116 aa8.95□□□□□ -0.98
CAPN3-221ENST00000638141 FDCSPQ8NFU4 85 aa8.95□□□□□ -0.98
CAPN3-221ENST00000638141 EEF1AKMT3Q96AZ1 226 aa8.95□□□□□ -0.98
CAPN3-221ENST00000638141 PRORYQ9H606 182 aa8.95□□□□□ -0.98
CAPN3-221ENST00000638141 TRAV41A0A0B4J266 112 aa8.95□□□□□ -0.98
CAPN3-221ENST00000638141 COX7A2LO14548 114 aa8.95□□□□□ -0.98
CAPN3-221ENST00000638141 COX7A1P24310 79 aa8.95□□□□□ -0.98
CAPN3-221ENST00000638141 APRG1Q8IVJ8 170 aa8.95□□□□□ -0.98
CAPN3-221ENST00000638141 U3KQE9 123 aa8.95□□□□□ -0.98
CAPN3-221ENST00000638141 IGHV3-30-3P0DP02 117 aa8.94□□□□□ -0.98
CAPN3-221ENST00000638141 CYSTM1Q9H1C7 97 aa8.94□□□□□ -0.98
CAPN3-221ENST00000638141 PLCE1Q9P212 2302 aa8.94□□□□□ -0.98
CAPN3-221ENST00000638141 KMT2BQ9UMN6 2715 aaPredicted RBP8.94□□□□□ -0.98
CAPN3-221ENST00000638141 SPRY2O43597 315 aa8.94□□□□□ -0.98
CAPN3-221ENST00000638141 MALP21145 153 aa8.94□□□□□ -0.98
CAPN3-221ENST00000638141 RNASE4P34096 147 aaKnown RBP8.94□□□□□ -0.98
CAPN3-221ENST00000638141 HRCT1Q6UXD1 115 aa8.94□□□□□ -0.98
CAPN3-221ENST00000638141 ZFAND2AQ8N6M9 145 aa8.94□□□□□ -0.98
CAPN3-221ENST00000638141 FAM110DQ8TAY7 271 aaPredicted RBP8.94□□□□□ -0.98
CAPN3-221ENST00000638141 RNASE6Q93091 150 aaKnown RBP8.94□□□□□ -0.98
CAPN3-221ENST00000638141 FAM215AQ9Y5M1 114 aa8.94□□□□□ -0.98
CAPN3-221ENST00000638141 PRRC2AP48634 2157 aaKnown RBP8.93□□□□□ -0.98
CAPN3-221ENST00000638141 ITLN2Q8WWU7 325 aaPredicted RBP8.93□□□□□ -0.98
CAPN3-221ENST00000638141 PRO0628Q9UI54 55 aa8.93□□□□□ -0.98
CAPN3-221ENST00000638141 SPTA1P02549 2419 aa8.93□□□□□ -0.98
CAPN3-221ENST00000638141 TRAV13-1A0A0B4J241 112 aa8.93□□□□□ -0.98
CAPN3-221ENST00000638141 CLPSL1A2RUU4 121 aa8.93□□□□□ -0.98
CAPN3-221ENST00000638141 BEAN1Q3B7T3 259 aa8.93□□□□□ -0.98
CAPN3-221ENST00000638141 ADAMTSL4-AS1Q5T5F5 129 aa8.93□□□□□ -0.98
CAPN3-221ENST00000638141 LY6G5BQ8NDX9 201 aa8.93□□□□□ -0.98
CAPN3-221ENST00000638141 FAM19A4Q96LR4 140 aa8.93□□□□□ -0.98
CAPN3-221ENST00000638141 JPT2Q9H910 190 aa8.93□□□□□ -0.98
CAPN3-221ENST00000638141 PYGO1Q9Y3Y4 419 aa8.93□□□□□ -0.98
CAPN3-221ENST00000638141 PRSS2P07478 247 aa8.92□□□□□ -0.98
CAPN3-221ENST00000638141 RNASE3P12724 160 aaKnown RBP8.92□□□□□ -0.98
CAPN3-221ENST00000638141 DAZ2Q13117 558 aaKnown RBP8.92□□□□□ -0.98
CAPN3-221ENST00000638141 SUMO4Q6EEV6 95 aa8.92□□□□□ -0.98
CAPN3-221ENST00000638141 Q6JHZ5 121 aa8.92□□□□□ -0.98
CAPN3-221ENST00000638141 DAZ4Q86SG3 579 aaKnown RBP8.92□□□□□ -0.98
CAPN3-221ENST00000638141 Q8N6K4 173 aa8.92□□□□□ -0.98
CAPN3-221ENST00000638141 DAZ1Q9NQZ3 744 aaKnown RBP8.92□□□□□ -0.98
CAPN3-221ENST00000638141 DAZ3Q9NR90 486 aaKnown RBP8.92□□□□□ -0.98
CAPN3-221ENST00000638141 ARHGAP32A7KAX9 2087 aa8.92□□□□□ -0.98
CAPN3-221ENST00000638141 IGHV1-58A0A0C4DH39 117 aa8.92□□□□□ -0.98
CAPN3-221ENST00000638141 ODF3BA8MYP8 253 aa8.91□□□□□ -0.98
CAPN3-221ENST00000638141 EPM2AB3EWF7 344 aa8.91□□□□□ -0.98
CAPN3-221ENST00000638141 IGHV3-23P01764 117 aa8.91□□□□□ -0.98
CAPN3-221ENST00000638141 MRPS36P82909 103 aaKnown RBP8.91□□□□□ -0.98
CAPN3-221ENST00000638141 NDPQ00604 133 aa8.91□□□□□ -0.98
CAPN3-221ENST00000638141 CFAP46Q8IYW2 2715 aa8.91□□□□□ -0.98
CAPN3-221ENST00000638141 IGHV3OR16-10A0A075B7F0 116 aa8.91□□□□□ -0.98
CAPN3-221ENST00000638141 FAM27E3Q08E93 113 aa8.91□□□□□ -0.98
CAPN3-221ENST00000638141 ZNF415Q09FC8 603 aa8.91□□□□□ -0.98
CAPN3-221ENST00000638141 DSCR8Q96T75 97 aa8.91□□□□□ -0.98
CAPN3-221ENST00000638141 NDUFA12Q9UI09 145 aa8.91□□□□□ -0.98
CAPN3-221ENST00000638141 NDUFC2O95298 119 aa8.9□□□□□ -0.98
CAPN3-221ENST00000638141 TIRAPP58753 221 aa8.9□□□□□ -0.98
CAPN3-221ENST00000638141 C20orf203Q8NBC4 194 aa8.9□□□□□ -0.98
CAPN3-221ENST00000638141 ICE1Q9Y2F5 2266 aa8.9□□□□□ -0.99
CAPN3-221ENST00000638141 A0A0J9YXV3 536 aa8.9□□□□□ -0.99
CAPN3-221ENST00000638141 M0R1W7 72 aa8.9□□□□□ -0.99
CAPN3-221ENST00000638141 C16orf92Q96LL3 132 aa8.9□□□□□ -0.99
CAPN3-221ENST00000638141 C22orf24Q9Y442 160 aa8.9□□□□□ -0.99
CAPN3-221ENST00000638141 MUC4Q99102 2169 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms